RNA–Protein interactions for RNA: ENST00000557076.5

SCFD1-223, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 743 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-223ENST00000557076 PFDN1O60925 122 aa2.49□□□□□ -2.01
SCFD1-223ENST00000557076 SNAPINO95295 136 aa2.49□□□□□ -2.01
SCFD1-223ENST00000557076 PPP1R17O96001 155 aa2.49□□□□□ -2.01
SCFD1-223ENST00000557076 SEC61GP60059 68 aa2.49□□□□□ -2.01
SCFD1-223ENST00000557076 CKS1BP61024 79 aa2.49□□□□□ -2.01
SCFD1-223ENST00000557076 C6orf226Q5I0X4 101 aa2.49□□□□□ -2.01
SCFD1-223ENST00000557076 RPL7L1Q6DKI1 246 aaKnown RBP2.49□□□□□ -2.01
SCFD1-223ENST00000557076 BATF3Q9NR55 127 aa2.49□□□□□ -2.01
SCFD1-223ENST00000557076 SSNA1O43805 119 aa2.48□□□□□ -2.01
SCFD1-223ENST00000557076 HBBP68871 147 aa2.48□□□□□ -2.01
SCFD1-223ENST00000557076 CCL20P78556 96 aa2.48□□□□□ -2.01
SCFD1-223ENST00000557076 PRLHP81277 87 aa2.48□□□□□ -2.01
SCFD1-223ENST00000557076 VAMP3Q15836 100 aa2.48□□□□□ -2.01
SCFD1-223ENST00000557076 CENPWQ5EE01 88 aa2.48□□□□□ -2.01
SCFD1-223ENST00000557076 SSBP3-AS1Q7Z2R9 100 aa2.48□□□□□ -2.01
SCFD1-223ENST00000557076 FAM19A1Q7Z5A9 133 aa2.48□□□□□ -2.01
SCFD1-223ENST00000557076 CBLN2Q8IUK8 224 aa2.48□□□□□ -2.01
SCFD1-223ENST00000557076 SFT2D1Q8WV19 159 aa2.48□□□□□ -2.01
SCFD1-223ENST00000557076 SPRR4Q96PI1 79 aa2.48□□□□□ -2.01
SCFD1-223ENST00000557076 SPANXA1Q9NS26 97 aa2.48□□□□□ -2.01
SCFD1-223ENST00000557076 F8VRH5 84 aa2.47□□□□□ -2.01
SCFD1-223ENST00000557076 TCAPO15273 167 aa2.47□□□□□ -2.01
SCFD1-223ENST00000557076 G0S2P27469 103 aa2.47□□□□□ -2.01
SCFD1-223ENST00000557076 GNG4P50150 75 aa2.47□□□□□ -2.01
SCFD1-223ENST00000557076 KRTAP20-1Q3LI63 56 aa2.47□□□□□ -2.01
SCFD1-223ENST00000557076 KRTAP19-6Q3LI70 58 aa2.47□□□□□ -2.01
SCFD1-223ENST00000557076 LINC01551Q86U37 167 aa2.47□□□□□ -2.01
SCFD1-223ENST00000557076 Q8IZM0 81 aa2.47□□□□□ -2.01
SCFD1-223ENST00000557076 KCNRGQ8N5I3 272 aa2.47□□□□□ -2.01
SCFD1-223ENST00000557076 TMEM126AQ9H061 195 aa2.47□□□□□ -2.01
SCFD1-223ENST00000557076 TMEM191AQ9H0A3 160 aa2.47□□□□□ -2.01
SCFD1-223ENST00000557076 IGKV2-28A0A075B6P5 120 aa2.46□□□□□ -2.02
SCFD1-223ENST00000557076 M0R378 163 aa2.46□□□□□ -2.02
SCFD1-223ENST00000557076 PPP1R2P9O14990 202 aa2.46□□□□□ -2.02
SCFD1-223ENST00000557076 IGKV2D-28P01615 120 aa2.46□□□□□ -2.02
SCFD1-223ENST00000557076 RPL39P62891 51 aaKnown RBP2.46□□□□□ -2.02
SCFD1-223ENST00000557076 FAM74A3Q4VXF1 159 aa2.46□□□□□ -2.02
SCFD1-223ENST00000557076 C5orf47Q569G3 176 aa2.46□□□□□ -2.02
SCFD1-223ENST00000557076 Q6ZN92 141 aa2.46□□□□□ -2.02
SCFD1-223ENST00000557076 NKAPP1Q8N9T2 125 aa2.46□□□□□ -2.02
SCFD1-223ENST00000557076 DHRS4-AS1Q9P1J3 65 aa2.46□□□□□ -2.02
SCFD1-223ENST00000557076 ZNF706Q9Y5V0 76 aaPredicted RBP2.46□□□□□ -2.02
SCFD1-223ENST00000557076 MUC12Q9UKN1 5478 aa2.46□□□□□ -2.02
SCFD1-223ENST00000557076 TRBV20OR9-2A0A075B6H5 130 aa2.45□□□□□ -2.02
SCFD1-223ENST00000557076 TRBV24-1A0A075B6N3 115 aa2.45□□□□□ -2.02
SCFD1-223ENST00000557076 A0A1B0GW15 77 aa2.45□□□□□ -2.02
SCFD1-223ENST00000557076 A8MWL6 223 aa2.45□□□□□ -2.02
SCFD1-223ENST00000557076 UMAD1C9J7I0 102 aa2.45□□□□□ -2.02
SCFD1-223ENST00000557076 TMEM238C9JI98 176 aa2.45□□□□□ -2.02
