RNA–Protein interactions for RNA: ENST00000557477.1

PRPF39-212, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 5

Gene PRPF39, Length 724 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-212ENST00000557477 ZNF714Q96N38 554 aa2.52□□□□□ -2.01
PRPF39-212ENST00000557477 LINC00474Q9P2X8 69 aa2.52□□□□□ -2.01
PRPF39-212ENST00000557477 PRO1854Q9UHT4 67 aa2.52□□□□□ -2.01
PRPF39-212ENST00000557477 LHFPL6Q9Y693 200 aa2.52□□□□□ -2.01
PRPF39-212ENST00000557477 KIAA2026Q5HYC2 2103 aa2.51□□□□□ -2.01
PRPF39-212ENST00000557477 TRAV16A0A0A6YYK6 109 aaPredicted RBP2.51□□□□□ -2.01
PRPF39-212ENST00000557477 TRAV13-2A0A0B4J235 113 aa2.51□□□□□ -2.01
PRPF39-212ENST00000557477 FAM223BA6NKX1 122 aa2.51□□□□□ -2.01
PRPF39-212ENST00000557477 HIGD1CA8MV81 97 aa2.51□□□□□ -2.01
PRPF39-212ENST00000557477 M0R135 149 aa2.51□□□□□ -2.01
PRPF39-212ENST00000557477 COX7A2LO14548 114 aa2.51□□□□□ -2.01
PRPF39-212ENST00000557477 ARL14EPLP0DKL9 152 aa2.51□□□□□ -2.01
PRPF39-212ENST00000557477 INAFM2P0DMQ5 153 aa2.51□□□□□ -2.01
PRPF39-212ENST00000557477 KLKP1Q107X0 134 aa2.51□□□□□ -2.01
PRPF39-212ENST00000557477 CIRBPQ14011 172 aaKnown RBP2.51□□□□□ -2.01
PRPF39-212ENST00000557477 RHOHQ15669 191 aa2.51□□□□□ -2.01
PRPF39-212ENST00000557477 S100A7L2Q5SY68 101 aa2.51□□□□□ -2.01
PRPF39-212ENST00000557477 LINC01590Q5TEZ4 76 aa2.51□□□□□ -2.01
PRPF39-212ENST00000557477 LYPD5Q6UWN5 251 aa2.51□□□□□ -2.01
PRPF39-212ENST00000557477 ZNF818PQ6ZRF7 136 aa2.51□□□□□ -2.01
PRPF39-212ENST00000557477 C7orf65Q6ZTY9 151 aa2.51□□□□□ -2.01
PRPF39-212ENST00000557477 MIR7-3HGQ8N6C7 128 aa2.51□□□□□ -2.01
PRPF39-212ENST00000557477 SMCR5Q8TEV8 140 aa2.51□□□□□ -2.01
PRPF39-212ENST00000557477 ARHGAP5-AS1Q96IT6 56 aa2.51□□□□□ -2.01
PRPF39-212ENST00000557477 NPCDR1Q9BY65 106 aa2.51□□□□□ -2.01
PRPF39-212ENST00000557477 TMEM167BQ9NRX6 74 aa2.51□□□□□ -2.01
PRPF39-212ENST00000557477 ARHGAP32A7KAX9 2087 aa2.51□□□□□ -2.01
PRPF39-212ENST00000557477 NUP214P35658 2090 aaPredicted RBP2.51□□□□□ -2.01
PRPF39-212ENST00000557477 TRAV7A0A075B6U4 112 aa2.5□□□□□ -2.01
PRPF39-212ENST00000557477 TRBV30A0A0K0K1B3 111 aa2.5□□□□□ -2.01
PRPF39-212ENST00000557477 LCE6AA0A183 80 aa2.5□□□□□ -2.01
PRPF39-212ENST00000557477 M0R1W7 72 aa2.5□□□□□ -2.01
PRPF39-212ENST00000557477 LHBP01229 141 aa2.5□□□□□ -2.01
PRPF39-212ENST00000557477 TFF1P04155 84 aa2.5□□□□□ -2.01
PRPF39-212ENST00000557477 PLNP26678 52 aa2.5□□□□□ -2.01
PRPF39-212ENST00000557477 FUSP35637 526 aaKnown RBP eCLIP2.5□□□□□ -2.01
PRPF39-212ENST00000557477 MP68P56378 58 aa2.5□□□□□ -2.01
PRPF39-212ENST00000557477 EDDM3BP56851 147 aa2.5□□□□□ -2.01
PRPF39-212ENST00000557477 FXYD4P59646 89 aa2.5□□□□□ -2.01
PRPF39-212ENST00000557477 PLGLAQ15195 96 aa2.5□□□□□ -2.01
PRPF39-212ENST00000557477 ESRGQ1W209 222 aa2.5□□□□□ -2.01
PRPF39-212ENST00000557477 SFTA2Q6UW10 78 aa2.5□□□□□ -2.01
PRPF39-212ENST00000557477 C20orf197Q8N268 126 aa2.5□□□□□ -2.01
PRPF39-212ENST00000557477 TTTY13Q9BZ97 58 aa2.5□□□□□ -2.01
PRPF39-212ENST00000557477 LINC00574Q9H8X3 128 aa2.5□□□□□ -2.01
PRPF39-212ENST00000557477 MRPL35Q9NZE8 188 aaKnown RBP2.5□□□□□ -2.01
PRPF39-212ENST00000557477 IGKV1-6A0A0C4DH72 117 aa2.49□□□□□ -2.01
PRPF39-212ENST00000557477 LOC389332A0A1B0GUA5 103 aa2.49□□□□□ -2.01
PRPF39-212ENST00000557477 TMEM30CPA0ZSE6 113 aa2.49□□□□□ -2.01
PRPF39-212ENST00000557477 IGKV1-39P01597 117 aa2.49□□□□□ -2.01
PRPF39-212ENST00000557477 IGKV1-5P01602 117 aa2.49□□□□□ -2.01
PRPF39-212ENST00000557477 IGHV3-33P01772 117 aa2.49□□□□□ -2.01
PRPF39-212ENST00000557477 IGKV1D-39P04432 117 aa2.49□□□□□ -2.01
PRPF39-212ENST00000557477 COX6CP09669 75 aa2.49□□□□□ -2.01
PRPF39-212ENST00000557477 IAPPP10997 89 aa2.49□□□□□ -2.01
PRPF39-212ENST00000557477 Q1T7F1 81 aa2.49□□□□□ -2.01
PRPF39-212ENST00000557477 SPANXN5Q5MJ07 72 aa2.49□□□□□ -2.01
PRPF39-212ENST00000557477 ATP5EP2Q5VTU8 51 aa2.49□□□□□ -2.01
PRPF39-212ENST00000557477 ORMDL3Q8N138 153 aa2.49□□□□□ -2.01
PRPF39-212ENST00000557477 DYNAPQ8N1N2 210 aa2.49□□□□□ -2.01
PRPF39-212ENST00000557477 DYNLRB2Q8TF09 96 aa2.49□□□□□ -2.01
PRPF39-212ENST00000557477 SND1-IT1Q9HBX3 110 aa2.49□□□□□ -2.01
PRPF39-212ENST00000557477 R4GMQ9 66 aa2.49□□□□□ -2.01
PRPF39-212ENST00000557477 KMT2CQ8NEZ4 4911 aaKnown RBP2.49□□□□□ -2.01
PRPF39-212ENST00000557477 PLXNB1O43157 2135 aa2.48□□□□□ -2.01
PRPF39-212ENST00000557477 IGKV1D-17A0A075B6S4 117 aa2.48□□□□□ -2.01
PRPF39-212ENST00000557477 IGHV3OR16-8A0A075B7F1 116 aa2.48□□□□□ -2.01
PRPF39-212ENST00000557477 IGKV1-9A0A0C4DH69 117 aa2.48□□□□□ -2.01
PRPF39-212ENST00000557477 LINC01546A6NGU7 62 aa2.48□□□□□ -2.01
PRPF39-212ENST00000557477 F8WEM9 126 aa2.48□□□□□ -2.01
PRPF39-212ENST00000557477 H3BSH0 61 aa2.48□□□□□ -2.01
PRPF39-212ENST00000557477 BUB1B-PAK6H3BSN5 160 aa2.48□□□□□ -2.01
PRPF39-212ENST00000557477 CCL3L1P16619 93 aa2.48□□□□□ -2.01
PRPF39-212ENST00000557477 CD24P25063 80 aa2.48□□□□□ -2.01
PRPF39-212ENST00000557477 S100A4P26447 101 aaKnown RBP2.48□□□□□ -2.01
PRPF39-212ENST00000557477 RPS27P42677 84 aaKnown RBP2.48□□□□□ -2.01
PRPF39-212ENST00000557477 LINC00313P59037 77 aa2.48□□□□□ -2.01
PRPF39-212ENST00000557477 BLCAPP62952 87 aa2.48□□□□□ -2.01
PRPF39-212ENST00000557477 DEFB136Q30KP8 78 aa2.48□□□□□ -2.01
PRPF39-212ENST00000557477 MRPL51Q4U2R6 128 aaKnown RBP2.48□□□□□ -2.01
PRPF39-212ENST00000557477 GPHB5Q86YW7 130 aa2.48□□□□□ -2.01
PRPF39-212ENST00000557477 DIRC1Q969H9 104 aa2.48□□□□□ -2.01
PRPF39-212ENST00000557477 GAFA1Q96PS6 74 aa2.48□□□□□ -2.01
PRPF39-212ENST00000557477 TIMM21Q9BVV7 248 aa2.48□□□□□ -2.01
PRPF39-212ENST00000557477 KAAG1Q9UBP8 84 aa2.48□□□□□ -2.01
PRPF39-212ENST00000557477 UBE2D4Q9Y2X8 147 aa2.48□□□□□ -2.01
PRPF39-212ENST00000557477 RYR3Q15413 4870 aa2.47□□□□□ -2.01
PRPF39-212ENST00000557477 DOCK11Q5JSL3 2073 aa2.47□□□□□ -2.01
PRPF39-212ENST00000557477 TRAV12-1A0A0B4J245 112 aa2.47□□□□□ -2.01
PRPF39-212ENST00000557477 ZNF815PA8K554 130 aa2.47□□□□□ -2.01
PRPF39-212ENST00000557477 C16orf90A8MZG2 172 aa2.47□□□□□ -2.01
PRPF39-212ENST00000557477 E7EUB6 86 aa2.47□□□□□ -2.01
PRPF39-212ENST00000557477 LY6G6CO95867 125 aa2.47□□□□□ -2.01
PRPF39-212ENST00000557477 IGHV3-30P01768 117 aa2.47□□□□□ -2.01
PRPF39-212ENST00000557477 IGHV3-30-5P0DP03 117 aa2.47□□□□□ -2.01
PRPF39-212ENST00000557477 ZNF137PP52743 207 aa2.47□□□□□ -2.01
PRPF39-212ENST00000557477 C10orf99Q6UWK7 81 aa2.47□□□□□ -2.01
PRPF39-212ENST00000557477 SOSTDC1Q6X4U4 206 aa2.47□□□□□ -2.01
PRPF39-212ENST00000557477 ATP11AUNQ6ZP68 121 aa2.47□□□□□ -2.01
PRPF39-212ENST00000557477 LINC00337Q8N6G1 96 aa2.47□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms