RNA–Protein interactions for RNA: ENST00000558439.5

AP4E1-202, Transcript of adaptor related protein complex 4 subunit epsilon 1, humanhuman

TSL 1 (best)

Gene AP4E1, Length 4,165 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP4E1-202ENST00000558439 IL17DQ8TAD2 202 aa10.69□□□□□ -0.7
AP4E1-202ENST00000558439 UPK3BQ9BT76 320 aa10.69□□□□□ -0.7
AP4E1-202ENST00000558439 COX17Q14061 63 aa10.69□□□□□ -0.7
AP4E1-202ENST00000558439 USP17L23D6RBM5 183 aa10.68□□□□□ -0.7
AP4E1-202ENST00000558439 TRBV10-3A0A0K0K1G6 114 aa10.68□□□□□ -0.7
AP4E1-202ENST00000558439 C10orf25Q5T742 122 aa10.67□□□□□ -0.7
AP4E1-202ENST00000558439 APCP25054 2843 aa10.67□□□□□ -0.7
AP4E1-202ENST00000558439 CUBNO60494 3623 aa10.67□□□□□ -0.7
AP4E1-202ENST00000558439 ETDCA0A1B0GVM5 59 aa10.67□□□□□ -0.7
AP4E1-202ENST00000558439 NANOS2P60321 138 aaKnown RBP10.67□□□□□ -0.7
AP4E1-202ENST00000558439 UBE2BP63146 152 aa10.67□□□□□ -0.7
AP4E1-202ENST00000558439 Q6ZTC4 211 aa10.67□□□□□ -0.7
AP4E1-202ENST00000558439 WFDC10BQ8IUB3 73 aa10.66□□□□□ -0.7
AP4E1-202ENST00000558439 KLK5Q9Y337 293 aaPredicted RBP10.66□□□□□ -0.7
AP4E1-202ENST00000558439 C20orf197Q8N268 126 aa10.66□□□□□ -0.7
AP4E1-202ENST00000558439 F8WEM9 126 aa10.64□□□□□ -0.71
AP4E1-202ENST00000558439 NREPQ16612 68 aa10.64□□□□□ -0.71
AP4E1-202ENST00000558439 CCKP06307 115 aa10.64□□□□□ -0.71
AP4E1-202ENST00000558439 NOTCH1P46531 2555 aa10.64□□□□□ -0.71
AP4E1-202ENST00000558439 ZNF73O43830 326 aaPredicted RBP10.63□□□□□ -0.71
AP4E1-202ENST00000558439 A0A0J9YWU9 116 aa10.62□□□□□ -0.71
AP4E1-202ENST00000558439 SYCNQ0VAF6 134 aa10.62□□□□□ -0.71
AP4E1-202ENST00000558439 LYPD5Q6UWN5 251 aa10.62□□□□□ -0.71
AP4E1-202ENST00000558439 KRTAP10-3P60369 221 aa10.62□□□□□ -0.71
AP4E1-202ENST00000558439 TRBV7-7A0A0K0K1E9 115 aa10.62□□□□□ -0.71
AP4E1-202ENST00000558439 COX7CP15954 63 aa10.62□□□□□ -0.71
AP4E1-202ENST00000558439 SMCR5Q8TEV8 140 aa10.62□□□□□ -0.71
AP4E1-202ENST00000558439 Q6JHZ5 121 aa10.6□□□□□ -0.71
AP4E1-202ENST00000558439 FAM19A3Q7Z5A8 133 aa10.6□□□□□ -0.71
AP4E1-202ENST00000558439 IGKV2-24A0A0C4DH68 120 aa10.6□□□□□ -0.71
AP4E1-202ENST00000558439 FAM19A1Q7Z5A9 133 aa10.6□□□□□ -0.71
AP4E1-202ENST00000558439 NDUFC2O95298 119 aa10.59□□□□□ -0.71
AP4E1-202ENST00000558439 KRTAP1-1Q07627 177 aa10.59□□□□□ -0.71
AP4E1-202ENST00000558439 RMI2Q96E14 147 aa10.59□□□□□ -0.71
AP4E1-202ENST00000558439 RPL37AP8A6NKH3 93 aa10.59□□□□□ -0.71
AP4E1-202ENST00000558439 NHLRC4P0CG21 123 aaPredicted RBP10.59□□□□□ -0.71
AP4E1-202ENST00000558439 SPATA3Q8NHX4 192 aa10.59□□□□□ -0.71
AP4E1-202ENST00000558439 C3orf84H3BNL1 204 aa10.58□□□□□ -0.71
AP4E1-202ENST00000558439 SERP2Q8N6R1 65 aa10.58□□□□□ -0.71
AP4E1-202ENST00000558439 FUSP35637 526 aaKnown RBP eCLIP10.58□□□□□ -0.72
AP4E1-202ENST00000558439 LINC00575Q6W349 94 aa10.58□□□□□ -0.72
AP4E1-202ENST00000558439 C9orf129Q5T035 196 aaKnown RBP10.57□□□□□ -0.72
AP4E1-202ENST00000558439 PDE6GP18545 87 aa10.57□□□□□ -0.72
AP4E1-202ENST00000558439 M0R378 163 aa10.56□□□□□ -0.72
AP4E1-202ENST00000558439 Q6ZRU5 148 aa10.55□□□□□ -0.72
AP4E1-202ENST00000558439 BSNQ9UPA5 3926 aa10.55□□□□□ -0.72
AP4E1-202ENST00000558439 FAM19A5Q7Z5A7 132 aaPredicted RBP10.55□□□□□ -0.72
AP4E1-202ENST00000558439 J3KT08 172 aa10.55□□□□□ -0.72
AP4E1-202ENST00000558439 Q8NAQ8 132 aa10.55□□□□□ -0.72
