RNA–Protein interactions for RNA: ENST00000557222.5

VRK1-206, Transcript of vaccinia related kinase 1, humanhuman

TSL 5

Gene VRK1, Length 1,029 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-206ENST00000557222 ANAPC11Q9NYG5 84 aa5□□□□□ -1.61
VRK1-206ENST00000557222 GAGE10A6NGK3 116 aa4.99□□□□□ -1.61
VRK1-206ENST00000557222 SPAG11AQ6PDA7 123 aa4.99□□□□□ -1.61
VRK1-206ENST00000557222 GNB1LQ9BYB4 327 aa4.99□□□□□ -1.61
VRK1-206ENST00000557222 LINC01546A6NGU7 62 aa4.98□□□□□ -1.61
VRK1-206ENST00000557222 ATP5LO75964 103 aa4.98□□□□□ -1.61
VRK1-206ENST00000557222 RPL24P83731 157 aaKnown RBP4.98□□□□□ -1.61
VRK1-206ENST00000557222 MPLKIPQ8TAP9 179 aa4.98□□□□□ -1.61
VRK1-206ENST00000557222 RETNLBQ9BQ08 111 aa4.98□□□□□ -1.61
VRK1-206ENST00000557222 CST9LQ9H4G1 147 aa4.98□□□□□ -1.61
VRK1-206ENST00000557222 IGKV2D-30A0A075B6S6 120 aa4.97□□□□□ -1.61
VRK1-206ENST00000557222 H3BRM9 83 aa4.97□□□□□ -1.61
VRK1-206ENST00000557222 RAB5BP61020 215 aa4.97□□□□□ -1.61
VRK1-206ENST00000557222 COX17Q14061 63 aa4.97□□□□□ -1.61
VRK1-206ENST00000557222 FP248Q71RG6 208 aaPredicted RBP4.97□□□□□ -1.61
VRK1-206ENST00000557222 PLEKHB2Q96CS7 222 aa4.97□□□□□ -1.61
VRK1-206ENST00000557222 IGKV2-28A0A075B6P5 120 aa4.96□□□□□ -1.62
VRK1-206ENST00000557222 TRAV9-1A0A075B6T8 112 aa4.96□□□□□ -1.62
VRK1-206ENST00000557222 IGLV5-39A0A0G2JS06 123 aa4.96□□□□□ -1.62
VRK1-206ENST00000557222 IGKV2D-28P01615 120 aa4.96□□□□□ -1.62
VRK1-206ENST00000557222 SPINK8P0C7L1 97 aa4.96□□□□□ -1.62
VRK1-206ENST00000557222 VPREB1P12018 145 aa4.96□□□□□ -1.62
VRK1-206ENST00000557222 PMVKQ15126 192 aa4.96□□□□□ -1.62
VRK1-206ENST00000557222 SFTA2Q6UW10 78 aa4.96□□□□□ -1.62
VRK1-206ENST00000557222 FAM19A1Q7Z5A9 133 aa4.96□□□□□ -1.62
VRK1-206ENST00000557222 TMEM126AQ9H061 195 aa4.96□□□□□ -1.62
VRK1-206ENST00000557222 PPDPFQ9H3Y8 114 aa4.96□□□□□ -1.62
VRK1-206ENST00000557222 ADCYAP1P18509 176 aa4.95□□□□□ -1.62
VRK1-206ENST00000557222 CBLN2Q8IUK8 224 aa4.95□□□□□ -1.62
VRK1-206ENST00000557222 M0R378 163 aa4.94□□□□□ -1.62
VRK1-206ENST00000557222 PRLHP81277 87 aa4.94□□□□□ -1.62
VRK1-206ENST00000557222 SND1-IT1Q9HBX3 110 aa4.94□□□□□ -1.62
VRK1-206ENST00000557222 TMEM238C9JI98 176 aa4.93□□□□□ -1.62
VRK1-206ENST00000557222 SCO1O75880 301 aa4.93□□□□□ -1.62
VRK1-206ENST00000557222 IGLC3P0DOY3 106 aa4.93□□□□□ -1.62
VRK1-206ENST00000557222 PFN2P35080 140 aa4.93□□□□□ -1.62
VRK1-206ENST00000557222 KIAA1644Q3SXP7 199 aa4.93□□□□□ -1.62
VRK1-206ENST00000557222 COX19Q49B96 90 aa4.93□□□□□ -1.62
VRK1-206ENST00000557222 KRTAP2-2Q9BYT5 123 aa4.93□□□□□ -1.62
VRK1-206ENST00000557222 ERG28Q9UKR5 140 aa4.93□□□□□ -1.62
VRK1-206ENST00000557222 ZNF706Q9Y5V0 76 aaPredicted RBP4.93□□□□□ -1.62
VRK1-206ENST00000557222 PRYO14603 147 aa4.92□□□□□ -1.62
VRK1-206ENST00000557222 ASB16-AS1Q495Z4 193 aa4.92□□□□□ -1.62
VRK1-206ENST00000557222 C3orf22Q8N5N4 141 aa4.92□□□□□ -1.62
VRK1-206ENST00000557222 LINC00337Q8N6G1 96 aa4.92□□□□□ -1.62
VRK1-206ENST00000557222 SPRR4Q96PI1 79 aa4.92□□□□□ -1.62
VRK1-206ENST00000557222 SPINK1P00995 79 aa4.91□□□□□ -1.62
VRK1-206ENST00000557222 RAB14P61106 215 aa4.91□□□□□ -1.62
VRK1-206ENST00000557222 FA2HQ7L5A8 372 aa4.91□□□□□ -1.62
VRK1-206ENST00000557222 A0A1B0GVG6 124 aa4.9□□□□□ -1.63
VRK1-206ENST00000557222 ZNF22P17026 224 aaPredicted RBP4.9□□□□□ -1.63
VRK1-206ENST00000557222 LINC01547P58512 204 aaPredicted RBP4.9□□□□□ -1.63
VRK1-206ENST00000557222 KRTAP13-3Q3SY46 172 aa4.9□□□□□ -1.63
VRK1-206ENST00000557222 HIGD2AQ9BW72 106 aa4.9□□□□□ -1.63
VRK1-206ENST00000557222 SMCO4Q9NRQ5 59 aa4.9□□□□□ -1.63
VRK1-206ENST00000557222 S100PP25815 95 aa4.89□□□□□ -1.63
VRK1-206ENST00000557222 SEC61BP60468 96 aaKnown RBP4.89□□□□□ -1.63
VRK1-206ENST00000557222 RPS29P62273 56 aaKnown RBP4.89□□□□□ -1.63
VRK1-206ENST00000557222 UQCC3Q6UW78 93 aa4.88□□□□□ -1.63
VRK1-206ENST00000557222 Q8NDZ9 215 aa4.88□□□□□ -1.63
VRK1-206ENST00000557222 ZNF625Q96I27 306 aaPredicted RBP4.88□□□□□ -1.63
VRK1-206ENST00000557222 SPRR1AP35321 89 aa4.87□□□□□ -1.63
VRK1-206ENST00000557222 NDUFA6P56556 154 aa4.87□□□□□ -1.63
VRK1-206ENST00000557222 LINC00158P58513 81 aa4.87□□□□□ -1.63
VRK1-206ENST00000557222 FABP9Q0Z7S8 132 aa4.87□□□□□ -1.63
VRK1-206ENST00000557222 LINC00483Q53H64 154 aa4.87□□□□□ -1.63
VRK1-206ENST00000557222 FAM19A2Q8N3H0 131 aa4.87□□□□□ -1.63
VRK1-206ENST00000557222 Q8NBF4 154 aa4.87□□□□□ -1.63
VRK1-206ENST00000557222 KCNQ1DNQ9H478 68 aa4.87□□□□□ -1.63
VRK1-206ENST00000557222 NDUFA12Q9UI09 145 aa4.87□□□□□ -1.63
VRK1-206ENST00000557222 A0A096LNJ9 63 aa4.86□□□□□ -1.63
VRK1-206ENST00000557222 TMEM218A2RU14 115 aa4.86□□□□□ -1.63
VRK1-206ENST00000557222 HBDP02042 147 aa4.86□□□□□ -1.63
VRK1-206ENST00000557222 LINC00614P0C842 121 aa4.86□□□□□ -1.63
VRK1-206ENST00000557222 CLLU1Q5K131 121 aa4.86□□□□□ -1.63
VRK1-206ENST00000557222 SSBP3-AS1Q7Z2R9 100 aa4.86□□□□□ -1.63
VRK1-206ENST00000557222 C11orf86A6NJI1 115 aa4.85□□□□□ -1.63
VRK1-206ENST00000557222 LINC00587B1AMM8 73 aa4.85□□□□□ -1.63
VRK1-206ENST00000557222 KRTAP4-16G5E9R7 235 aaPredicted RBP4.85□□□□□ -1.63
VRK1-206ENST00000557222 TMEM170BQ5T4T1 132 aa4.85□□□□□ -1.63
VRK1-206ENST00000557222 BAGE3Q86Y29 109 aa4.85□□□□□ -1.63
VRK1-206ENST00000557222 DAND5Q8N907 189 aa4.85□□□□□ -1.63
VRK1-206ENST00000557222 SMCR5Q8TEV8 140 aa4.85□□□□□ -1.63
VRK1-206ENST00000557222 SEC11CQ9BY50 192 aa4.85□□□□□ -1.63
VRK1-206ENST00000557222 ETDCA0A1B0GVM5 59 aa4.84□□□□□ -1.63
VRK1-206ENST00000557222 ATP6V1G1O75348 118 aa4.84□□□□□ -1.63
VRK1-206ENST00000557222 S100A12P80511 92 aa4.84□□□□□ -1.63
VRK1-206ENST00000557222 SLC25A20O43772 301 aa4.83□□□□□ -1.64
VRK1-206ENST00000557222 HERV-K104P63124 156 aa4.83□□□□□ -1.64
VRK1-206ENST00000557222 BOD1L2Q8IYS8 172 aa4.83□□□□□ -1.64
VRK1-206ENST00000557222 Q8N377 158 aa4.83□□□□□ -1.64
VRK1-206ENST00000557222 C18orf32Q8TCD1 76 aa4.83□□□□□ -1.64
VRK1-206ENST00000557222 URB1-AS1Q96HZ7 61 aa4.83□□□□□ -1.64
VRK1-206ENST00000557222 KRTAP4-1Q9BYQ7 146 aa4.83□□□□□ -1.64
VRK1-206ENST00000557222 FSIP2Q5CZC0 6907 aa4.83□□□□□ -1.64
VRK1-206ENST00000557222 TRAV12-1A0A0B4J245 112 aa4.82□□□□□ -1.64
VRK1-206ENST00000557222 TMEM223A0PJW6 202 aa4.82□□□□□ -1.64
VRK1-206ENST00000557222 CHTOPQ9Y3Y2 248 aaKnown RBP4.82□□□□□ -1.64
VRK1-206ENST00000557222 LOC107984156A0A0G2JMH3 177 aa4.81□□□□□ -1.64
VRK1-206ENST00000557222 SMIM13P0DJ93 91 aa4.81□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms