RNA–Protein interactions for RNA: ENST00000557060.1

SYNE2-225, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 2

Gene SYNE2, Length 3,203 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-225ENST00000557060 TM2D3Q9BRN9 247 aa3.98□□□□□ -1.77
SYNE2-225ENST00000557060 LINC00588Q9Y4M8 146 aa3.98□□□□□ -1.77
SYNE2-225ENST00000557060 RPL18AQ02543 176 aaKnown RBP3.97□□□□□ -1.77
SYNE2-225ENST00000557060 S100A7L2Q5SY68 101 aa3.97□□□□□ -1.77
SYNE2-225ENST00000557060 CASC10Q5T4H9 136 aa3.97□□□□□ -1.77
SYNE2-225ENST00000557060 TRAV13-2A0A0B4J235 113 aa3.97□□□□□ -1.77
SYNE2-225ENST00000557060 TEN1Q86WV5 123 aa3.97□□□□□ -1.77
SYNE2-225ENST00000557060 A0A087WYN8 130 aa3.97□□□□□ -1.77
SYNE2-225ENST00000557060 J3QR89 54 aa3.97□□□□□ -1.77
SYNE2-225ENST00000557060 PCP4P48539 62 aa3.96□□□□□ -1.78
SYNE2-225ENST00000557060 Q6ZRU5 148 aa3.96□□□□□ -1.78
SYNE2-225ENST00000557060 C6orf48Q9UBA6 75 aa3.96□□□□□ -1.78
SYNE2-225ENST00000557060 CBY1Q9Y3M2 126 aa3.96□□□□□ -1.78
SYNE2-225ENST00000557060 LST1O00453 97 aa3.96□□□□□ -1.78
SYNE2-225ENST00000557060 DNAL4O96015 105 aa3.96□□□□□ -1.78
SYNE2-225ENST00000557060 UBE2DNLQ8IWF7 75 aa3.96□□□□□ -1.78
SYNE2-225ENST00000557060 TRBV10-2A0A0K0K1G8 114 aa3.95□□□□□ -1.78
SYNE2-225ENST00000557060 H3BNG1 76 aa3.95□□□□□ -1.78
SYNE2-225ENST00000557060 CXCL5P42830 114 aa3.95□□□□□ -1.78
SYNE2-225ENST00000557060 LINC01556Q5JQF7 62 aa3.95□□□□□ -1.78
SYNE2-225ENST00000557060 PPDPFLQ8WWR9 84 aa3.95□□□□□ -1.78
SYNE2-225ENST00000557060 KLK5Q9Y337 293 aaPredicted RBP3.95□□□□□ -1.78
SYNE2-225ENST00000557060 BAALC-AS2P0C853 105 aa3.94□□□□□ -1.78
SYNE2-225ENST00000557060 C6orf99Q4VX62 202 aa3.94□□□□□ -1.78
SYNE2-225ENST00000557060 C15orf56Q8N910 161 aa3.94□□□□□ -1.78
SYNE2-225ENST00000557060 IGLV2-33A0A075B6J2 118 aaPredicted RBP3.93□□□□□ -1.78
SYNE2-225ENST00000557060 DNHD1Q96M86 4753 aa3.93□□□□□ -1.78
SYNE2-225ENST00000557060 M0R2N4 97 aa3.93□□□□□ -1.78
SYNE2-225ENST00000557060 FBN3Q75N90 2809 aa3.93□□□□□ -1.78
SYNE2-225ENST00000557060 USP17L23D6RBM5 183 aa3.93□□□□□ -1.78
SYNE2-225ENST00000557060 PSCAO43653 123 aa3.93□□□□□ -1.78
SYNE2-225ENST00000557060 RPL28P46779 137 aaKnown RBP3.93□□□□□ -1.78
SYNE2-225ENST00000557060 C15orf53Q8NAA6 179 aa3.93□□□□□ -1.78
SYNE2-225ENST00000557060 HUWE1Q7Z6Z7 4374 aaKnown RBP3.92□□□□□ -1.78
SYNE2-225ENST00000557060 GAGE2BQ13066 116 aa3.92□□□□□ -1.78
SYNE2-225ENST00000557060 COX17Q14061 63 aa3.92□□□□□ -1.78
SYNE2-225ENST00000557060 TRBV10-3A0A0K0K1G6 114 aa3.92□□□□□ -1.78
SYNE2-225ENST00000557060 DNAH10OSP0CZ25 163 aa3.92□□□□□ -1.78
SYNE2-225ENST00000557060 SYCNQ0VAF6 134 aa3.92□□□□□ -1.78
SYNE2-225ENST00000557060 C9orf129Q5T035 196 aaKnown RBP3.92□□□□□ -1.78
SYNE2-225ENST00000557060 KRTAP26-1Q6PEX3 210 aa3.92□□□□□ -1.78
SYNE2-225ENST00000557060 Q6ZRP5 223 aa3.92□□□□□ -1.78
SYNE2-225ENST00000557060 KRTAP1-5Q9BYS1 174 aa3.92□□□□□ -1.78
SYNE2-225ENST00000557060 TMEM126AQ9H061 195 aa3.92□□□□□ -1.78
SYNE2-225ENST00000557060 SRRM2Q9UQ35 2752 aaKnown RBP3.91□□□□□ -1.78
SYNE2-225ENST00000557060 IGKV2-24A0A0C4DH68 120 aa3.91□□□□□ -1.78
SYNE2-225ENST00000557060 FAM168BA1KXE4 195 aa3.91□□□□□ -1.78
SYNE2-225ENST00000557060 RPL37AP8A6NKH3 93 aa3.91□□□□□ -1.78
