RNA–Protein interactions for RNA: ENST00000557293.5

PSEN1-221, Transcript of presenilin 1, humanhuman

TSL 2

Gene PSEN1, Length 576 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-221ENST00000557293 RPL24P83731 157 aaKnown RBP6.81□□□□□ -1.32
PSEN1-221ENST00000557293 LINC00483Q53H64 154 aa6.81□□□□□ -1.32
PSEN1-221ENST00000557293 ERASQ7Z444 233 aa6.81□□□□□ -1.32
PSEN1-221ENST00000557293 NDUFA12Q9UI09 145 aa6.81□□□□□ -1.32
PSEN1-221ENST00000557293 ZNF706Q9Y5V0 76 aaPredicted RBP6.81□□□□□ -1.32
PSEN1-221ENST00000557293 SLC25A20O43772 301 aa6.8□□□□□ -1.32
PSEN1-221ENST00000557293 ATP5LO75964 103 aa6.8□□□□□ -1.32
PSEN1-221ENST00000557293 IFITM2Q01629 132 aa6.8□□□□□ -1.32
PSEN1-221ENST00000557293 CST9LQ9H4G1 147 aa6.8□□□□□ -1.32
PSEN1-221ENST00000557293 IGLV5-39A0A0G2JS06 123 aa6.79□□□□□ -1.32
PSEN1-221ENST00000557293 KRTAP4-16G5E9R7 235 aaPredicted RBP6.79□□□□□ -1.32
PSEN1-221ENST00000557293 SSBP3-AS1Q7Z2R9 100 aa6.79□□□□□ -1.32
PSEN1-221ENST00000557293 FAM19A2Q8N3H0 131 aa6.79□□□□□ -1.32
PSEN1-221ENST00000557293 NXT2Q9NPJ8 142 aaKnown RBP6.79□□□□□ -1.32
PSEN1-221ENST00000557293 ERG28Q9UKR5 140 aa6.79□□□□□ -1.32
PSEN1-221ENST00000557293 SPRR1AP35321 89 aa6.78□□□□□ -1.32
PSEN1-221ENST00000557293 SCGB3A1Q96QR1 104 aa6.78□□□□□ -1.32
PSEN1-221ENST00000557293 FLGP20930 4061 aaPredicted RBP6.78□□□□□ -1.32
PSEN1-221ENST00000557293 M0R2T5 61 aa6.77□□□□□ -1.33
PSEN1-221ENST00000557293 MOBPQ13875 183 aa6.77□□□□□ -1.33
PSEN1-221ENST00000557293 MRPL18Q9H0U6 180 aaKnown RBP6.77□□□□□ -1.33
PSEN1-221ENST00000557293 G0S2P27469 103 aa6.76□□□□□ -1.33
PSEN1-221ENST00000557293 COX17Q14061 63 aa6.76□□□□□ -1.33
PSEN1-221ENST00000557293 ZNF625Q96I27 306 aaPredicted RBP6.76□□□□□ -1.33
PSEN1-221ENST00000557293 IGLV9-49A0A0B4J1Y8 123 aa6.75□□□□□ -1.33
PSEN1-221ENST00000557293 ERC2-IT1O76042 136 aa6.75□□□□□ -1.33
PSEN1-221ENST00000557293 GAGE2AQ6NT46 116 aa6.75□□□□□ -1.33
PSEN1-221ENST00000557293 SSPOA2VEC9 5147 aa6.75□□□□□ -1.33
PSEN1-221ENST00000557293 PRYO14603 147 aa6.73□□□□□ -1.33
PSEN1-221ENST00000557293 PMVKQ15126 192 aa6.73□□□□□ -1.33
PSEN1-221ENST00000557293 KCNQ1DNQ9H478 68 aa6.73□□□□□ -1.33
PSEN1-221ENST00000557293 LINC01546A6NGU7 62 aa6.72□□□□□ -1.33
PSEN1-221ENST00000557293 H3BRM9 83 aa6.72□□□□□ -1.33
PSEN1-221ENST00000557293 USH2AO75445 5202 aa6.72□□□□□ -1.33
PSEN1-221ENST00000557293 C9orf92A6NGG3 77 aa6.71□□□□□ -1.34
PSEN1-221ENST00000557293 IGLC3P0DOY3 106 aa6.71□□□□□ -1.34
PSEN1-221ENST00000557293 ZNF22P17026 224 aaPredicted RBP6.71□□□□□ -1.34
PSEN1-221ENST00000557293 PEA15Q15121 130 aa6.71□□□□□ -1.34
PSEN1-221ENST00000557293 KIAA1644Q3SXP7 199 aa6.7□□□□□ -1.34
PSEN1-221ENST00000557293 B5MCH6 92 aa6.69□□□□□ -1.34
PSEN1-221ENST00000557293 ETDCA0A1B0GVM5 59 aa6.68□□□□□ -1.34
PSEN1-221ENST00000557293 Q9BRP9 147 aa6.68□□□□□ -1.34
PSEN1-221ENST00000557293 FCGBPQ9Y6R7 5405 aaPredicted RBP6.67□□□□□ -1.34
PSEN1-221ENST00000557293 TRBV10-3A0A0K0K1G6 114 aa6.67□□□□□ -1.34
PSEN1-221ENST00000557293 A0A0U1RRA0 63 aa6.67□□□□□ -1.34
PSEN1-221ENST00000557293 LINC01549A6NIU2 74 aa6.67□□□□□ -1.34
PSEN1-221ENST00000557293 LINC00158P58513 81 aa6.67□□□□□ -1.34
PSEN1-221ENST00000557293 NCR3O14931 201 aa6.66□□□□□ -1.34
PSEN1-221ENST00000557293 COX6B2Q6YFQ2 88 aa6.65□□□□□ -1.34
PSEN1-221ENST00000557293 BOD1L2Q8IYS8 172 aa6.64□□□□□ -1.35
PSEN1-221ENST00000557293 ANAPC16Q96DE5 110 aa6.64□□□□□ -1.35
PSEN1-221ENST00000557293 KRTAP9-8Q9BYQ0 159 aa6.64□□□□□ -1.35
PSEN1-221ENST00000557293 A0A096LNJ9 63 aa6.63□□□□□ -1.35
PSEN1-221ENST00000557293 C11orf86A6NJI1 115 aa6.63□□□□□ -1.35
PSEN1-221ENST00000557293 TRAV9-1A0A075B6T8 112 aa6.62□□□□□ -1.35
PSEN1-221ENST00000557293 IGLV6-57P01721 117 aa6.62□□□□□ -1.35
PSEN1-221ENST00000557293 MT-ND4LP03901 98 aa6.62□□□□□ -1.35
PSEN1-221ENST00000557293 SMIM13P0DJ93 91 aa6.62□□□□□ -1.35
PSEN1-221ENST00000557293 SFTA2Q6UW10 78 aa6.62□□□□□ -1.35
PSEN1-221ENST00000557293 NDUFA6P56556 154 aa6.6□□□□□ -1.35
PSEN1-221ENST00000557293 C9orf153Q5TBE3 101 aa6.6□□□□□ -1.35
PSEN1-221ENST00000557293 Q6ZRX8 168 aa6.6□□□□□ -1.35
PSEN1-221ENST00000557293 RPL37P61927 97 aaKnown RBP6.59□□□□□ -1.35
PSEN1-221ENST00000557293 CLLU1Q5K131 121 aa6.59□□□□□ -1.35
PSEN1-221ENST00000557293 MIR7-3HGQ8N6C7 128 aa6.59□□□□□ -1.35
PSEN1-221ENST00000557293 ST20-AS1Q8NBB2 130 aa6.59□□□□□ -1.35
PSEN1-221ENST00000557293 TMEM170BQ5T4T1 132 aa6.58□□□□□ -1.36
PSEN1-221ENST00000557293 HRCT1Q6UXD1 115 aa6.58□□□□□ -1.36
PSEN1-221ENST00000557293 KRTAP19-1Q8IUB9 90 aa6.58□□□□□ -1.36
PSEN1-221ENST00000557293 URB1-AS1Q96HZ7 61 aa6.58□□□□□ -1.36
PSEN1-221ENST00000557293 FA2HQ7L5A8 372 aa6.57□□□□□ -1.36
PSEN1-221ENST00000557293 LOC107984156A0A0G2JMH3 177 aa6.56□□□□□ -1.36
PSEN1-221ENST00000557293 TMEM223A0PJW6 202 aa6.56□□□□□ -1.36
PSEN1-221ENST00000557293 BAGE3Q86Y29 109 aa6.56□□□□□ -1.36
PSEN1-221ENST00000557293 ARL17AQ8IVW1 177 aa6.56□□□□□ -1.36
PSEN1-221ENST00000557293 SLC7A5P1Q8MH63 180 aa6.56□□□□□ -1.36
PSEN1-221ENST00000557293 LIMD2Q9BT23 127 aa6.56□□□□□ -1.36
PSEN1-221ENST00000557293 CFC1P0CG37 223 aa6.55□□□□□ -1.36
PSEN1-221ENST00000557293 DDTP30046 118 aa6.55□□□□□ -1.36
PSEN1-221ENST00000557293 ATP6V1G1O75348 118 aa6.54□□□□□ -1.36
PSEN1-221ENST00000557293 SPRR1BP22528 89 aa6.54□□□□□ -1.36
PSEN1-221ENST00000557293 TRBV10-2A0A0K0K1G8 114 aa6.53□□□□□ -1.36
PSEN1-221ENST00000557293 LCE2BO14633 110 aa6.53□□□□□ -1.36
PSEN1-221ENST00000557293 NDUFA5Q16718 116 aa6.53□□□□□ -1.36
PSEN1-221ENST00000557293 MEIG1Q5JSS6 88 aa6.53□□□□□ -1.36
PSEN1-221ENST00000557293 SMCO4Q9NRQ5 59 aa6.53□□□□□ -1.36
PSEN1-221ENST00000557293 S100A12P80511 92 aa6.52□□□□□ -1.37
PSEN1-221ENST00000557293 C1orf195Q5TG92 126 aa6.52□□□□□ -1.37
PSEN1-221ENST00000557293 C5orf52A6NGY3 159 aa6.51□□□□□ -1.37
PSEN1-221ENST00000557293 PMCHL1Q16048 86 aa6.51□□□□□ -1.37
PSEN1-221ENST00000557293 CHTOPQ9Y3Y2 248 aaKnown RBP6.51□□□□□ -1.37
PSEN1-221ENST00000557293 HERV-K104P63124 156 aa6.5□□□□□ -1.37
PSEN1-221ENST00000557293 HBDP02042 147 aa6.49□□□□□ -1.37
PSEN1-221ENST00000557293 CD164Q04900 197 aa6.49□□□□□ -1.37
PSEN1-221ENST00000557293 JOSD1Q15040 202 aaPredicted RBP6.49□□□□□ -1.37
PSEN1-221ENST00000557293 Q5XG85 94 aa6.49□□□□□ -1.37
PSEN1-221ENST00000557293 LINC00614P0C842 121 aa6.48□□□□□ -1.37
PSEN1-221ENST00000557293 FABP9Q0Z7S8 132 aa6.48□□□□□ -1.37
PSEN1-221ENST00000557293 Q6Q795 121 aa6.48□□□□□ -1.37
PSEN1-221ENST00000557293 COMMD7Q86VX2 200 aa6.48□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms