RNA–Protein interactions for RNA: ENST00000559397.5

TPM1-219, Transcript of tropomyosin 1, humanhuman

TSL 2 BASIC

Gene TPM1, Length 1,655 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-219ENST00000559397 HIGD2BQ4VC39 106 aa10.82□□□□□ -0.68
TPM1-219ENST00000559397 LINC00336Q6ZUF6 198 aa10.82□□□□□ -0.68
TPM1-219ENST00000559397 ARL17AQ8IVW1 177 aa10.82□□□□□ -0.68
TPM1-219ENST00000559397 C9orf116Q5BN46 136 aaPredicted RBP10.82□□□□□ -0.68
TPM1-219ENST00000559397 C6orf48Q9UBA6 75 aa10.8□□□□□ -0.68
TPM1-219ENST00000559397 TRBV30A0A0K0K1B3 111 aa10.79□□□□□ -0.68
TPM1-219ENST00000559397 FABP2P12104 132 aa10.79□□□□□ -0.68
TPM1-219ENST00000559397 UBE2V1Q13404 147 aa10.79□□□□□ -0.68
TPM1-219ENST00000559397 SND1-IT1Q9HBX3 110 aa10.79□□□□□ -0.68
TPM1-219ENST00000559397 DYNC1H1Q14204 4646 aaKnown RBP10.79□□□□□ -0.68
TPM1-219ENST00000559397 DNAH8Q96JB1 4490 aa10.79□□□□□ -0.68
TPM1-219ENST00000559397 Q8N814 137 aa10.79□□□□□ -0.68
TPM1-219ENST00000559397 CAMK2N2Q96S95 79 aa10.79□□□□□ -0.68
TPM1-219ENST00000559397 PKHD1P08F94 4074 aa10.78□□□□□ -0.68
TPM1-219ENST00000559397 C14orf177Q52M58 125 aa10.77□□□□□ -0.69
TPM1-219ENST00000559397 Q6ZRU5 148 aa10.77□□□□□ -0.69
TPM1-219ENST00000559397 K7EP34 96 aa10.76□□□□□ -0.69
TPM1-219ENST00000559397 IGKV2-28A0A075B6P5 120 aa10.76□□□□□ -0.69
TPM1-219ENST00000559397 GAGE10A6NGK3 116 aa10.76□□□□□ -0.69
TPM1-219ENST00000559397 IGKV2D-28P01615 120 aa10.76□□□□□ -0.69
TPM1-219ENST00000559397 SPCS1Q9Y6A9 102 aa10.76□□□□□ -0.69
TPM1-219ENST00000559397 RPL13AP40429 203 aaKnown RBP10.75□□□□□ -0.69
TPM1-219ENST00000559397 A0A1B0GVY2 172 aa10.74□□□□□ -0.69
TPM1-219ENST00000559397 SYCNQ0VAF6 134 aa10.74□□□□□ -0.69
TPM1-219ENST00000559397 GTF2H5Q6ZYL4 71 aa10.74□□□□□ -0.69
TPM1-219ENST00000559397 LRP1BQ9NZR2 4599 aa10.74□□□□□ -0.69
TPM1-219ENST00000559397 H7C2G1 150 aa10.73□□□□□ -0.69
TPM1-219ENST00000559397 NDUFC2O95298 119 aa10.73□□□□□ -0.69
TPM1-219ENST00000559397 SLPIP03973 132 aa10.73□□□□□ -0.69
TPM1-219ENST00000559397 IGLV2-33A0A075B6J2 118 aaPredicted RBP10.73□□□□□ -0.69
TPM1-219ENST00000559397 TRAV13-2A0A0B4J235 113 aa10.73□□□□□ -0.69
TPM1-219ENST00000559397 LINC00337Q8N6G1 96 aa10.73□□□□□ -0.69
TPM1-219ENST00000559397 RNF151Q2KHN1 245 aa10.72□□□□□ -0.69
TPM1-219ENST00000559397 KRTAP10-2P60368 255 aa10.71□□□□□ -0.69
TPM1-219ENST00000559397 Q1RN00 199 aa10.71□□□□□ -0.69
TPM1-219ENST00000559397 LYRM7Q5U5X0 104 aa10.71□□□□□ -0.69
TPM1-219ENST00000559397 FUSP35637 526 aaKnown RBP eCLIP10.7□□□□□ -0.7
TPM1-219ENST00000559397 EPPK1P58107 5090 aaKnown RBP10.7□□□□□ -0.7
TPM1-219ENST00000559397 NDUFC2-KCTD14E9PQ53 114 aa10.69□□□□□ -0.7
TPM1-219ENST00000559397 TRIAP1O43715 76 aa10.69□□□□□ -0.7
TPM1-219ENST00000559397 PSMB2P49721 201 aa10.69□□□□□ -0.7
TPM1-219ENST00000559397 CNBPP62633 177 aaKnown RBP10.69□□□□□ -0.7
TPM1-219ENST00000559397 CARD19Q96LW7 228 aa10.69□□□□□ -0.7
TPM1-219ENST00000559397 Q8NDZ9 215 aa10.69□□□□□ -0.7
TPM1-219ENST00000559397 TLX1NBP0CAT3 122 aa10.67□□□□□ -0.7
TPM1-219ENST00000559397 TRBV20-1A0A075B6N2 111 aa10.66□□□□□ -0.7
TPM1-219ENST00000559397 SCGB1C2P0DMR2 95 aa10.66□□□□□ -0.7
TPM1-219ENST00000559397 TCL1BO95988 128 aa10.66□□□□□ -0.7
TPM1-219ENST00000559397 XAGE1AQ9HD64 81 aa10.66□□□□□ -0.7
TPM1-219ENST00000559397 IGLV5-52A0A0A0MRZ9 124 aa10.65□□□□□ -0.7
TPM1-219ENST00000559397 RPL28P46779 137 aaKnown RBP10.65□□□□□ -0.7
TPM1-219ENST00000559397 PRR3P79522 188 aaKnown RBP10.65□□□□□ -0.7
TPM1-219ENST00000559397 Q6ZRP5 223 aa10.65□□□□□ -0.7
TPM1-219ENST00000559397 H3BMG7 143 aa10.64□□□□□ -0.71
TPM1-219ENST00000559397 COX6CP09669 75 aa10.64□□□□□ -0.71
TPM1-219ENST00000559397 C9orf163Q8N9P6 203 aa10.64□□□□□ -0.71
TPM1-219ENST00000559397 TRBV10-2A0A0K0K1G8 114 aa10.63□□□□□ -0.71
TPM1-219ENST00000559397 SMIM11BQ8TCY0 68 aa10.62□□□□□ -0.71
TPM1-219ENST00000559397 APOBP04114 4563 aaKnown RBP10.61□□□□□ -0.71
TPM1-219ENST00000559397 VPREB1P12018 145 aa10.61□□□□□ -0.71
TPM1-219ENST00000559397 LINC01620Q4KN68 170 aa10.61□□□□□ -0.71
TPM1-219ENST00000559397 GAGE2EQ4V326 116 aa10.61□□□□□ -0.71
TPM1-219ENST00000559397 OR13C6PQ8NH95 151 aa10.61□□□□□ -0.71
TPM1-219ENST00000559397 GAGE2DQ9UEU5 116 aa10.61□□□□□ -0.71
TPM1-219ENST00000559397 TMEM126AQ9H061 195 aa10.6□□□□□ -0.71
TPM1-219ENST00000559397 NCR3O14931 201 aa10.6□□□□□ -0.71
TPM1-219ENST00000559397 C9orf129Q5T035 196 aaKnown RBP10.6□□□□□ -0.71
TPM1-219ENST00000559397 PRO0461Q9UI25 63 aa10.6□□□□□ -0.71
TPM1-219ENST00000559397 ATXN8Q156A1 80 aa10.59□□□□□ -0.71
TPM1-219ENST00000559397 IGLV6-57P01721 117 aa10.58□□□□□ -0.72
TPM1-219ENST00000559397 SDIM1Q6ZPB5 146 aa10.58□□□□□ -0.72
TPM1-219ENST00000559397 LOC107984640A0A0U1RRK4 108 aa10.57□□□□□ -0.72
TPM1-219ENST00000559397 F8W1H4 67 aa10.57□□□□□ -0.72
TPM1-219ENST00000559397 LST1O00453 97 aa10.57□□□□□ -0.72
TPM1-219ENST00000559397 RPL18AQ02543 176 aaKnown RBP10.57□□□□□ -0.72
TPM1-219ENST00000559397 CLEC2BQ92478 149 aa10.57□□□□□ -0.72
TPM1-219ENST00000559397 PLA2G2DQ9UNK4 145 aa10.57□□□□□ -0.72
TPM1-219ENST00000559397 C16orf90A8MZG2 172 aa10.56□□□□□ -0.72
TPM1-219ENST00000559397 KRTAP10-1P60331 282 aa10.56□□□□□ -0.72
TPM1-219ENST00000559397 S100A7L2Q5SY68 101 aa10.55□□□□□ -0.72
TPM1-219ENST00000559397 M0R378 163 aa10.54□□□□□ -0.72
TPM1-219ENST00000559397 H0YGX0 51 aa10.53□□□□□ -0.72
TPM1-219ENST00000559397 SMCPP49901 116 aaPredicted RBP10.53□□□□□ -0.72
TPM1-219ENST00000559397 IGLV5-37A0A075B6J1 123 aa10.52□□□□□ -0.73
TPM1-219ENST00000559397 TRBV10-3A0A0K0K1G6 114 aa10.52□□□□□ -0.73
TPM1-219ENST00000559397 GAGE2BQ13066 116 aa10.52□□□□□ -0.73
TPM1-219ENST00000559397 SERTAD4-AS1Q5TG53 156 aa10.52□□□□□ -0.73
TPM1-219ENST00000559397 MTURNQ8N3F0 131 aa10.52□□□□□ -0.73
TPM1-219ENST00000559397 FAM218AQ96MZ4 157 aa10.52□□□□□ -0.73
TPM1-219ENST00000559397 A0A096LNI7 61 aa10.51□□□□□ -0.73
TPM1-219ENST00000559397 LINC01600Q96MT4 127 aa10.51□□□□□ -0.73
TPM1-219ENST00000559397 PKIGQ9Y2B9 76 aa10.51□□□□□ -0.73
TPM1-219ENST00000559397 C9JAW5 83 aa10.5□□□□□ -0.73
TPM1-219ENST00000559397 PANO1I0J062 215 aa10.5□□□□□ -0.73
TPM1-219ENST00000559397 M0QXV9 152 aa10.5□□□□□ -0.73
TPM1-219ENST00000559397 TRACP01848 142 aa10.5□□□□□ -0.73
TPM1-219ENST00000559397 Q6ZSA8 131 aa10.5□□□□□ -0.73
TPM1-219ENST00000559397 KRTAP7-1Q8IUC3 87 aa10.5□□□□□ -0.73
TPM1-219ENST00000559397 FAM30AQ9NZY2 134 aa10.5□□□□□ -0.73
TPM1-219ENST00000559397 CHTF8P0CG12 524 aa10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 79.5 ms