SYNE2-225ENST00000557060 MT-ATP8P03928 68 aa3.91□□□□□ -1.78
SYNE2-225ENST00000557060 FUSP35637 526 aaKnown RBP eCLIP3.91□□□□□ -1.78
SYNE2-225ENST00000557060 LINC01561Q8N1V8 128 aa3.91□□□□□ -1.78
SYNE2-225ENST00000557060 SIGMAR1Q99720 223 aa3.91□□□□□ -1.78
SYNE2-225ENST00000557060 C14orf132Q9NPU4 83 aa3.91□□□□□ -1.78
SYNE2-225ENST00000557060 XGP55808 180 aa3.9□□□□□ -1.78
SYNE2-225ENST00000557060 H3BT86 120 aa3.9□□□□□ -1.79
SYNE2-225ENST00000557060 GAGE2AQ6NT46 116 aa3.9□□□□□ -1.79
SYNE2-225ENST00000557060 B9D2Q9BPU9 175 aa3.9□□□□□ -1.79
SYNE2-225ENST00000557060 NDUFC2-KCTD14E9PQ53 114 aa3.89□□□□□ -1.79
SYNE2-225ENST00000557060 TTC32Q5I0X7 151 aa3.89□□□□□ -1.79
SYNE2-225ENST00000557060 PRKDCP78527 4128 aaKnown RBP3.89□□□□□ -1.79
SYNE2-225ENST00000557060 DNAH3Q8TD57 4116 aa3.89□□□□□ -1.79
SYNE2-225ENST00000557060 FAM19A5Q7Z5A7 132 aaPredicted RBP3.89□□□□□ -1.79
SYNE2-225ENST00000557060 H0YGX0 51 aa3.89□□□□□ -1.79
SYNE2-225ENST00000557060 TRACP01848 142 aa3.89□□□□□ -1.79
SYNE2-225ENST00000557060 DNAH7Q8WXX0 4024 aa3.88□□□□□ -1.79
SYNE2-225ENST00000557060 TRAV23DV6A0A075B6W5 121 aa3.88□□□□□ -1.79
SYNE2-225ENST00000557060 SERTAD4-AS1Q5TG53 156 aa3.88□□□□□ -1.79
SYNE2-225ENST00000557060 NKAPP1Q8N9T2 125 aa3.88□□□□□ -1.79
SYNE2-225ENST00000557060 NDUFC2O95298 119 aa3.88□□□□□ -1.79
SYNE2-225ENST00000557060 Q6ZQY7 126 aa3.87□□□□□ -1.79
SYNE2-225ENST00000557060 Q8N814 137 aa3.87□□□□□ -1.79
SYNE2-225ENST00000557060 DEFB105AQ8NG35 78 aa3.87□□□□□ -1.79
SYNE2-225ENST00000557060 ORMDL1Q9P0S3 153 aa3.87□□□□□ -1.79
SYNE2-225ENST00000557060 GVQW2A0A096LPI5 108 aaPredicted RBP3.87□□□□□ -1.79
SYNE2-225ENST00000557060 ZNF73O43830 326 aaPredicted RBP3.87□□□□□ -1.79
SYNE2-225ENST00000557060 DPH3Q96FX2 82 aa3.87□□□□□ -1.79
SYNE2-225ENST00000557060 LAMTOR3Q9UHA4 124 aa3.87□□□□□ -1.79
SYNE2-225ENST00000557060 DNAH10Q8IVF4 4471 aa3.87□□□□□ -1.79
SYNE2-225ENST00000557060 VPREB1P12018 145 aa3.87□□□□□ -1.79
SYNE2-225ENST00000557060 DIRC1Q969H9 104 aa3.87□□□□□ -1.79
SYNE2-225ENST00000557060 C22orf24Q9Y442 160 aa3.87□□□□□ -1.79
SYNE2-225ENST00000557060 hADV29S1A0JD25 119 aa3.86□□□□□ -1.79
SYNE2-225ENST00000557060 APLNQ9ULZ1 77 aa3.86□□□□□ -1.79
SYNE2-225ENST00000557060 SNCGO76070 127 aa3.86□□□□□ -1.79
SYNE2-225ENST00000557060 CHTF8P0CG12 524 aa3.86□□□□□ -1.79
SYNE2-225ENST00000557060 RMI2Q96E14 147 aa3.86□□□□□ -1.79
SYNE2-225ENST00000557060 C2orf48Q96LS8 159 aa3.86□□□□□ -1.79
SYNE2-225ENST00000557060 IGLV6-57P01721 117 aa3.85□□□□□ -1.79
SYNE2-225ENST00000557060 LINC00575Q6W349 94 aa3.85□□□□□ -1.79
SYNE2-225ENST00000557060 C7orf33Q8WU49 177 aa3.85□□□□□ -1.79
SYNE2-225ENST00000557060 M0R378 163 aa3.84□□□□□ -1.79
SYNE2-225ENST00000557060 COX7BP24311 80 aa3.84□□□□□ -1.79
SYNE2-225ENST00000557060 DNAH9Q9NYC9 4486 aa3.84□□□□□ -1.79
SYNE2-225ENST00000557060 PPDPFQ9H3Y8 114 aa3.84□□□□□ -1.79
SYNE2-225ENST00000557060 UPK3BQ9BT76 320 aa3.83□□□□□ -1.8
SYNE2-225ENST00000557060 A0A096LNI7 61 aa3.83□□□□□ -1.8
SYNE2-225ENST00000557060 NUPR2A6NF83 97 aa3.83□□□□□ -1.8
SYNE2-225ENST00000557060 M0QXV9 152 aa3.83□□□□□ -1.8
SYNE2-225ENST00000557060 INAFM2P0DMQ5 153 aa3.83□□□□□ -1.8
SYNE2-225ENST00000557060 C3orf22Q8N5N4 141 aa3.83□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms