RNA–Protein interactions for RNA: ENST00000558282.5

CSPG4P12-201, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 12, humanhuman

BASIC

Gene CSPG4P12, Length 4,853 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P12-201ENST00000558282 Q9UF83 564 aa8.3□□□□□ -1.08
CSPG4P12-201ENST00000558282 PRRC2AP48634 2157 aaKnown RBP8.3□□□□□ -1.08
CSPG4P12-201ENST00000558282 C7orf33Q8WU49 177 aa8.3□□□□□ -1.08
CSPG4P12-201ENST00000558282 LRP4O75096 1905 aa8.29□□□□□ -1.08
CSPG4P12-201ENST00000558282 C10orf99Q6UWK7 81 aa8.29□□□□□ -1.08
CSPG4P12-201ENST00000558282 Q8NA96 180 aa8.29□□□□□ -1.08
CSPG4P12-201ENST00000558282 IGHV3OR16-9A0A0B4J2B5 98 aa8.29□□□□□ -1.08
CSPG4P12-201ENST00000558282 A8MUN3 132 aa8.29□□□□□ -1.08
CSPG4P12-201ENST00000558282 LCA10Q71F78 164 aa8.28□□□□□ -1.08
CSPG4P12-201ENST00000558282 Q6ZSN1 163 aa8.28□□□□□ -1.08
CSPG4P12-201ENST00000558282 C7orf65Q6ZTY9 151 aa8.28□□□□□ -1.08
CSPG4P12-201ENST00000558282 HIVEP2P31629 2446 aa8.28□□□□□ -1.08
CSPG4P12-201ENST00000558282 ODF3L2Q3SX64 289 aa8.28□□□□□ -1.08
CSPG4P12-201ENST00000558282 A8MTW9 85 aa8.27□□□□□ -1.09
CSPG4P12-201ENST00000558282 ELOF1P60002 83 aaKnown RBP8.27□□□□□ -1.09
CSPG4P12-201ENST00000558282 TRANK1O15050 2925 aa8.27□□□□□ -1.09
CSPG4P12-201ENST00000558282 IGLV2-33A0A075B6J2 118 aaPredicted RBP8.26□□□□□ -1.09
CSPG4P12-201ENST00000558282 KIAA0087Q14695 138 aa8.25□□□□□ -1.09
CSPG4P12-201ENST00000558282 COL5A1P20908 1838 aaPredicted RBP8.25□□□□□ -1.09
CSPG4P12-201ENST00000558282 DEFB116Q30KQ4 102 aa8.25□□□□□ -1.09
CSPG4P12-201ENST00000558282 ZFYVE26Q68DK2 2539 aa8.25□□□□□ -1.09
CSPG4P12-201ENST00000558282 TRAV22A0A0B4J277 110 aa8.25□□□□□ -1.09
CSPG4P12-201ENST00000558282 H7BZZ5 65 aa8.25□□□□□ -1.09
CSPG4P12-201ENST00000558282 Q8NBF4 154 aa8.24□□□□□ -1.09
CSPG4P12-201ENST00000558282 LITAFQ99732 161 aa8.24□□□□□ -1.09
CSPG4P12-201ENST00000558282 PKD1L2Q7Z442 2459 aa8.24□□□□□ -1.09
CSPG4P12-201ENST00000558282 LOC101927531A0A1B0GV80 90 aa8.24□□□□□ -1.09
CSPG4P12-201ENST00000558282 VPS13AQ96RL7 3174 aa8.23□□□□□ -1.09
CSPG4P12-201ENST00000558282 C6orf48Q9UBA6 75 aa8.23□□□□□ -1.09
CSPG4P12-201ENST00000558282 FN1P02751 2386 aaKnown RBP8.23□□□□□ -1.09
CSPG4P12-201ENST00000558282 ANKRD11Q6UB99 2663 aaPredicted RBP8.23□□□□□ -1.09