AP4E1-202ENST00000558439 ATP5EP2Q5VTU8 51 aa10.53□□□□□ -0.72
AP4E1-202ENST00000558439 C6orf48Q9UBA6 75 aa10.53□□□□□ -0.72
AP4E1-202ENST00000558439 LINC01561Q8N1V8 128 aa10.53□□□□□ -0.72
AP4E1-202ENST00000558439 H3BQ85 93 aa10.52□□□□□ -0.72
AP4E1-202ENST00000558439 EGFEM1PQ0D2K5 195 aa10.52□□□□□ -0.72
AP4E1-202ENST00000558439 SNURFQ9Y675 71 aa10.52□□□□□ -0.73
AP4E1-202ENST00000558439 STAB1Q9NY15 2570 aa10.51□□□□□ -0.73
AP4E1-202ENST00000558439 BPY2O14599 106 aa10.51□□□□□ -0.73
AP4E1-202ENST00000558439 KIAA0087Q14695 138 aa10.51□□□□□ -0.73
AP4E1-202ENST00000558439 HIGD2AQ9BW72 106 aa10.51□□□□□ -0.73
AP4E1-202ENST00000558439 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP10.5□□□□□ -0.73
AP4E1-202ENST00000558439 IGLV2-33A0A075B6J2 118 aaPredicted RBP10.5□□□□□ -0.73
AP4E1-202ENST00000558439 ESRGQ1W209 222 aa10.49□□□□□ -0.73
AP4E1-202ENST00000558439 COL6A5A8TX70 2615 aa10.49□□□□□ -0.73
AP4E1-202ENST00000558439 NBEAL1Q6ZS30 2694 aa10.48□□□□□ -0.73
AP4E1-202ENST00000558439 NDUFC2-KCTD14E9PQ53 114 aa10.48□□□□□ -0.73
AP4E1-202ENST00000558439 MUC7Q8TAX7 377 aa10.47□□□□□ -0.73
AP4E1-202ENST00000558439 A0A096LNI7 61 aa10.47□□□□□ -0.73
AP4E1-202ENST00000558439 Q6ZVQ6 151 aa10.46□□□□□ -0.74
AP4E1-202ENST00000558439 LINC00612Q8N6U2 182 aa10.46□□□□□ -0.74
AP4E1-202ENST00000558439 LOC107984640A0A0U1RRK4 108 aa10.45□□□□□ -0.74
AP4E1-202ENST00000558439 TRAV10A0A0B4J240 114 aa10.45□□□□□ -0.74
AP4E1-202ENST00000558439 Q8N9L7 120 aa10.42□□□□□ -0.74
AP4E1-202ENST00000558439 NIPBLQ6KC79 2804 aaeCLIP10.42□□□□□ -0.74
AP4E1-202ENST00000558439 LINC01547P58512 204 aaPredicted RBP10.42□□□□□ -0.74
AP4E1-202ENST00000558439 HIVEP1P15822 2718 aa10.4□□□□□ -0.74
AP4E1-202ENST00000558439 TMEM258P61165 79 aa10.4□□□□□ -0.75
AP4E1-202ENST00000558439 FAM236DA0A1B0GTK5 79 aa10.39□□□□□ -0.75
AP4E1-202ENST00000558439 FAM236CP0DP71 79 aa10.39□□□□□ -0.75
AP4E1-202ENST00000558439 PPDPFQ9H3Y8 114 aa10.39□□□□□ -0.75
AP4E1-202ENST00000558439 CSMD2Q7Z408 3487 aa10.38□□□□□ -0.75
AP4E1-202ENST00000558439 LINC01600Q96MT4 127 aa10.38□□□□□ -0.75
AP4E1-202ENST00000558439 Q6ZQT0 140 aa10.37□□□□□ -0.75
AP4E1-202ENST00000558439 C2orf48Q96LS8 159 aa10.37□□□□□ -0.75
AP4E1-202ENST00000558439 UBE2AP49459 152 aa10.37□□□□□ -0.75
AP4E1-202ENST00000558439 C7orf33Q8WU49 177 aa10.35□□□□□ -0.75
AP4E1-202ENST00000558439 IGLV6-57P01721 117 aa10.35□□□□□ -0.75
AP4E1-202ENST00000558439 PRR34Q9NV39 138 aa10.35□□□□□ -0.75
AP4E1-202ENST00000558439 DHRS4-AS1Q9P1J3 65 aa10.35□□□□□ -0.75
AP4E1-202ENST00000558439 KRTAP24-1Q3LI83 254 aa10.34□□□□□ -0.75
AP4E1-202ENST00000558439 Q6ZRP5 223 aa10.34□□□□□ -0.75
AP4E1-202ENST00000558439 TRAV7A0A075B6U4 112 aa10.33□□□□□ -0.76
AP4E1-202ENST00000558439 LINC01556Q5JQF7 62 aa10.33□□□□□ -0.76
AP4E1-202ENST00000558439 C1orf137Q5JT78 98 aa10.33□□□□□ -0.76
AP4E1-202ENST00000558439 VPREB1P12018 145 aa10.32□□□□□ -0.76
AP4E1-202ENST00000558439 ELOF1P60002 83 aaKnown RBP10.32□□□□□ -0.76
AP4E1-202ENST00000558439 KRTAP10-11P60412 298 aa10.32□□□□□ -0.76
AP4E1-202ENST00000558439 CRYGAP11844 174 aa10.32□□□□□ -0.76
AP4E1-202ENST00000558439 Q8NDZ9 215 aa10.31□□□□□ -0.76
AP4E1-202ENST00000558439 M0R2N4 97 aa10.31□□□□□ -0.76
AP4E1-202ENST00000558439 NSD1Q96L73 2696 aaPredicted RBP10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms