RNA–Protein interactions for RNA: ENST00000557422.1

RTN1-208, Transcript of reticulon 1, humanhuman

TSL 3

Gene RTN1, Length 582 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN1-208ENST00000557422 ANKRD39Q53RE8 183 aa7.22□□□□□ -1.25
RTN1-208ENST00000557422 C5orf38Q86SI9 138 aa7.22□□□□□ -1.25
RTN1-208ENST00000557422 E9PLD3 99 aa7.21□□□□□ -1.26
RTN1-208ENST00000557422 SPAG11BQ08648 103 aa7.21□□□□□ -1.26
RTN1-208ENST00000557422 Q6ZUT4 128 aa7.21□□□□□ -1.26
RTN1-208ENST00000557422 FAM19A5Q7Z5A7 132 aaPredicted RBP7.21□□□□□ -1.26
RTN1-208ENST00000557422 KRTAP7-1Q8IUC3 87 aa7.21□□□□□ -1.26
RTN1-208ENST00000557422 C14orf144Q96I85 54 aa7.21□□□□□ -1.26
RTN1-208ENST00000557422 BOD1L2Q8IYS8 172 aa7.2□□□□□ -1.26
RTN1-208ENST00000557422 TRAV13-1A0A0B4J241 112 aa7.19□□□□□ -1.26
RTN1-208ENST00000557422 HERVK_113P63121 156 aa7.19□□□□□ -1.26
RTN1-208ENST00000557422 RNASE13Q5GAN3 156 aaKnown RBP7.19□□□□□ -1.26
RTN1-208ENST00000557422 GEMIN7Q9H840 131 aaKnown RBP7.19□□□□□ -1.26
RTN1-208ENST00000557422 IGLV5-45A0A087WSX0 123 aa7.18□□□□□ -1.26
RTN1-208ENST00000557422 LINC00587B1AMM8 73 aa7.18□□□□□ -1.26
RTN1-208ENST00000557422 H3BRM9 83 aa7.18□□□□□ -1.26
RTN1-208ENST00000557422 TLX1NBP0CAT3 122 aa7.18□□□□□ -1.26
RTN1-208ENST00000557422 ZNF22P17026 224 aaPredicted RBP7.18□□□□□ -1.26
RTN1-208ENST00000557422 NMUP48645 174 aa7.18□□□□□ -1.26
RTN1-208ENST00000557422 UBE2BP63146 152 aa7.18□□□□□ -1.26
RTN1-208ENST00000557422 TMEM170BQ5T4T1 132 aa7.18□□□□□ -1.26
RTN1-208ENST00000557422 C10orf25Q5T742 122 aa7.18□□□□□ -1.26
RTN1-208ENST00000557422 TMEM223A0PJW6 202 aa7.17□□□□□ -1.26
RTN1-208ENST00000557422 F8WDY8 70 aa7.17□□□□□ -1.26
RTN1-208ENST00000557422 M0QXV9 152 aa7.17□□□□□ -1.26
RTN1-208ENST00000557422 GAGE2EQ4V326 116 aa7.17□□□□□ -1.26
RTN1-208ENST00000557422 GAGE2DQ9UEU5 116 aa7.17□□□□□ -1.26
RTN1-208ENST00000557422 IGKV2D-26A0A0A0MRZ7 120 aa7.16□□□□□ -1.26
RTN1-208ENST00000557422 NDUFA1O15239 70 aa7.16□□□□□ -1.26
RTN1-208ENST00000557422 LINC00242Q5T6M2 205 aa7.16□□□□□ -1.26
RTN1-208ENST00000557422 UNQ6190/PRO20217Q6UXQ8 127 aa7.16□□□□□ -1.26
RTN1-208ENST00000557422 ORAOV1Q8WV07 137 aa7.16□□□□□ -1.26
RTN1-208ENST00000557422 PLEKHB2Q96CS7 222 aa7.16□□□□□ -1.26
RTN1-208ENST00000557422 HIGD1BQ9P298 99 aa7.16□□□□□ -1.26
RTN1-208ENST00000557422 LEPROTO15243 131 aa7.15□□□□□ -1.26
RTN1-208ENST00000557422 ZNF861PO60384 105 aa7.15□□□□□ -1.26
RTN1-208ENST00000557422 LBHQ53QV2 105 aaPredicted RBP7.15□□□□□ -1.26
RTN1-208ENST00000557422 LCE2DQ5TA82 110 aaPredicted RBP7.15□□□□□ -1.26
RTN1-208ENST00000557422 PCP2Q8IVA1 136 aa7.15□□□□□ -1.26
RTN1-208ENST00000557422 LINC00469Q8N7U9 141 aa7.15□□□□□ -1.26
RTN1-208ENST00000557422 C6orf48Q9UBA6 75 aa7.15□□□□□ -1.26
RTN1-208ENST00000557422 A0A087X002 238 aa7.14□□□□□ -1.27
RTN1-208ENST00000557422 MYMXA0A1B0GTQ4 84 aa7.14□□□□□ -1.27
RTN1-208ENST00000557422 M0R143 59 aa7.14□□□□□ -1.27
RTN1-208ENST00000557422 CTAG1AP78358 180 aa7.14□□□□□ -1.27
RTN1-208ENST00000557422 CRCT1Q9UGL9 99 aa7.14□□□□□ -1.27
RTN1-208ENST00000557422 MUC17Q685J3 4493 aa7.13□□□□□ -1.27
RTN1-208ENST00000557422 IGHV3OR16-9A0A0B4J2B5 98 aa7.13□□□□□ -1.27
RTN1-208ENST00000557422 J3QQQ9 107 aa7.13□□□□□ -1.27
RTN1-208ENST00000557422 LINC01561Q8N1V8 128 aa7.13□□□□□ -1.27
RTN1-208ENST00000557422 CDIP1Q9H305 208 aa7.13□□□□□ -1.27
RTN1-208ENST00000557422 LGALS3P17931 250 aaKnown RBP7.12□□□□□ -1.27
RTN1-208ENST00000557422 C2orf91Q6ZV80 131 aa7.12□□□□□ -1.27
RTN1-208ENST00000557422 TYMSOSQ8TAI1 123 aa7.12□□□□□ -1.27
RTN1-208ENST00000557422 RETNLBQ9BQ08 111 aa7.12□□□□□ -1.27
RTN1-208ENST00000557422 CDKN2A-AS1Q9UH64 79 aa7.12□□□□□ -1.27
RTN1-208ENST00000557422 IGLV5-39A0A0G2JS06 123 aa7.11□□□□□ -1.27
RTN1-208ENST00000557422 ZNF815PA8K554 130 aa7.11□□□□□ -1.27
RTN1-208ENST00000557422 CRYGAP11844 174 aa7.11□□□□□ -1.27
RTN1-208ENST00000557422 TAL2Q16559 108 aa7.11□□□□□ -1.27
RTN1-208ENST00000557422 C9orf129Q5T035 196 aaKnown RBP7.11□□□□□ -1.27
RTN1-208ENST00000557422 HSD52Q0P140 79 aa7.1□□□□□ -1.27
RTN1-208ENST00000557422 TPRXLQ17RH7 258 aa7.1□□□□□ -1.27
RTN1-208ENST00000557422 NDUFC2-KCTD14E9PQ53 114 aa7.09□□□□□ -1.27
RTN1-208ENST00000557422 SPINK8P0C7L1 97 aa7.09□□□□□ -1.27
RTN1-208ENST00000557422 KIAA0087Q14695 138 aa7.09□□□□□ -1.27
RTN1-208ENST00000557422 SNHG12Q9BXW3 62 aa7.09□□□□□ -1.27
RTN1-208ENST00000557422 SMIM1B2RUZ4 78 aa7.08□□□□□ -1.28
RTN1-208ENST00000557422 TSPEAR-AS2P59090 65 aa7.08□□□□□ -1.28
RTN1-208ENST00000557422 SFTA2Q6UW10 78 aa7.08□□□□□ -1.28
RTN1-208ENST00000557422 SCGB1D4Q6XE38 83 aa7.08□□□□□ -1.28
RTN1-208ENST00000557422 TTTY13Q9BZ97 58 aa7.08□□□□□ -1.28
RTN1-208ENST00000557422 IGLV7-46A0A075B6I9 117 aa7.07□□□□□ -1.28
RTN1-208ENST00000557422 TRBV30A0A0K0K1B3 111 aa7.07□□□□□ -1.28
RTN1-208ENST00000557422 SPANXB1Q9NS25 103 aaPredicted RBP7.07□□□□□ -1.28
RTN1-208ENST00000557422 ANAPC11Q9NYG5 84 aa7.07□□□□□ -1.28
RTN1-208ENST00000557422 NDUFA12Q9UI09 145 aa7.07□□□□□ -1.28
RTN1-208ENST00000557422 TIMM17BO60830 172 aa7.06□□□□□ -1.28
RTN1-208ENST00000557422 RPL28P46779 137 aaKnown RBP7.06□□□□□ -1.28
RTN1-208ENST00000557422 HERV-K104P63124 156 aa7.06□□□□□ -1.28
RTN1-208ENST00000557422 KRTAP13-2Q52LG2 175 aa7.06□□□□□ -1.28
RTN1-208ENST00000557422 COL5A1-AS1Q5SY13 56 aa7.06□□□□□ -1.28
RTN1-208ENST00000557422 BVES-AS1Q5T3Y7 98 aa7.06□□□□□ -1.28
RTN1-208ENST00000557422 C2orf82Q6UX34 121 aa7.06□□□□□ -1.28
RTN1-208ENST00000557422 Q6ZVH6 145 aa7.06□□□□□ -1.28
RTN1-208ENST00000557422 TP73-AS1Q9UF72 201 aa7.06□□□□□ -1.28
RTN1-208ENST00000557422 C22orf24Q9Y442 160 aa7.06□□□□□ -1.28
RTN1-208ENST00000557422 HINT1P49773 126 aaPredicted RBP7.05□□□□□ -1.28
RTN1-208ENST00000557422 TMEM238C9JI98 176 aa7.04□□□□□ -1.28
RTN1-208ENST00000557422 BCE1O60756 84 aa7.04□□□□□ -1.28
RTN1-208ENST00000557422 LINC01547P58512 204 aaPredicted RBP7.04□□□□□ -1.28
RTN1-208ENST00000557422 CEND1Q8N111 149 aa7.04□□□□□ -1.28
RTN1-208ENST00000557422 LINC00304Q8N9R0 145 aa7.04□□□□□ -1.28
RTN1-208ENST00000557422 COX7B2Q8TF08 81 aa7.04□□□□□ -1.28
RTN1-208ENST00000557422 HIST1H4GQ99525 98 aa7.04□□□□□ -1.28
RTN1-208ENST00000557422 A0A0J9YXY3 114 aa7.03□□□□□ -1.28
RTN1-208ENST00000557422 A6NDN8 102 aa7.03□□□□□ -1.28
RTN1-208ENST00000557422 BATFQ16520 125 aa7.03□□□□□ -1.28
RTN1-208ENST00000557422 TMEM238LA0A1B0GVL6 79 aa7.02□□□□□ -1.29
RTN1-208ENST00000557422 A6NJY4 79 aa7.02□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms