RNA–Protein interactions for RNA: ENST00000558117.1

RTF1-204, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 4

Gene RTF1, Length 552 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-204ENST00000558117 SDIM1Q6ZPB5 146 aa3.15□□□□□ -1.91
RTF1-204ENST00000558117 SPANXA2-OT1Q8N9U9 137 aa3.15□□□□□ -1.91
RTF1-204ENST00000558117 SMCO4Q9NRQ5 59 aa3.15□□□□□ -1.91
RTF1-204ENST00000558117 A0A0J9YX75 114 aa3.14□□□□□ -1.91
RTF1-204ENST00000558117 COLCA2A8K830 154 aa3.14□□□□□ -1.91
RTF1-204ENST00000558117 K7ERS5 55 aa3.14□□□□□ -1.91
RTF1-204ENST00000558117 M0R2Z0 102 aa3.14□□□□□ -1.91
RTF1-204ENST00000558117 PPBPP02775 128 aa3.14□□□□□ -1.91
RTF1-204ENST00000558117 ADM2Q7Z4H4 148 aa3.14□□□□□ -1.91
RTF1-204ENST00000558117 MIR7-3HGQ8N6C7 128 aa3.14□□□□□ -1.91
RTF1-204ENST00000558117 TCEAL7Q9BRU2 100 aa3.14□□□□□ -1.91
RTF1-204ENST00000558117 ZFP30Q9Y2G7 519 aa3.14□□□□□ -1.91
RTF1-204ENST00000558117 PHLDA3Q9Y5J5 127 aa3.14□□□□□ -1.91
RTF1-204ENST00000558117 V9GYV3 84 aa3.14□□□□□ -1.91
RTF1-204ENST00000558117 A0A087WWC5 75 aa3.13□□□□□ -1.91
RTF1-204ENST00000558117 TRAV12-3A0A0B4J271 114 aa3.13□□□□□ -1.91
RTF1-204ENST00000558117 TRBV6-1A0A0K0K1D8 114 aa3.13□□□□□ -1.91
RTF1-204ENST00000558117 C19orf71A6NCJ1 209 aa3.13□□□□□ -1.91
RTF1-204ENST00000558117 A8MWP4 228 aa3.13□□□□□ -1.91
RTF1-204ENST00000558117 GNRH2O43555 120 aa3.13□□□□□ -1.91
RTF1-204ENST00000558117 GPX1P07203 203 aa3.13□□□□□ -1.91
RTF1-204ENST00000558117 HTN1P15515 57 aa3.13□□□□□ -1.91
RTF1-204ENST00000558117 S100PP25815 95 aa3.13□□□□□ -1.91
RTF1-204ENST00000558117 ELOBQ15370 118 aa3.13□□□□□ -1.91
RTF1-204ENST00000558117 TPRXLQ17RH7 258 aa3.13□□□□□ -1.91
RTF1-204ENST00000558117 SPINK13Q1W4C9 94 aa3.13□□□□□ -1.91
RTF1-204ENST00000558117 MRPL54Q6P161 138 aaKnown RBP3.13□□□□□ -1.91
RTF1-204ENST00000558117 ZFAND2AQ8N6M9 145 aa3.13□□□□□ -1.91
RTF1-204ENST00000558117 C9orf163Q8N9P6 203 aa3.13□□□□□ -1.91
RTF1-204ENST00000558117 TMEM263Q8WUH6 116 aaKnown RBP3.13□□□□□ -1.91
RTF1-204ENST00000558117 RMI2Q96E14 147 aa3.13□□□□□ -1.91
RTF1-204ENST00000558117 OSTCQ9NRP0 149 aa3.13□□□□□ -1.91
RTF1-204ENST00000558117 RBAKDNA6NC62 111 aa3.12□□□□□ -1.91
RTF1-204ENST00000558117 FABP5P3A8MUU1 101 aa3.12□□□□□ -1.91
RTF1-204ENST00000558117 FOXA3P55318 350 aaPredicted RBP3.12□□□□□ -1.91
RTF1-204ENST00000558117 ASB16-AS1Q495Z4 193 aa3.12□□□□□ -1.91
RTF1-204ENST00000558117 Q6ZTI0 123 aa3.12□□□□□ -1.91
RTF1-204ENST00000558117 IMMP2LQ96T52 175 aa3.12□□□□□ -1.91
RTF1-204ENST00000558117 PLAC8Q9NZF1 115 aa3.12□□□□□ -1.91
RTF1-204ENST00000558117 IL36BQ9NZH7 164 aa3.12□□□□□ -1.91
RTF1-204ENST00000558117 SMIM27A0A1W2PRY6 76 aa3.11□□□□□ -1.91
RTF1-204ENST00000558117 C7orf71A4D174 169 aa3.11□□□□□ -1.91
RTF1-204ENST00000558117 IGHV3-30P01768 117 aa3.11□□□□□ -1.91
RTF1-204ENST00000558117 IGHV3-33P01772 117 aa3.11□□□□□ -1.91
RTF1-204ENST00000558117 IGHV3-30-3P0DP02 117 aa3.11□□□□□ -1.91
RTF1-204ENST00000558117 IGHV3-30-5P0DP03 117 aa3.11□□□□□ -1.91
RTF1-204ENST00000558117 SAMD13Q5VXD3 122 aa3.11□□□□□ -1.91
RTF1-204ENST00000558117 LYZL1Q6UWQ5 148 aa3.11□□□□□ -1.91
RTF1-204ENST00000558117 NUP35Q8NFH5 326 aa3.11□□□□□ -1.91
RTF1-204ENST00000558117 ATP6V0E2Q8NHE4 81 aa3.11□□□□□ -1.91
RTF1-204ENST00000558117 TSKUQ8WUA8 353 aa3.11□□□□□ -1.91
RTF1-204ENST00000558117 DNAJC30Q96LL9 226 aa3.11□□□□□ -1.91
RTF1-204ENST00000558117 PRO0255Q9UI72 69 aa3.11□□□□□ -1.91
RTF1-204ENST00000558117 TRAV4A0A0B4J268 109 aa3.1□□□□□ -1.91
RTF1-204ENST00000558117 TRAV21A0A0B4J279 112 aa3.1□□□□□ -1.91
RTF1-204ENST00000558117 SPRR5A0A1B0GTR4 108 aa3.1□□□□□ -1.91
RTF1-204ENST00000558117 HIGD1CA8MV81 97 aa3.1□□□□□ -1.91
RTF1-204ENST00000558117 H3BVH4 76 aa3.1□□□□□ -1.91
RTF1-204ENST00000558117 TRGC2P03986 189 aa3.1□□□□□ -1.91
RTF1-204ENST00000558117 ARMS2P0C7Q2 107 aa3.1□□□□□ -1.91
RTF1-204ENST00000558117 SRIP30626 198 aa3.1□□□□□ -1.91
RTF1-204ENST00000558117 SPACA4Q8TDM5 124 aa3.1□□□□□ -1.91
RTF1-204ENST00000558117 TMEM242Q9NWH2 141 aa3.1□□□□□ -1.91
RTF1-204ENST00000558117 NAT8BQ9UHF3 227 aa3.1□□□□□ -1.91
RTF1-204ENST00000558117 CYSLTR1Q9Y271 337 aa3.1□□□□□ -1.91
RTF1-204ENST00000558117 TRBV24-1A0A075B6N3 115 aa3.09□□□□□ -1.91
RTF1-204ENST00000558117 TRGV2A0A075B6R0 118 aa3.09□□□□□ -1.91
RTF1-204ENST00000558117 NDUFC2O95298 119 aa3.09□□□□□ -1.91
RTF1-204ENST00000558117 S100A4P26447 101 aaKnown RBP3.09□□□□□ -1.91
RTF1-204ENST00000558117 MRPL51Q4U2R6 128 aaKnown RBP3.09□□□□□ -1.91
RTF1-204ENST00000558117 TMEM136Q6ZRR5 245 aa3.09□□□□□ -1.91
RTF1-204ENST00000558117 KRTAP5-2Q701N4 177 aa3.09□□□□□ -1.91
RTF1-204ENST00000558117 OR10AG1Q8NH19 301 aa3.09□□□□□ -1.91
RTF1-204ENST00000558117 HHLA3Q9XRX5 114 aa3.09□□□□□ -1.91
RTF1-204ENST00000558117 TRAPPC1Q9Y5R8 145 aa3.09□□□□□ -1.91
RTF1-204ENST00000558117 IGHV3-73A0A0B4J1V6 119 aa3.08□□□□□ -1.92
RTF1-204ENST00000558117 A0A1B0GUT8 65 aa3.08□□□□□ -1.92
RTF1-204ENST00000558117 A8MUU9 505 aa3.08□□□□□ -1.92
RTF1-204ENST00000558117 C1orf196B1AJZ1 125 aa3.08□□□□□ -1.92
RTF1-204ENST00000558117 M0R2T5 61 aa3.08□□□□□ -1.92
RTF1-204ENST00000558117 TRGC1P0CF51 173 aa3.08□□□□□ -1.92
RTF1-204ENST00000558117 IGLC6P0CF74 106 aa3.08□□□□□ -1.92
RTF1-204ENST00000558117 NDUFA6P56556 154 aa3.08□□□□□ -1.92
RTF1-204ENST00000558117 KRTAP10-10P60014 251 aa3.08□□□□□ -1.92
RTF1-204ENST00000558117 HBBP68871 147 aa3.08□□□□□ -1.92
RTF1-204ENST00000558117 IQCJQ1A5X6 159 aa3.08□□□□□ -1.92
RTF1-204ENST00000558117 SPANXN1Q5VSR9 72 aa3.08□□□□□ -1.92
RTF1-204ENST00000558117 Q6AWC8 147 aa3.08□□□□□ -1.92
RTF1-204ENST00000558117 DPH3Q96FX2 82 aa3.08□□□□□ -1.92
RTF1-204ENST00000558117 LENEPQ9Y5L5 61 aa3.08□□□□□ -1.92
RTF1-204ENST00000558117 A0A1B0GW54 56 aa3.07□□□□□ -1.92
RTF1-204ENST00000558117 A6NED7 52 aa3.07□□□□□ -1.92
RTF1-204ENST00000558117 F2Z2F3 143 aa3.07□□□□□ -1.92
RTF1-204ENST00000558117 NCR2O95944 276 aa3.07□□□□□ -1.92
RTF1-204ENST00000558117 MGPP08493 103 aa3.07□□□□□ -1.92
RTF1-204ENST00000558117 RNASE3P12724 160 aaKnown RBP3.07□□□□□ -1.92
RTF1-204ENST00000558117 TSPEAR-AS2P59090 65 aa3.07□□□□□ -1.92
RTF1-204ENST00000558117 KRTAP19-6Q3LI70 58 aa3.07□□□□□ -1.92
RTF1-204ENST00000558117 LINC00483Q53H64 154 aa3.07□□□□□ -1.92
RTF1-204ENST00000558117 Q6Q795 121 aa3.07□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms