RNA–Protein interactions for RNA: ENST00000557866.1

SPG11-204, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 2

Gene SPG11, Length 468 nt, Biotype non stop decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-204ENST00000557866 C9orf116Q5BN46 136 aaPredicted RBP4.88□□□□□ -1.63
SPG11-204ENST00000557866 CASC10Q5T4H9 136 aa4.88□□□□□ -1.63
SPG11-204ENST00000557866 CFAP161Q6P656 301 aa4.88□□□□□ -1.63
SPG11-204ENST00000557866 SFTA2Q6UW10 78 aa4.88□□□□□ -1.63
SPG11-204ENST00000557866 C15orf56Q8N910 161 aa4.88□□□□□ -1.63
SPG11-204ENST00000557866 C1orf43Q9BWL3 253 aa4.88□□□□□ -1.63
SPG11-204ENST00000557866 PPDPFQ9H3Y8 114 aa4.88□□□□□ -1.63
SPG11-204ENST00000557866 Q9HAA7 133 aa4.88□□□□□ -1.63
SPG11-204ENST00000557866 PRO1854Q9UHT4 67 aa4.88□□□□□ -1.63
SPG11-204ENST00000557866 DNAH10Q8IVF4 4471 aa4.87□□□□□ -1.63
SPG11-204ENST00000557866 IGKV2D-24A0A075B6R9 120 aa4.87□□□□□ -1.63
SPG11-204ENST00000557866 K7EP34 96 aa4.87□□□□□ -1.63
SPG11-204ENST00000557866 CKS1BP61024 79 aa4.87□□□□□ -1.63
SPG11-204ENST00000557866 HIGD2BQ4VC39 106 aa4.87□□□□□ -1.63
SPG11-204ENST00000557866 KRTAP1-5Q9BYS1 174 aa4.87□□□□□ -1.63
SPG11-204ENST00000557866 IGKV2-28A0A075B6P5 120 aa4.86□□□□□ -1.63
SPG11-204ENST00000557866 IGKV2D-28P01615 120 aa4.86□□□□□ -1.63
SPG11-204ENST00000557866 FABP2P12104 132 aa4.86□□□□□ -1.63
SPG11-204ENST00000557866 C6orf48Q9UBA6 75 aa4.86□□□□□ -1.63
SPG11-204ENST00000557866 SPCS1Q9Y6A9 102 aa4.86□□□□□ -1.63
SPG11-204ENST00000557866 GVQW2A0A096LPI5 108 aaPredicted RBP4.85□□□□□ -1.63
SPG11-204ENST00000557866 LOC107984156A0A0G2JMH3 177 aa4.85□□□□□ -1.63
SPG11-204ENST00000557866 NUPR2A6NF83 97 aa4.85□□□□□ -1.63
SPG11-204ENST00000557866 GAGE10A6NGK3 116 aa4.85□□□□□ -1.63
SPG11-204ENST00000557866 H7C2G1 150 aa4.85□□□□□ -1.63
SPG11-204ENST00000557866 ARL17AQ8IVW1 177 aa4.85□□□□□ -1.63
SPG11-204ENST00000557866 COPS9Q8WXC6 57 aa4.85□□□□□ -1.63
SPG11-204ENST00000557866 FBN3Q75N90 2809 aa4.85□□□□□ -1.63
SPG11-204ENST00000557866 RPL13AP40429 203 aaKnown RBP4.84□□□□□ -1.63
SPG11-204ENST00000557866 COX17Q14061 63 aa4.84□□□□□ -1.63
SPG11-204ENST00000557866 Q8NDZ9 215 aa4.84□□□□□ -1.63
SPG11-204ENST00000557866 SND1-IT1Q9HBX3 110 aa4.84□□□□□ -1.63
SPG11-204ENST00000557866 TRIAP1O43715 76 aa4.83□□□□□ -1.64
SPG11-204ENST00000557866 Q6ZRU5 148 aa4.83□□□□□ -1.64
SPG11-204ENST00000557866 GTF2H5Q6ZYL4 71 aa4.83□□□□□ -1.64
SPG11-204ENST00000557866 UBE2DNLQ8IWF7 75 aa4.83□□□□□ -1.64
SPG11-204ENST00000557866 LINC00337Q8N6G1 96 aa4.83□□□□□ -1.64
SPG11-204ENST00000557866 C2orf48Q96LS8 159 aa4.83□□□□□ -1.64
SPG11-204ENST00000557866 TRBV30A0A0K0K1B3 111 aa4.82□□□□□ -1.64
SPG11-204ENST00000557866 USP17L23D6RBM5 183 aa4.82□□□□□ -1.64
SPG11-204ENST00000557866 TCL1BO95988 128 aa4.82□□□□□ -1.64
SPG11-204ENST00000557866 PRR3P79522 188 aaKnown RBP4.82□□□□□ -1.64
SPG11-204ENST00000557866 WFDC2Q14508 124 aa4.82□□□□□ -1.64
SPG11-204ENST00000557866 Q1RN00 199 aa4.82□□□□□ -1.64
SPG11-204ENST00000557866 RMI2Q96E14 147 aa4.82□□□□□ -1.64
SPG11-204ENST00000557866 CAMK2N2Q96S95 79 aa4.82□□□□□ -1.64
SPG11-204ENST00000557866 PRO0461Q9UI25 63 aa4.82□□□□□ -1.64
SPG11-204ENST00000557866 DNAH6Q9C0G6 4158 aa4.81□□□□□ -1.64
SPG11-204ENST00000557866 KMT2AQ03164 3969 aa4.81□□□□□ -1.64
SPG11-204ENST00000557866 H3BMG7 143 aa4.81□□□□□ -1.64
SPG11-204ENST00000557866 SCGB1C2P0DMR2 95 aa4.81□□□□□ -1.64
SPG11-204ENST00000557866 PSMB2P49721 201 aa4.81□□□□□ -1.64
SPG11-204ENST00000557866 TRAV13-2A0A0B4J235 113 aa4.8□□□□□ -1.64
SPG11-204ENST00000557866 F8WDY8 70 aa4.8□□□□□ -1.64
SPG11-204ENST00000557866 LECT2O14960 151 aa4.8□□□□□ -1.64
SPG11-204ENST00000557866 NDUFC2O95298 119 aa4.8□□□□□ -1.64
SPG11-204ENST00000557866 SYCNQ0VAF6 134 aa4.8□□□□□ -1.64
SPG11-204ENST00000557866 MUC7Q8TAX7 377 aa4.8□□□□□ -1.64
SPG11-204ENST00000557866 NBDYA0A0U1RRE5 68 aa4.79□□□□□ -1.64
SPG11-204ENST00000557866 LYRM7Q5U5X0 104 aa4.79□□□□□ -1.64
SPG11-204ENST00000557866 MTURNQ8N3F0 131 aa4.79□□□□□ -1.64
SPG11-204ENST00000557866 XAGE1AQ9HD64 81 aa4.79□□□□□ -1.64
SPG11-204ENST00000557866 DNAH2Q9P225 4427 aa4.79□□□□□ -1.64
SPG11-204ENST00000557866 TRBV20-1A0A075B6N2 111 aa4.78□□□□□ -1.64
SPG11-204ENST00000557866 NCR3O14931 201 aa4.78□□□□□ -1.64
SPG11-204ENST00000557866 Q6ZRN7 208 aaPredicted RBP4.78□□□□□ -1.64
SPG11-204ENST00000557866 Q6ZRP5 223 aa4.78□□□□□ -1.64
SPG11-204ENST00000557866 SMIM11BQ8TCY0 68 aa4.78□□□□□ -1.64
SPG11-204ENST00000557866 CLEC2BQ92478 149 aa4.78□□□□□ -1.64
SPG11-204ENST00000557866 CARD19Q96LW7 228 aa4.78□□□□□ -1.64
SPG11-204ENST00000557866 ALMS1Q8TCU4 4167 aa4.78□□□□□ -1.64
SPG11-204ENST00000557866 NDUFC2-KCTD14E9PQ53 114 aa4.77□□□□□ -1.65
SPG11-204ENST00000557866 TLX1NBP0CAT3 122 aa4.77□□□□□ -1.65
SPG11-204ENST00000557866 RPL28P46779 137 aaKnown RBP4.77□□□□□ -1.65
SPG11-204ENST00000557866 TTC32Q5I0X7 151 aa4.77□□□□□ -1.65
SPG11-204ENST00000557866 C9orf129Q5T035 196 aaKnown RBP4.77□□□□□ -1.65
SPG11-204ENST00000557866 TENM2Q9NT68 2774 aa4.77□□□□□ -1.65
SPG11-204ENST00000557866 LRCOL1A6NCL2 159 aa4.76□□□□□ -1.65
SPG11-204ENST00000557866 M0R2N4 97 aa4.76□□□□□ -1.65
SPG11-204ENST00000557866 LST1O00453 97 aa4.76□□□□□ -1.65
SPG11-204ENST00000557866 VPREB1P12018 145 aa4.76□□□□□ -1.65
SPG11-204ENST00000557866 ATXN8Q156A1 80 aa4.76□□□□□ -1.65
SPG11-204ENST00000557866 GAGE2EQ4V326 116 aa4.76□□□□□ -1.65
SPG11-204ENST00000557866 OR13C6PQ8NH95 151 aa4.76□□□□□ -1.65
SPG11-204ENST00000557866 FAM218AQ96MZ4 157 aa4.76□□□□□ -1.65
SPG11-204ENST00000557866 GAGE2DQ9UEU5 116 aa4.76□□□□□ -1.65
SPG11-204ENST00000557866 TRBV10-2A0A0K0K1G8 114 aa4.75□□□□□ -1.65
SPG11-204ENST00000557866 F8W1H4 67 aa4.75□□□□□ -1.65
SPG11-204ENST00000557866 IGLV6-57P01721 117 aa4.75□□□□□ -1.65
SPG11-204ENST00000557866 COX6CP09669 75 aa4.75□□□□□ -1.65
SPG11-204ENST00000557866 RPL18AQ02543 176 aaKnown RBP4.75□□□□□ -1.65
SPG11-204ENST00000557866 LINC01620Q4KN68 170 aa4.75□□□□□ -1.65
SPG11-204ENST00000557866 Q6ZR54 194 aa4.75□□□□□ -1.65
SPG11-204ENST00000557866 HECTD4Q9Y4D8 3996 aa4.74□□□□□ -1.65
SPG11-204ENST00000557866 DNAH17Q9UFH2 4485 aa4.74□□□□□ -1.65
SPG11-204ENST00000557866 C9JAW5 83 aa4.74□□□□□ -1.65
SPG11-204ENST00000557866 PSCAO43653 123 aa4.74□□□□□ -1.65
SPG11-204ENST00000557866 SERTAD4-AS1Q5TG53 156 aa4.74□□□□□ -1.65
SPG11-204ENST00000557866 TMEM126AQ9H061 195 aa4.74□□□□□ -1.65
SPG11-204ENST00000557866 TRBV10-3A0A0K0K1G6 114 aa4.73□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms