RNA–Protein interactions for RNA: ENST00000556548.5

SDR39U1-220, Transcript of short chain dehydrogenase/reductase family 39U member 1, humanhuman

TSL 2

Gene SDR39U1, Length 2,336 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDR39U1-220ENST00000556548 IGKV2D-28P01615 120 aa12.27□□□□□ -0.44
SDR39U1-220ENST00000556548 CXCL5P42830 114 aa12.27□□□□□ -0.44
SDR39U1-220ENST00000556548 C9orf153Q5TBE3 101 aa12.27□□□□□ -0.44
SDR39U1-220ENST00000556548 Q9HAA7 133 aa12.27□□□□□ -0.44
SDR39U1-220ENST00000556548 HIGD2BQ4VC39 106 aa12.27□□□□□ -0.45
SDR39U1-220ENST00000556548 IMUPQ9GZP8 106 aa12.27□□□□□ -0.45
SDR39U1-220ENST00000556548 C3orf22Q8N5N4 141 aa12.26□□□□□ -0.45
SDR39U1-220ENST00000556548 DNHD1Q96M86 4753 aa12.26□□□□□ -0.45
SDR39U1-220ENST00000556548 IGKV2D-24A0A075B6R9 120 aa12.26□□□□□ -0.45
SDR39U1-220ENST00000556548 KRTAP26-1Q6PEX3 210 aa12.26□□□□□ -0.45
SDR39U1-220ENST00000556548 LINC00337Q8N6G1 96 aa12.26□□□□□ -0.45
SDR39U1-220ENST00000556548 CLEC2BQ92478 149 aa12.26□□□□□ -0.45
SDR39U1-220ENST00000556548 J3KT08 172 aa12.25□□□□□ -0.45
SDR39U1-220ENST00000556548 LOC107984640A0A0U1RRK4 108 aa12.25□□□□□ -0.45
SDR39U1-220ENST00000556548 FAM236AA0A1B0GUQ0 79 aa12.25□□□□□ -0.45
SDR39U1-220ENST00000556548 FAM236BA0A1B0GV22 79 aa12.25□□□□□ -0.45
SDR39U1-220ENST00000556548 H3BT86 120 aa12.25□□□□□ -0.45
SDR39U1-220ENST00000556548 C1orf43Q9BWL3 253 aa12.24□□□□□ -0.45
SDR39U1-220ENST00000556548 A0A1B0GX51 115 aa12.23□□□□□ -0.45
SDR39U1-220ENST00000556548 UQCRQO14949 82 aa12.23□□□□□ -0.45
SDR39U1-220ENST00000556548 COX6CP09669 75 aa12.23□□□□□ -0.45
SDR39U1-220ENST00000556548 B9D2Q9BPU9 175 aa12.23□□□□□ -0.45
SDR39U1-220ENST00000556548 DNAH10OSP0CZ25 163 aa12.23□□□□□ -0.45
SDR39U1-220ENST00000556548 PRR3P79522 188 aaKnown RBP12.22□□□□□ -0.45
SDR39U1-220ENST00000556548 FAM19A5Q7Z5A7 132 aaPredicted RBP12.22□□□□□ -0.45
SDR39U1-220ENST00000556548 TRAV13-2A0A0B4J235 113 aa12.21□□□□□ -0.45
SDR39U1-220ENST00000556548 COX17Q14061 63 aa12.21□□□□□ -0.46
SDR39U1-220ENST00000556548 ZNF561-AS1K7EIQ3 104 aa12.2□□□□□ -0.46
SDR39U1-220ENST00000556548 OR13C6PQ8NH95 151 aa12.2□□□□□ -0.46
SDR39U1-220ENST00000556548 C15orf56Q8N910 161 aa12.19□□□□□ -0.46
SDR39U1-220ENST00000556548 ACYP1P07311 99 aa12.19□□□□□ -0.46
SDR39U1-220ENST00000556548 RPS28P62857 69 aaKnown RBP12.19□□□□□ -0.46
SDR39U1-220ENST00000556548 C6orf48Q9UBA6 75 aa12.19□□□□□ -0.46
SDR39U1-220ENST00000556548 CSMD3Q7Z407 3707 aa12.17□□□□□ -0.46
SDR39U1-220ENST00000556548 CAMK2N2Q96S95 79 aa12.17□□□□□ -0.46
SDR39U1-220ENST00000556548 Q8NDZ9 215 aa12.16□□□□□ -0.46
SDR39U1-220ENST00000556548 SMIM11BQ8TCY0 68 aa12.16□□□□□ -0.46
SDR39U1-220ENST00000556548 MEGF8Q7Z7M0 2845 aa12.15□□□□□ -0.46
SDR39U1-220ENST00000556548 LST1O00453 97 aa12.15□□□□□ -0.46
SDR39U1-220ENST00000556548 PRKDCP78527 4128 aaKnown RBP12.14□□□□□ -0.47
SDR39U1-220ENST00000556548 TENM2Q9NT68 2774 aa12.14□□□□□ -0.47
SDR39U1-220ENST00000556548 NCR3O14931 201 aa12.14□□□□□ -0.47
SDR39U1-220ENST00000556548 Q6ZRU5 148 aa12.14□□□□□ -0.47
SDR39U1-220ENST00000556548 CASC10Q5T4H9 136 aa12.13□□□□□ -0.47
SDR39U1-220ENST00000556548 XAGE1AQ9HD64 81 aa12.13□□□□□ -0.47
SDR39U1-220ENST00000556548 RPL28P46779 137 aaKnown RBP12.12□□□□□ -0.47
SDR39U1-220ENST00000556548 LINC00643Q86TS7 51 aa12.12□□□□□ -0.47
SDR39U1-220ENST00000556548 DNAH1Q9P2D7 4330 aa12.12□□□□□ -0.47
SDR39U1-220ENST00000556548 COX7CP15954 63 aa12.12□□□□□ -0.47
SDR39U1-220ENST00000556548 GAGE2AQ6NT46 116 aa12.11□□□□□ -0.47
SDR39U1-220ENST00000556548 FAM218AQ96MZ4 157 aa12.11□□□□□ -0.47
SDR39U1-220ENST00000556548 GVQW2A0A096LPI5 108 aaPredicted RBP12.11□□□□□ -0.47
SDR39U1-220ENST00000556548 DNAH7Q8WXX0 4024 aa12.11□□□□□ -0.47
SDR39U1-220ENST00000556548 CRYGAP11844 174 aa12.1□□□□□ -0.47
SDR39U1-220ENST00000556548 UPK3BQ9BT76 320 aa12.1□□□□□ -0.47
SDR39U1-220ENST00000556548 LECT2O14960 151 aa12.09□□□□□ -0.47
SDR39U1-220ENST00000556548 APLNQ9ULZ1 77 aa12.09□□□□□ -0.47
SDR39U1-220ENST00000556548 NDUFC2O95298 119 aa12.08□□□□□ -0.48
SDR39U1-220ENST00000556548 UBE2DNLQ8IWF7 75 aa12.08□□□□□ -0.48
SDR39U1-220ENST00000556548 SMCR5Q8TEV8 140 aa12.07□□□□□ -0.48
SDR39U1-220ENST00000556548 PLECQ15149 4684 aaKnown RBP12.07□□□□□ -0.48
SDR39U1-220ENST00000556548 C2orf48Q96LS8 159 aa12.06□□□□□ -0.48
SDR39U1-220ENST00000556548 DYNC2H1Q8NCM8 4307 aaKnown RBP12.05□□□□□ -0.48
SDR39U1-220ENST00000556548 KRTAP1-5Q9BYS1 174 aa12.05□□□□□ -0.48
SDR39U1-220ENST00000556548 USP17L23D6RBM5 183 aa12.05□□□□□ -0.48
SDR39U1-220ENST00000556548 RPL18AQ02543 176 aaKnown RBP12.05□□□□□ -0.48
SDR39U1-220ENST00000556548 DNAH10Q8IVF4 4471 aa12.05□□□□□ -0.48
SDR39U1-220ENST00000556548 A0A087WYN8 130 aa12.04□□□□□ -0.48
SDR39U1-220ENST00000556548 SYCNQ0VAF6 134 aa12.04□□□□□ -0.48
SDR39U1-220ENST00000556548 S100A7L2Q5SY68 101 aa12.04□□□□□ -0.48
SDR39U1-220ENST00000556548 SDIM1Q6ZPB5 146 aa12.04□□□□□ -0.48
SDR39U1-220ENST00000556548 MUC7Q8TAX7 377 aa12.03□□□□□ -0.48
SDR39U1-220ENST00000556548 TRACP01848 142 aa12.03□□□□□ -0.48
SDR39U1-220ENST00000556548 ATOX1O00244 68 aa12.02□□□□□ -0.49
SDR39U1-220ENST00000556548 SLPIP03973 132 aa12.02□□□□□ -0.49
SDR39U1-220ENST00000556548 Q6ZRP5 223 aa12.02□□□□□ -0.49
SDR39U1-220ENST00000556548 RMI2Q96E14 147 aa12.02□□□□□ -0.49
SDR39U1-220ENST00000556548 NDUFC2-KCTD14E9PQ53 114 aa12.01□□□□□ -0.49
SDR39U1-220ENST00000556548 STARD9Q9P2P6 4700 aa12□□□□□ -0.49
SDR39U1-220ENST00000556548 hADV29S1A0JD25 119 aa12□□□□□ -0.49
SDR39U1-220ENST00000556548 TMEM258P61165 79 aa12□□□□□ -0.49
SDR39U1-220ENST00000556548 HIST1H4AP62805 103 aaKnown RBP12□□□□□ -0.49
SDR39U1-220ENST00000556548 DPH3Q96FX2 82 aa12□□□□□ -0.49
SDR39U1-220ENST00000556548 H0YGX0 51 aa11.99□□□□□ -0.49
SDR39U1-220ENST00000556548 C6orf99Q4VX62 202 aa11.98□□□□□ -0.49
SDR39U1-220ENST00000556548 BAALC-AS2P0C853 105 aa11.97□□□□□ -0.49
SDR39U1-220ENST00000556548 NUPR2A6NF83 97 aa11.97□□□□□ -0.49
SDR39U1-220ENST00000556548 DNAL4O96015 105 aa11.96□□□□□ -0.49
SDR39U1-220ENST00000556548 TRBV10-3A0A0K0K1G6 114 aa11.95□□□□□ -0.5
SDR39U1-220ENST00000556548 F8WDY8 70 aa11.94□□□□□ -0.5
SDR39U1-220ENST00000556548 IGLV6-57P01721 117 aa11.94□□□□□ -0.5
SDR39U1-220ENST00000556548 VPREB1P12018 145 aa11.94□□□□□ -0.5
SDR39U1-220ENST00000556548 C9orf129Q5T035 196 aaKnown RBP11.94□□□□□ -0.5
SDR39U1-220ENST00000556548 PSCAO43653 123 aa11.93□□□□□ -0.5
SDR39U1-220ENST00000556548 CYSTM1Q9H1C7 97 aa11.93□□□□□ -0.5
SDR39U1-220ENST00000556548 C4orf26Q17RF5 130 aa11.92□□□□□ -0.5
SDR39U1-220ENST00000556548 C22orf24Q9Y442 160 aa11.91□□□□□ -0.5
SDR39U1-220ENST00000556548 INAFM2P0DMQ5 153 aa11.91□□□□□ -0.5
SDR39U1-220ENST00000556548 SERP2Q8N6R1 65 aa11.9□□□□□ -0.5
SDR39U1-220ENST00000556548 OXTP01178 125 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 69 ms