RNA–Protein interactions for RNA: ENST00000559192.5

USP3-210, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 1 (best)

Gene USP3, Length 5,499 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-210ENST00000559192 A8MUN3 132 aa4.94□□□□□ -1.62
USP3-210ENST00000559192 C9orf129Q5T035 196 aaKnown RBP4.94□□□□□ -1.62
USP3-210ENST00000559192 IGF2RP11717 2491 aa4.94□□□□□ -1.62
USP3-210ENST00000559192 BDP1A6H8Y1 2624 aa4.94□□□□□ -1.62
USP3-210ENST00000559192 LINC00474Q9P2X8 69 aa4.93□□□□□ -1.62
USP3-210ENST00000559192 TLN1Q9Y490 2541 aaKnown RBP4.93□□□□□ -1.62
USP3-210ENST00000559192 A0A087WSZ3 146 aa4.93□□□□□ -1.62
USP3-210ENST00000559192 LELP1Q5T871 98 aa4.93□□□□□ -1.62
USP3-210ENST00000559192 MUC6Q6W4X9 2439 aa4.93□□□□□ -1.62
USP3-210ENST00000559192 IGLV1-51P01701 117 aa4.93□□□□□ -1.62
USP3-210ENST00000559192 KTN1-AS1Q86SY8 53 aa4.93□□□□□ -1.62
USP3-210ENST00000559192 FRYLO94915 3013 aa4.93□□□□□ -1.62
USP3-210ENST00000559192 TRAV10A0A0B4J240 114 aa4.92□□□□□ -1.62
USP3-210ENST00000559192 IGLV2-33A0A075B6J2 118 aaPredicted RBP4.92□□□□□ -1.62
USP3-210ENST00000559192 LCA10Q71F78 164 aa4.92□□□□□ -1.62
USP3-210ENST00000559192 A0A1B0GUV1 79 aa4.92□□□□□ -1.62
USP3-210ENST00000559192 FSHBP01225 129 aa4.91□□□□□ -1.62
USP3-210ENST00000559192 C7orf65Q6ZTY9 151 aa4.91□□□□□ -1.62
USP3-210ENST00000559192 COL6A3P12111 3177 aa4.91□□□□□ -1.62
USP3-210ENST00000559192 SSBP3-AS1Q7Z2R9 100 aa4.91□□□□□ -1.62
USP3-210ENST00000559192 TM2D3Q9BRN9 247 aa4.91□□□□□ -1.62
USP3-210ENST00000559192 PRLHP81277 87 aa4.9□□□□□ -1.62
USP3-210ENST00000559192 Q6ZQT0 140 aa4.9□□□□□ -1.62
USP3-210ENST00000559192 SPATA3Q8NHX4 192 aa4.9□□□□□ -1.62
USP3-210ENST00000559192 FAM208BQ5VWN6 2430 aa4.9□□□□□ -1.62
USP3-210ENST00000559192 FAM104AQ969W3 186 aa4.9□□□□□ -1.62
USP3-210ENST00000559192 ZNF462Q96JM2 2506 aa4.9□□□□□ -1.63
USP3-210ENST00000559192 CYP4F30PQ9H0H9 118 aa4.9□□□□□ -1.63
USP3-210ENST00000559192 WDFY3Q8IZQ1 3526 aa4.9□□□□□ -1.63
USP3-210ENST00000559192 KPRPQ5T749 579 aaPredicted RBP4.9□□□□□ -1.63
USP3-210ENST00000559192 ACYP2P14621 99 aa4.89□□□□□ -1.63
USP3-210ENST00000559192 Q6ZTC4 211 aa4.89□□□□□ -1.63
USP3-210ENST00000559192 SMR3AQ99954 134 aa4.89□□□□□ -1.63
USP3-210ENST00000559192 H3BS24 57 aa4.89□□□□□ -1.63
USP3-210ENST00000559192 C11orf45Q8TAV5 145 aa4.89□□□□□ -1.63
USP3-210ENST00000559192 J3QKU1 62 aa4.89□□□□□ -1.63
USP3-210ENST00000559192 PLA2G1BP04054 148 aaKnown RBP4.89□□□□□ -1.63
USP3-210ENST00000559192 C2orf48Q96LS8 159 aa4.89□□□□□ -1.63
USP3-210ENST00000559192 IGLV8-61A0A075B6I0 122 aa4.88□□□□□ -1.63
USP3-210ENST00000559192 NBEAQ8NFP9 2946 aa4.88□□□□□ -1.63
USP3-210ENST00000559192 DEFB131BA0A096LNP1 70 aa4.88□□□□□ -1.63
USP3-210ENST00000559192 WDFY4Q6ZS81 3184 aa4.87□□□□□ -1.63
USP3-210ENST00000559192 INAFM1C9JVW0 142 aa4.87□□□□□ -1.63
USP3-210ENST00000559192 Q9BRP9 147 aa4.87□□□□□ -1.63
USP3-210ENST00000559192 C6orf48Q9UBA6 75 aa4.87□□□□□ -1.63
USP3-210ENST00000559192 EGFEM1PQ0D2K5 195 aa4.87□□□□□ -1.63
USP3-210ENST00000559192 WIPF1O43516 503 aa4.86□□□□□ -1.63
USP3-210ENST00000559192 Q6ZRU5 148 aa4.86□□□□□ -1.63
USP3-210ENST00000559192 ANKRD11Q6UB99 2663 aaPredicted RBP4.86□□□□□ -1.63
USP3-210ENST00000559192 LY6G6DO95868 133 aa4.86□□□□□ -1.63
USP3-210ENST00000559192 REG3GQ6UW15 175 aa4.86□□□□□ -1.63
USP3-210ENST00000559192 FRYQ5TBA9 3013 aa4.86□□□□□ -1.63
USP3-210ENST00000559192 DOPEY1Q5JWR5 2465 aa4.86□□□□□ -1.63
USP3-210ENST00000559192 CEP295Q9C0D2 2601 aa4.86□□□□□ -1.63
USP3-210ENST00000559192 LOC110117498A0A087WWA1 95 aa4.86□□□□□ -1.63
USP3-210ENST00000559192 C7orf33Q8WU49 177 aa4.85□□□□□ -1.63
USP3-210ENST00000559192 IGKV2D-30A0A075B6S6 120 aa4.85□□□□□ -1.63
USP3-210ENST00000559192 H3BPC8 53 aa4.85□□□□□ -1.63
USP3-210ENST00000559192 IGKV2-30P06310 120 aa4.85□□□□□ -1.63
USP3-210ENST00000559192 CIRBP-AS1Q8TBR5 109 aa4.85□□□□□ -1.63
USP3-210ENST00000559192 LINC01600Q96MT4 127 aa4.85□□□□□ -1.63
USP3-210ENST00000559192 DSPP15924 2871 aaKnown RBP4.85□□□□□ -1.63
USP3-210ENST00000559192 LYPD5Q6UWN5 251 aa4.85□□□□□ -1.63
USP3-210ENST00000559192 LOC101927531A0A1B0GV80 90 aa4.84□□□□□ -1.63
USP3-210ENST00000559192 TP53AIP1Q9HCN2 124 aa4.84□□□□□ -1.63
USP3-210ENST00000559192 C16orf95Q9H693 158 aa4.84□□□□□ -1.64
USP3-210ENST00000559192 TRAV22A0A0B4J277 110 aa4.83□□□□□ -1.64
USP3-210ENST00000559192 KIAA0087Q14695 138 aa4.83□□□□□ -1.64
USP3-210ENST00000559192 ELOF1P60002 83 aaKnown RBP4.83□□□□□ -1.64
USP3-210ENST00000559192 CYSTM1Q9H1C7 97 aa4.83□□□□□ -1.64
USP3-210ENST00000559192 CACNA1AO00555 2505 aa4.83□□□□□ -1.64
USP3-210ENST00000559192 PTPN13Q12923 2485 aa4.83□□□□□ -1.64
USP3-210ENST00000559192 COA5Q86WW8 74 aa4.82□□□□□ -1.64
USP3-210ENST00000559192 M0R2N4 97 aa4.82□□□□□ -1.64
USP3-210ENST00000559192 UQCR11O14957 56 aa4.82□□□□□ -1.64
USP3-210ENST00000559192 HIVEP3Q5T1R4 2406 aa4.81□□□□□ -1.64
USP3-210ENST00000559192 MGAQ8IWI9 3026 aa4.81□□□□□ -1.64
USP3-210ENST00000559192 GIG44P09565 113 aaPredicted RBP4.81□□□□□ -1.64
USP3-210ENST00000559192 ERC2-IT1O76042 136 aa4.81□□□□□ -1.64
USP3-210ENST00000559192 PRR15Q8IV56 129 aa4.8□□□□□ -1.64
USP3-210ENST00000559192 CSNK1G2-AS1Q8NCQ2 148 aa4.8□□□□□ -1.64
USP3-210ENST00000559192 IGLV6-57P01721 117 aa4.8□□□□□ -1.64
USP3-210ENST00000559192 KLKP1Q107X0 134 aa4.8□□□□□ -1.64
USP3-210ENST00000559192 ACACBO00763 2458 aa4.8□□□□□ -1.64
USP3-210ENST00000559192 RBM12B-AS1Q9P1G2 102 aa4.79□□□□□ -1.64
USP3-210ENST00000559192 NAV2Q8IVL1 2488 aa4.79□□□□□ -1.64
USP3-210ENST00000559192 OBSCN-AS1Q96MR7 158 aa4.79□□□□□ -1.64
USP3-210ENST00000559192 NCOR2Q9Y618 2525 aa4.79□□□□□ -1.64
USP3-210ENST00000559192 H7BZZ5 65 aa4.79□□□□□ -1.64
USP3-210ENST00000559192 MIR22HGQ0VDD5 57 aa4.79□□□□□ -1.64
USP3-210ENST00000559192 ZFHX4Q86UP3 3567 aa4.78□□□□□ -1.64
USP3-210ENST00000559192 CRIPTQ9P021 101 aa4.78□□□□□ -1.64
USP3-210ENST00000559192 PKD1L2Q7Z442 2459 aa4.78□□□□□ -1.64
USP3-210ENST00000559192 SONP18583 2426 aaKnown RBP4.78□□□□□ -1.64
USP3-210ENST00000559192 ST20-AS1Q8NBB2 130 aa4.78□□□□□ -1.64
USP3-210ENST00000559192 LINC00167Q96N53 147 aa4.78□□□□□ -1.64
USP3-210ENST00000559192 A0A1B0GW54 56 aa4.77□□□□□ -1.65
USP3-210ENST00000559192 BOD1L1Q8NFC6 3051 aa4.77□□□□□ -1.65
USP3-210ENST00000559192 A0A096LNT2 108 aa4.76□□□□□ -1.65
USP3-210ENST00000559192 C22orf24Q9Y442 160 aa4.76□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 99.2 ms