RNA–Protein interactions for RNA: ENST00000558532.1

HERC1-203, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 3

Gene HERC1, Length 581 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-203ENST00000558532 CEP250Q9BV73 2442 aa2.11□□□□□ -2.07
HERC1-203ENST00000558532 LYRM9A8MSI8 78 aa2.11□□□□□ -2.07
HERC1-203ENST00000558532 COX7BP24311 80 aa2.11□□□□□ -2.07
HERC1-203ENST00000558532 DEFB131AP59861 70 aa2.11□□□□□ -2.07
HERC1-203ENST00000558532 C6orf99Q4VX62 202 aa2.11□□□□□ -2.07
HERC1-203ENST00000558532 CD164L2Q6UWJ8 174 aa2.11□□□□□ -2.07
HERC1-203ENST00000558532 TYMSOSQ8TAI1 123 aa2.11□□□□□ -2.07
HERC1-203ENST00000558532 UBE2E2Q96LR5 201 aa2.11□□□□□ -2.07
HERC1-203ENST00000558532 KRTAP4-4Q9BYR3 166 aa2.11□□□□□ -2.07
HERC1-203ENST00000558532 C11orf68Q9H3H3 251 aaKnown RBP2.11□□□□□ -2.07
HERC1-203ENST00000558532 SPTBN1Q01082 2364 aaKnown RBP2.1□□□□□ -2.07
HERC1-203ENST00000558532 EP300Q09472 2414 aaPredicted RBP2.1□□□□□ -2.07
HERC1-203ENST00000558532 PCNX1Q96RV3 2341 aa2.1□□□□□ -2.07
HERC1-203ENST00000558532 IGLV4-60A0A075B6I1 120 aa2.1□□□□□ -2.07
HERC1-203ENST00000558532 TRBV6-8A0A0A6YYG3 113 aa2.1□□□□□ -2.07
HERC1-203ENST00000558532 LINC00959A0A1B0GUT2 108 aa2.1□□□□□ -2.07
HERC1-203ENST00000558532 H3BUX3 64 aa2.1□□□□□ -2.07
HERC1-203ENST00000558532 UBE2L6O14933 153 aa2.1□□□□□ -2.07
HERC1-203ENST00000558532 DNAH10OSP0CZ25 163 aa2.1□□□□□ -2.07
HERC1-203ENST00000558532 HAMPP81172 84 aa2.1□□□□□ -2.07
HERC1-203ENST00000558532 REG3GQ6UW15 175 aa2.1□□□□□ -2.07
HERC1-203ENST00000558532 Q8NDZ9 215 aa2.1□□□□□ -2.07
HERC1-203ENST00000558532 TOMM7Q9P0U1 55 aa2.1□□□□□ -2.07
HERC1-203ENST00000558532 TRIOBPQ9H2D6 2365 aa2.1□□□□□ -2.07
HERC1-203ENST00000558532 SMG1Q96Q15 3661 aaKnown RBP2.1□□□□□ -2.07
HERC1-203ENST00000558532 MAP1BP46821 2468 aaKnown RBP2.1□□□□□ -2.07
HERC1-203ENST00000558532 RP1L1Q8IWN7 2480 aaPredicted RBP2.1□□□□□ -2.07
HERC1-203ENST00000558532 ZFHX3Q15911 3703 aa2.09□□□□□ -2.07
HERC1-203ENST00000558532 DMDP11532 3685 aa2.09□□□□□ -2.07
HERC1-203ENST00000558532 KALRNO60229 2985 aa2.09□□□□□ -2.07
HERC1-203ENST00000558532 CR1P17927 2039 aa2.09□□□□□ -2.07
HERC1-203ENST00000558532 GVQW2A0A096LPI5 108 aaPredicted RBP2.09□□□□□ -2.07
HERC1-203ENST00000558532 TRAV22A0A0B4J277 110 aa2.09□□□□□ -2.07
HERC1-203ENST00000558532 A8MU10 97 aa2.09□□□□□ -2.07
HERC1-203ENST00000558532 KRTAP12-2P59991 146 aa2.09□□□□□ -2.07
HERC1-203ENST00000558532 ELOF1P60002 83 aaKnown RBP2.09□□□□□ -2.07
HERC1-203ENST00000558532 KRTAP5-4Q6L8H1 288 aa2.09□□□□□ -2.07
HERC1-203ENST00000558532 Q6ZQY7 126 aa2.09□□□□□ -2.07
HERC1-203ENST00000558532 KTN1-AS1Q86SY8 53 aa2.09□□□□□ -2.07
HERC1-203ENST00000558532 CSNK1G2-AS1Q8NCQ2 148 aa2.09□□□□□ -2.07
HERC1-203ENST00000558532 DEFB124Q8NES8 71 aa2.09□□□□□ -2.07
HERC1-203ENST00000558532 LINC00588Q9Y4M8 146 aa2.09□□□□□ -2.07
HERC1-203ENST00000558532 CELSR3Q9NYQ7 3312 aa2.09□□□□□ -2.08
HERC1-203ENST00000558532 HRNRQ86YZ3 2850 aaPredicted RBP2.08□□□□□ -2.08
HERC1-203ENST00000558532 TRGV1A0A0A0MS02 117 aa2.08□□□□□ -2.08
HERC1-203ENST00000558532 PRM2P04554 102 aa2.08□□□□□ -2.08
HERC1-203ENST00000558532 DAD1P61803 113 aa2.08□□□□□ -2.08
HERC1-203ENST00000558532 UBE2BP63146 152 aa2.08□□□□□ -2.08
HERC1-203ENST00000558532 LY6EQ16553 131 aa2.08□□□□□ -2.08
HERC1-203ENST00000558532 Q5VV11 94 aa2.08□□□□□ -2.08
HERC1-203ENST00000558532 BRD3OSQ6XYD6 125 aa2.08□□□□□ -2.08
HERC1-203ENST00000558532 PHF5AQ7RTV0 110 aaKnown RBP2.08□□□□□ -2.08
HERC1-203ENST00000558532 SPANXA2-OT1Q8N9U9 137 aa2.08□□□□□ -2.08
HERC1-203ENST00000558532 C1orf64Q8NEQ6 169 aa2.08□□□□□ -2.08
HERC1-203ENST00000558532 LINC01006Q8NI28 216 aa2.08□□□□□ -2.08
HERC1-203ENST00000558532 C16orf74Q96GX8 76 aa2.08□□□□□ -2.08
HERC1-203ENST00000558532 CACNA1HO95180 2353 aa2.08□□□□□ -2.08
HERC1-203ENST00000558532 NCOR1O75376 2440 aa2.08□□□□□ -2.08
HERC1-203ENST00000558532 BSNQ9UPA5 3926 aa2.08□□□□□ -2.08
HERC1-203ENST00000558532 PRRC2CQ9Y520 2896 aaKnown RBP2.08□□□□□ -2.08
HERC1-203ENST00000558532 OTOGLQ3ZCN5 2332 aa2.07□□□□□ -2.08
HERC1-203ENST00000558532 ZFHX4Q86UP3 3567 aa2.07□□□□□ -2.08
HERC1-203ENST00000558532 IGLV5-48A0A075B6I7 105 aa2.07□□□□□ -2.08
HERC1-203ENST00000558532 TRGV2A0A075B6R0 118 aa2.07□□□□□ -2.08
HERC1-203ENST00000558532 TRGV4A0A0C4DH28 118 aa2.07□□□□□ -2.08
HERC1-203ENST00000558532 LOC101927531A0A1B0GV80 90 aa2.07□□□□□ -2.08
HERC1-203ENST00000558532 RPL37AP8A6NKH3 93 aa2.07□□□□□ -2.08
HERC1-203ENST00000558532 PSCAO43653 123 aa2.07□□□□□ -2.08
HERC1-203ENST00000558532 NDUFB1O75438 58 aa2.07□□□□□ -2.08
HERC1-203ENST00000558532 GIG44P09565 113 aaPredicted RBP2.07□□□□□ -2.08
HERC1-203ENST00000558532 PRR3P79522 188 aaKnown RBP2.07□□□□□ -2.08
HERC1-203ENST00000558532 SYCNQ0VAF6 134 aa2.07□□□□□ -2.08
HERC1-203ENST00000558532 C10orf99Q6UWK7 81 aa2.07□□□□□ -2.08
HERC1-203ENST00000558532 C4orf3Q8WVX3 66 aa2.07□□□□□ -2.08
HERC1-203ENST00000558532 DIRC1Q969H9 104 aa2.07□□□□□ -2.08
HERC1-203ENST00000558532 Q9BRP9 147 aa2.07□□□□□ -2.08
HERC1-203ENST00000558532 HIGD2AQ9BW72 106 aa2.07□□□□□ -2.08
HERC1-203ENST00000558532 ZNF702PQ9H963 129 aa2.07□□□□□ -2.08
HERC1-203ENST00000558532 COL6A6A6NMZ7 2263 aa2.06□□□□□ -2.08
HERC1-203ENST00000558532 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP2.06□□□□□ -2.08
HERC1-203ENST00000558532 A6NN06 94 aa2.06□□□□□ -2.08
HERC1-203ENST00000558532 ZNF73O43830 326 aaPredicted RBP2.06□□□□□ -2.08
HERC1-203ENST00000558532 NDUFS5O43920 106 aa2.06□□□□□ -2.08
HERC1-203ENST00000558532 MSMBP08118 114 aa2.06□□□□□ -2.08
HERC1-203ENST00000558532 HTN1P15515 57 aa2.06□□□□□ -2.08
HERC1-203ENST00000558532 UBE2AP49459 152 aa2.06□□□□□ -2.08
HERC1-203ENST00000558532 DEFB112Q30KQ8 113 aa2.06□□□□□ -2.08
HERC1-203ENST00000558532 SCXQ7RTU7 201 aa2.06□□□□□ -2.08
HERC1-203ENST00000558532 LIMD2Q9BT23 127 aa2.06□□□□□ -2.08
HERC1-203ENST00000558532 KCNQ1DNQ9H478 68 aa2.06□□□□□ -2.08
HERC1-203ENST00000558532 DMXL2Q8TDJ6 3036 aa2.06□□□□□ -2.08
HERC1-203ENST00000558532 ANKRD11Q6UB99 2663 aaPredicted RBP2.05□□□□□ -2.08
HERC1-203ENST00000558532 ATRXP46100 2492 aa2.05□□□□□ -2.08
HERC1-203ENST00000558532 IGLV2-33A0A075B6J2 118 aaPredicted RBP2.05□□□□□ -2.08
HERC1-203ENST00000558532 ETDCA0A1B0GVM5 59 aa2.05□□□□□ -2.08
HERC1-203ENST00000558532 C16orf90A8MZG2 172 aa2.05□□□□□ -2.08
HERC1-203ENST00000558532 H3BPC8 53 aa2.05□□□□□ -2.08
HERC1-203ENST00000558532 CMC4P56277 68 aaPredicted RBP2.05□□□□□ -2.08
HERC1-203ENST00000558532 ATP11AUNQ6ZP68 121 aa2.05□□□□□ -2.08
HERC1-203ENST00000558532 MRPL55Q7Z7F7 128 aaKnown RBP2.05□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 71.3 ms