CSPG4P12-201ENST00000558282 PRR15Q8IV56 129 aa8.22□□□□□ -1.09
CSPG4P12-201ENST00000558282 EPG5Q9HCE0 2579 aa8.22□□□□□ -1.09
CSPG4P12-201ENST00000558282 SPINK1P00995 79 aa8.22□□□□□ -1.09
CSPG4P12-201ENST00000558282 TNRC18O15417 2968 aaPredicted RBP8.22□□□□□ -1.09
CSPG4P12-201ENST00000558282 EDN2P20800 178 aa8.21□□□□□ -1.09
CSPG4P12-201ENST00000558282 J3QKU1 62 aa8.21□□□□□ -1.09
CSPG4P12-201ENST00000558282 JMJD1CQ15652 2540 aa8.2□□□□□ -1.1
CSPG4P12-201ENST00000558282 ABCA12Q86UK0 2595 aa8.2□□□□□ -1.1
CSPG4P12-201ENST00000558282 WDFY4Q6ZS81 3184 aa8.19□□□□□ -1.1
CSPG4P12-201ENST00000558282 CEP192Q8TEP8 1941 aa8.19□□□□□ -1.1
CSPG4P12-201ENST00000558282 COA5Q86WW8 74 aa8.18□□□□□ -1.1
CSPG4P12-201ENST00000558282 FSHBP01225 129 aa8.18□□□□□ -1.1
CSPG4P12-201ENST00000558282 SPINT4Q6UDR6 99 aa8.17□□□□□ -1.1
CSPG4P12-201ENST00000558282 Q6ZRU5 148 aa8.17□□□□□ -1.1
CSPG4P12-201ENST00000558282 C18orf65Q6ZTR6 163 aa8.17□□□□□ -1.1
CSPG4P12-201ENST00000558282 EXPH5Q8NEV8 1989 aa8.17□□□□□ -1.1
CSPG4P12-201ENST00000558282 UQCR11O14957 56 aa8.16□□□□□ -1.1
CSPG4P12-201ENST00000558282 MDFIQ99750 246 aa8.16□□□□□ -1.1
CSPG4P12-201ENST00000558282 IGLV1-51P01701 117 aa8.15□□□□□ -1.1
CSPG4P12-201ENST00000558282 FASNP49327 2511 aaKnown RBP8.15□□□□□ -1.1
CSPG4P12-201ENST00000558282 TRBV7-4A0A0J9YYF1 115 aa8.14□□□□□ -1.11
CSPG4P12-201ENST00000558282 LY6G6DO95868 133 aa8.14□□□□□ -1.11
CSPG4P12-201ENST00000558282 CIRBP-AS1Q8TBR5 109 aa8.14□□□□□ -1.11
CSPG4P12-201ENST00000558282 LINC01600Q96MT4 127 aa8.14□□□□□ -1.11
CSPG4P12-201ENST00000558282 COL4A2P08572 1712 aa8.13□□□□□ -1.11
CSPG4P12-201ENST00000558282 C22orf24Q9Y442 160 aa8.13□□□□□ -1.11
CSPG4P12-201ENST00000558282 ZNF462Q96JM2 2506 aa8.13□□□□□ -1.11
CSPG4P12-201ENST00000558282 X6R8D5 127 aa8.12□□□□□ -1.11
CSPG4P12-201ENST00000558282 MOBPQ13875 183 aa8.12□□□□□ -1.11
CSPG4P12-201ENST00000558282 C19orf84I3L1E1 186 aa8.11□□□□□ -1.11
CSPG4P12-201ENST00000558282 LYPD5Q6UWN5 251 aa8.1□□□□□ -1.11
CSPG4P12-201ENST00000558282 DSCAMO60469 2012 aa8.1□□□□□ -1.11
CSPG4P12-201ENST00000558282 MTORP42345 2549 aa8.1□□□□□ -1.11
CSPG4P12-201ENST00000558282 Q6ZRX8 168 aa8.1□□□□□ -1.11
CSPG4P12-201ENST00000558282 LINC00476Q8WZB0 136 aa8.1□□□□□ -1.11
CSPG4P12-201ENST00000558282 REV3LO60673 3130 aa8.1□□□□□ -1.11
CSPG4P12-201ENST00000558282 PRLHP81277 87 aa8.09□□□□□ -1.11
CSPG4P12-201ENST00000558282 IGKV2D-30A0A075B6S6 120 aa8.09□□□□□ -1.11
CSPG4P12-201ENST00000558282 IGKV2-30P06310 120 aa8.09□□□□□ -1.11
CSPG4P12-201ENST00000558282 CDC42SE1Q9NRR8 79 aa8.09□□□□□ -1.11
CSPG4P12-201ENST00000558282 IGLV6-57P01721 117 aa8.08□□□□□ -1.12
CSPG4P12-201ENST00000558282 CFAP54Q96N23 3096 aa8.07□□□□□ -1.12
CSPG4P12-201ENST00000558282 Q1T7F1 81 aa8.07□□□□□ -1.12
CSPG4P12-201ENST00000558282 CPAMD8Q8IZJ3 1885 aa8.07□□□□□ -1.12
CSPG4P12-201ENST00000558282 GVQW2A0A096LPI5 108 aaPredicted RBP8.07□□□□□ -1.12
CSPG4P12-201ENST00000558282 A8MWP4 228 aa8.07□□□□□ -1.12
CSPG4P12-201ENST00000558282 SPANXA2-OT1Q8N9U9 137 aa8.07□□□□□ -1.12
CSPG4P12-201ENST00000558282 LINC00167Q96N53 147 aa8.07□□□□□ -1.12
CSPG4P12-201ENST00000558282 MUC3AQ02505 3323 aa8.07□□□□□ -1.12
CSPG4P12-201ENST00000558282 MIR22HGQ0VDD5 57 aa8.06□□□□□ -1.12
CSPG4P12-201ENST00000558282 SPTBN5Q9NRC6 3674 aaKnown RBP8.06□□□□□ -1.12
CSPG4P12-201ENST00000558282 POLQO75417 2590 aa8.06□□□□□ -1.12
CSPG4P12-201ENST00000558282 K7EQZ3 153 aa8.05□□□□□ -1.12
CSPG4P12-201ENST00000558282 FRYLO94915 3013 aa8.04□□□□□ -1.12
CSPG4P12-201ENST00000558282 LINC01556Q5JQF7 62 aa8.03□□□□□ -1.12
CSPG4P12-201ENST00000558282 ADAMTS20P59510 1910 aa8.03□□□□□ -1.12
CSPG4P12-201ENST00000558282 LRRK2Q5S007 2527 aa8.03□□□□□ -1.12
CSPG4P12-201ENST00000558282 SSBP3-AS1Q7Z2R9 100 aa8.03□□□□□ -1.12
CSPG4P12-201ENST00000558282 AVPP01185 164 aa8.02□□□□□ -1.13
CSPG4P12-201ENST00000558282 LAMA1P25391 3075 aa8.02□□□□□ -1.13
CSPG4P12-201ENST00000558282 RBM12B-AS1Q9P1G2 102 aa8.01□□□□□ -1.13
CSPG4P12-201ENST00000558282 FAM229AH3BQW9 127 aa8□□□□□ -1.13
CSPG4P12-201ENST00000558282 SPEGQ15772 3267 aa8□□□□□ -1.13
CSPG4P12-201ENST00000558282 PLA2G2AP14555 144 aa8□□□□□ -1.13
CSPG4P12-201ENST00000558282 KLK9Q2XQG4 91 aa8□□□□□ -1.13
CSPG4P12-201ENST00000558282 TET2Q6N021 2002 aaPredicted RBP7.99□□□□□ -1.13
CSPG4P12-201ENST00000558282 CELSR3Q9NYQ7 3312 aa7.99□□□□□ -1.13
CSPG4P12-201ENST00000558282 Q5XG85 94 aa7.99□□□□□ -1.13
CSPG4P12-201ENST00000558282 MRPL34Q9BQ48 92 aaKnown RBP7.98□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms