RNA–Protein interactions for RNA: ENST00000558796.2

PBX1-213, Transcript of PBX homeobox 1, humanhuman

TSL 5

Gene PBX1, Length 366 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX1-213ENST00000558796 HIST1H2BMQ99879 126 aa6.68□□□□□ -1.34
PBX1-213ENST00000558796 PLNP26678 52 aa6.67□□□□□ -1.34
PBX1-213ENST00000558796 LINC00158P58513 81 aa6.67□□□□□ -1.34
PBX1-213ENST00000558796 DPM2O94777 84 aa6.66□□□□□ -1.34
PBX1-213ENST00000558796 VPREB1P12018 145 aa6.66□□□□□ -1.34
PBX1-213ENST00000558796 TSPEAR-AS2P59090 65 aa6.66□□□□□ -1.34
PBX1-213ENST00000558796 Q8NDZ9 215 aa6.66□□□□□ -1.34
PBX1-213ENST00000558796 IGKV2-28A0A075B6P5 120 aa6.65□□□□□ -1.34
PBX1-213ENST00000558796 IGKV2D-28P01615 120 aa6.65□□□□□ -1.34
PBX1-213ENST00000558796 SMIM13P0DJ93 91 aa6.65□□□□□ -1.34
PBX1-213ENST00000558796 KRTAP10-8P60410 259 aa6.65□□□□□ -1.34
PBX1-213ENST00000558796 MEIG1Q5JSS6 88 aa6.65□□□□□ -1.34
PBX1-213ENST00000558796 MAP1LC3CQ9BXW4 147 aa6.65□□□□□ -1.34
PBX1-213ENST00000558796 NDUFA12Q9UI09 145 aa6.65□□□□□ -1.34
PBX1-213ENST00000558796 UBR4Q5T4S7 5183 aa6.65□□□□□ -1.35
PBX1-213ENST00000558796 BCE1O60756 84 aa6.64□□□□□ -1.35
PBX1-213ENST00000558796 IGKCP01834 107 aa6.64□□□□□ -1.35
PBX1-213ENST00000558796 PRR26Q8N8Z3 221 aa6.64□□□□□ -1.35
PBX1-213ENST00000558796 LEPROTO15243 131 aa6.63□□□□□ -1.35
PBX1-213ENST00000558796 ZNF861PO60384 105 aa6.63□□□□□ -1.35
PBX1-213ENST00000558796 ATP6V1G1O75348 118 aa6.63□□□□□ -1.35
PBX1-213ENST00000558796 KRTAP1-4P0C5Y4 121 aa6.63□□□□□ -1.35
PBX1-213ENST00000558796 HERVK_113P61574 105 aa6.63□□□□□ -1.35
PBX1-213ENST00000558796 HERV-K104P63124 156 aa6.63□□□□□ -1.35
PBX1-213ENST00000558796 RPL24P83731 157 aaKnown RBP6.63□□□□□ -1.35
PBX1-213ENST00000558796 MYMXA0A1B0GTQ4 84 aa6.62□□□□□ -1.35
PBX1-213ENST00000558796 RPL28P46779 137 aaKnown RBP6.62□□□□□ -1.35
PBX1-213ENST00000558796 MIR7-3HGQ8N6C7 128 aa6.62□□□□□ -1.35
PBX1-213ENST00000558796 PLEKHB2Q96CS7 222 aa6.62□□□□□ -1.35
PBX1-213ENST00000558796 IGLV1-50A0A075B6I6 118 aa6.61□□□□□ -1.35
PBX1-213ENST00000558796 TMEM238C9JI98 176 aa6.61□□□□□ -1.35
PBX1-213ENST00000558796 SYS1-DBNDD2H3BUS1 97 aa6.61□□□□□ -1.35
PBX1-213ENST00000558796 J3QQQ9 107 aa6.61□□□□□ -1.35
PBX1-213ENST00000558796 LGALS3P17931 250 aaKnown RBP6.61□□□□□ -1.35
PBX1-213ENST00000558796 UBE2AP49459 152 aa6.61□□□□□ -1.35
PBX1-213ENST00000558796 NCR3O14931 201 aa6.6□□□□□ -1.35
PBX1-213ENST00000558796 BOD1L2Q8IYS8 172 aa6.6□□□□□ -1.35
PBX1-213ENST00000558796 DAND5Q8N907 189 aa6.6□□□□□ -1.35
PBX1-213ENST00000558796 PRLHP81277 87 aa6.59□□□□□ -1.35
PBX1-213ENST00000558796 KRTAP13-1Q8IUC0 172 aa6.59□□□□□ -1.35
PBX1-213ENST00000558796 TMEM126AQ9H061 195 aa6.59□□□□□ -1.35
PBX1-213ENST00000558796 LRP2P98164 4655 aa6.58□□□□□ -1.36
PBX1-213ENST00000558796 LINC00587B1AMM8 73 aa6.58□□□□□ -1.36
PBX1-213ENST00000558796 NMUP48645 174 aa6.58□□□□□ -1.36
PBX1-213ENST00000558796 FAM19A1Q7Z5A9 133 aa6.58□□□□□ -1.36
PBX1-213ENST00000558796 E9PLD3 99 aa6.57□□□□□ -1.36
PBX1-213ENST00000558796 M0R378 163 aa6.57□□□□□ -1.36
PBX1-213ENST00000558796 C3orf79P0CE67 100 aa6.57□□□□□ -1.36
PBX1-213ENST00000558796 COA6Q5JTJ3 125 aaKnown RBP6.57□□□□□ -1.36
PBX1-213ENST00000558796 LINC01545Q5VT33 79 aa6.57□□□□□ -1.36
PBX1-213ENST00000558796 PET117Q6UWS5 81 aa6.57□□□□□ -1.36
PBX1-213ENST00000558796 KRTDAPP60985 99 aa6.56□□□□□ -1.36
PBX1-213ENST00000558796 RPL13AP40429 203 aaKnown RBP6.55□□□□□ -1.36
PBX1-213ENST00000558796 ANAPC11Q9NYG5 84 aa6.55□□□□□ -1.36
PBX1-213ENST00000558796 A0A087X002 238 aa6.54□□□□□ -1.36
PBX1-213ENST00000558796 A0A0J9YXY3 114 aa6.54□□□□□ -1.36
PBX1-213ENST00000558796 S100A1P23297 94 aa6.54□□□□□ -1.36
PBX1-213ENST00000558796 NPC2P61916 151 aa6.54□□□□□ -1.36
PBX1-213ENST00000558796 MIEN1Q9BRT3 115 aa6.54□□□□□ -1.36
PBX1-213ENST00000558796 IGKV2D-26A0A0A0MRZ7 120 aa6.53□□□□□ -1.36
PBX1-213ENST00000558796 TRBV10-3A0A0K0K1G6 114 aa6.53□□□□□ -1.36
PBX1-213ENST00000558796 PRYO14603 147 aa6.53□□□□□ -1.36
PBX1-213ENST00000558796 LOC107984156A0A0G2JMH3 177 aa6.52□□□□□ -1.37
PBX1-213ENST00000558796 ADAMTSL4-AS1Q5T5F5 129 aa6.52□□□□□ -1.37
PBX1-213ENST00000558796 SOSTDC1Q6X4U4 206 aa6.52□□□□□ -1.37
PBX1-213ENST00000558796 ARL17AQ8IVW1 177 aa6.52□□□□□ -1.37
PBX1-213ENST00000558796 HIGD2AQ9BW72 106 aa6.52□□□□□ -1.37
PBX1-213ENST00000558796 TTTY13Q9BZ97 58 aa6.52□□□□□ -1.37
PBX1-213ENST00000558796 C20orf202A1L168 122 aa6.51□□□□□ -1.37
PBX1-213ENST00000558796 ZNF815PA8K554 130 aa6.51□□□□□ -1.37
PBX1-213ENST00000558796 EIF4EBP3O60516 100 aaPredicted RBP6.51□□□□□ -1.37
PBX1-213ENST00000558796 CRYGAP11844 174 aa6.51□□□□□ -1.37
PBX1-213ENST00000558796 ATOH7Q8N100 152 aa6.51□□□□□ -1.37
PBX1-213ENST00000558796 SPANXB1Q9NS25 103 aaPredicted RBP6.51□□□□□ -1.37
PBX1-213ENST00000558796 ETDCA0A1B0GVM5 59 aa6.5□□□□□ -1.37
PBX1-213ENST00000558796 DDTP30046 118 aa6.5□□□□□ -1.37
PBX1-213ENST00000558796 CTAG1AP78358 180 aa6.5□□□□□ -1.37
PBX1-213ENST00000558796 LITAFQ99732 161 aa6.5□□□□□ -1.37
PBX1-213ENST00000558796 KCNQ1DNQ9H478 68 aa6.5□□□□□ -1.37
PBX1-213ENST00000558796 TRBV10-2A0A0K0K1G8 114 aa6.49□□□□□ -1.37
PBX1-213ENST00000558796 SPRR1AP35321 89 aa6.49□□□□□ -1.37
PBX1-213ENST00000558796 KRTAP13-2Q52LG2 175 aa6.49□□□□□ -1.37
PBX1-213ENST00000558796 TYMSOSQ8TAI1 123 aa6.49□□□□□ -1.37
PBX1-213ENST00000558796 LPAP08519 4548 aa6.49□□□□□ -1.37
PBX1-213ENST00000558796 RNF213Q63HN8 5207 aa6.48□□□□□ -1.37
PBX1-213ENST00000558796 NDUFC2O95298 119 aa6.48□□□□□ -1.37
PBX1-213ENST00000558796 ANKRD39Q53RE8 183 aa6.48□□□□□ -1.37
PBX1-213ENST00000558796 S100A7L2Q5SY68 101 aa6.48□□□□□ -1.37
PBX1-213ENST00000558796 HIST3H2BBQ8N257 126 aa6.48□□□□□ -1.37
PBX1-213ENST00000558796 LINC00337Q8N6G1 96 aa6.48□□□□□ -1.37
PBX1-213ENST00000558796 KRTAP4-16G5E9R7 235 aaPredicted RBP6.47□□□□□ -1.37
PBX1-213ENST00000558796 TIMM17BO60830 172 aa6.47□□□□□ -1.37
PBX1-213ENST00000558796 S100A12P80511 92 aa6.47□□□□□ -1.37
PBX1-213ENST00000558796 FAM229BQ4G0N7 80 aa6.47□□□□□ -1.37
PBX1-213ENST00000558796 LINC00308Q8TCZ7 52 aa6.47□□□□□ -1.37
PBX1-213ENST00000558796 TSPAN13O95857 204 aa6.46□□□□□ -1.38
PBX1-213ENST00000558796 S100A2P29034 98 aa6.46□□□□□ -1.38
PBX1-213ENST00000558796 SPRR4Q96PI1 79 aa6.46□□□□□ -1.38
PBX1-213ENST00000558796 HIST1H2BLQ99880 126 aa6.46□□□□□ -1.38
PBX1-213ENST00000558796 TRAV23DV6A0A075B6W5 121 aa6.45□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 67.7 ms