SCFD1-223ENST00000557076 TEX46H3BTG2 121 aa2.45□□□□□ -2.02
SCFD1-223ENST00000557076 Q5BKY6 102 aa2.45□□□□□ -2.02
SCFD1-223ENST00000557076 C20orf78Q9BR46 151 aa2.45□□□□□ -2.02
SCFD1-223ENST00000557076 HIGD2AQ9BW72 106 aa2.45□□□□□ -2.02
SCFD1-223ENST00000557076 NEBP20929 6669 aa2.45□□□□□ -2.02
SCFD1-223ENST00000557076 A0A1B0GUT8 65 aa2.44□□□□□ -2.02
SCFD1-223ENST00000557076 PDE6DO43924 150 aa2.44□□□□□ -2.02
SCFD1-223ENST00000557076 CXCL5P42830 114 aa2.44□□□□□ -2.02
SCFD1-223ENST00000557076 LINC00483Q53H64 154 aa2.44□□□□□ -2.02
SCFD1-223ENST00000557076 AMN1Q8IY45 258 aa2.44□□□□□ -2.02
SCFD1-223ENST00000557076 TOMM7Q9P0U1 55 aa2.44□□□□□ -2.02
SCFD1-223ENST00000557076 A0A1B0GV50 99 aa2.43□□□□□ -2.02
SCFD1-223ENST00000557076 LINC00862A6NCI5 91 aa2.43□□□□□ -2.02
SCFD1-223ENST00000557076 C9orf92A6NGG3 77 aa2.43□□□□□ -2.02
SCFD1-223ENST00000557076 SMKR1H3BMG3 65 aa2.43□□□□□ -2.02
SCFD1-223ENST00000557076 SCO1O75880 301 aa2.43□□□□□ -2.02
SCFD1-223ENST00000557076 MT2AP02795 61 aa2.43□□□□□ -2.02
SCFD1-223ENST00000557076 LINC00299Q6ZSB3 139 aa2.43□□□□□ -2.02
SCFD1-223ENST00000557076 FAM231DQ6ZW35 169 aa2.43□□□□□ -2.02
SCFD1-223ENST00000557076 FAM213BQ8TBF2 198 aa2.43□□□□□ -2.02
SCFD1-223ENST00000557076 BORCS7Q96B45 105 aa2.43□□□□□ -2.02
SCFD1-223ENST00000557076 MANBALQ9NQG1 85 aa2.43□□□□□ -2.02
SCFD1-223ENST00000557076 MED9Q9NWA0 146 aa2.43□□□□□ -2.02
SCFD1-223ENST00000557076 SMLR1H3BR10 107 aa2.42□□□□□ -2.02
SCFD1-223ENST00000557076 K7EN84 100 aa2.42□□□□□ -2.02
SCFD1-223ENST00000557076 IFI27P40305 119 aaPredicted RBP2.42□□□□□ -2.02
SCFD1-223ENST00000557076 Q6Q795 121 aa2.42□□□□□ -2.02
SCFD1-223ENST00000557076 TEX43Q6ZNM6 134 aa2.42□□□□□ -2.02
SCFD1-223ENST00000557076 FAM19A3Q7Z5A8 133 aa2.42□□□□□ -2.02
SCFD1-223ENST00000557076 TMEM141Q96I45 108 aa2.42□□□□□ -2.02
SCFD1-223ENST00000557076 EIF5A2Q9GZV4 153 aaKnown RBP2.42□□□□□ -2.02
SCFD1-223ENST00000557076 GNG13Q9P2W3 67 aa2.42□□□□□ -2.02
SCFD1-223ENST00000557076 KMT2DO14686 5537 aa2.41□□□□□ -2.02
SCFD1-223ENST00000557076 HIGD1CA8MV81 97 aa2.41□□□□□ -2.02
SCFD1-223ENST00000557076 IGLV6-57P01721 117 aa2.41□□□□□ -2.02
SCFD1-223ENST00000557076 MT1FP04733 61 aa2.41□□□□□ -2.02
SCFD1-223ENST00000557076 KRTAP10-10P60014 251 aa2.41□□□□□ -2.02
SCFD1-223ENST00000557076 RAB5BP61020 215 aa2.41□□□□□ -2.02
SCFD1-223ENST00000557076 RPL37P61927 97 aaKnown RBP2.41□□□□□ -2.02
SCFD1-223ENST00000557076 SEC11AP67812 179 aa2.41□□□□□ -2.02
SCFD1-223ENST00000557076 IFITM3Q01628 133 aa2.41□□□□□ -2.02
SCFD1-223ENST00000557076 MOBPQ13875 183 aa2.41□□□□□ -2.02
SCFD1-223ENST00000557076 FAM104BQ5XKR9 115 aa2.41□□□□□ -2.02
SCFD1-223ENST00000557076 C2orf66Q6UXQ4 117 aa2.41□□□□□ -2.02
SCFD1-223ENST00000557076 BOD1L2Q8IYS8 172 aa2.41□□□□□ -2.02
SCFD1-223ENST00000557076 SMCR5Q8TEV8 140 aa2.41□□□□□ -2.02
SCFD1-223ENST00000557076 AMELXQ99217 191 aa2.41□□□□□ -2.02
SCFD1-223ENST00000557076 C2orf88Q9BSF0 95 aa2.41□□□□□ -2.02
SCFD1-223ENST00000557076 CDKN2A-AS1Q9UH64 79 aa2.41□□□□□ -2.02
SCFD1-223ENST00000557076 FXYD6-FXYD2A0A087WZ82 144 aa2.4□□□□□ -2.03
SCFD1-223ENST00000557076 GIPP09681 153 aaPredicted RBP2.4□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 98.5 ms