RNA–Protein interactions for RNA: ENST00000556548.5

SDR39U1-220, Transcript of short chain dehydrogenase/reductase family 39U member 1, humanhuman

TSL 2

Gene SDR39U1, Length 2,336 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDR39U1-220ENST00000556548 IGKV2D-28P01615 120 aa12.27□□□□□ -0.44
SDR39U1-220ENST00000556548 CXCL5P42830 114 aa12.27□□□□□ -0.44
SDR39U1-220ENST00000556548 C9orf153Q5TBE3 101 aa12.27□□□□□ -0.44
SDR39U1-220ENST00000556548 Q9HAA7 133 aa12.27□□□□□ -0.44
SDR39U1-220ENST00000556548 HIGD2BQ4VC39 106 aa12.27□□□□□ -0.45
SDR39U1-220ENST00000556548 IMUPQ9GZP8 106 aa12.27□□□□□ -0.45
SDR39U1-220ENST00000556548 C3orf22Q8N5N4 141 aa12.26□□□□□ -0.45
SDR39U1-220ENST00000556548 DNHD1Q96M86 4753 aa12.26□□□□□ -0.45
SDR39U1-220ENST00000556548 IGKV2D-24A0A075B6R9 120 aa12.26□□□□□ -0.45
SDR39U1-220ENST00000556548 KRTAP26-1Q6PEX3 210 aa12.26□□□□□ -0.45
SDR39U1-220ENST00000556548 LINC00337Q8N6G1 96 aa12.26□□□□□ -0.45
SDR39U1-220ENST00000556548 CLEC2BQ92478 149 aa12.26□□□□□ -0.45
SDR39U1-220ENST00000556548 J3KT08 172 aa12.25□□□□□ -0.45
SDR39U1-220ENST00000556548 LOC107984640A0A0U1RRK4 108 aa12.25□□□□□ -0.45
SDR39U1-220ENST00000556548 FAM236AA0A1B0GUQ0 79 aa12.25□□□□□ -0.45
SDR39U1-220ENST00000556548 FAM236BA0A1B0GV22 79 aa12.25□□□□□ -0.45
SDR39U1-220ENST00000556548 H3BT86 120 aa12.25□□□□□ -0.45
SDR39U1-220ENST00000556548 C1orf43Q9BWL3 253 aa12.24□□□□□ -0.45
SDR39U1-220ENST00000556548 A0A1B0GX51 115 aa12.23□□□□□ -0.45
SDR39U1-220ENST00000556548 UQCRQO14949 82 aa12.23□□□□□ -0.45
SDR39U1-220ENST00000556548 COX6CP09669 75 aa12.23□□□□□ -0.45
SDR39U1-220ENST00000556548 B9D2Q9BPU9 175 aa12.23□□□□□ -0.45
SDR39U1-220ENST00000556548 DNAH10OSP0CZ25 163 aa12.23□□□□□ -0.45
SDR39U1-220ENST00000556548 PRR3P79522 188 aaKnown RBP12.22□□□□□ -0.45
SDR39U1-220ENST00000556548 FAM19A5Q7Z5A7 132 aaPredicted RBP12.22□□□□□ -0.45
SDR39U1-220ENST00000556548 TRAV13-2A0A0B4J235 113 aa12.21□□□□□ -0.45
SDR39U1-220ENST00000556548 COX17Q14061 63 aa12.21□□□□□ -0.46
SDR39U1-220ENST00000556548 ZNF561-AS1K7EIQ3 104 aa12.2□□□□□ -0.46
SDR39U1-220ENST00000556548 OR13C6PQ8NH95 151 aa12.2□□□□□ -0.46
SDR39U1-220ENST00000556548 C15orf56Q8N910 161 aa12.19□□□□□ -0.46
SDR39U1-220ENST00000556548 ACYP1P07311 99 aa12.19□□□□□ -0.46
SDR39U1-220ENST00000556548 RPS28P62857 69 aaKnown RBP12.19□□□□□ -0.46
SDR39U1-220ENST00000556548 C6orf48Q9UBA6 75 aa12.19□□□□□ -0.46
SDR39U1-220ENST00000556548 CSMD3Q7Z407 3707 aa12.17□□□□□ -0.46
SDR39U1-220ENST00000556548 CAMK2N2Q96S95 79 aa12.17□□□□□ -0.46
SDR39U1-220ENST00000556548 Q8NDZ9 215 aa12.16□□□□□ -0.46
SDR39U1-220ENST00000556548 SMIM11BQ8TCY0 68 aa12.16□□□□□ -0.46
SDR39U1-220ENST00000556548 MEGF8Q7Z7M0 2845 aa12.15□□□□□ -0.46
SDR39U1-220ENST00000556548 LST1O00453 97 aa12.15□□□□□ -0.46
SDR39U1-220ENST00000556548 PRKDCP78527 4128 aaKnown RBP12.14□□□□□ -0.47
SDR39U1-220ENST00000556548 TENM2Q9NT68 2774 aa12.14□□□□□ -0.47
SDR39U1-220ENST00000556548 NCR3O14931 201 aa12.14□□□□□ -0.47
SDR39U1-220ENST00000556548 Q6ZRU5 148 aa12.14□□□□□ -0.47
SDR39U1-220ENST00000556548 CASC10Q5T4H9 136 aa12.13□□□□□ -0.47
SDR39U1-220ENST00000556548 XAGE1AQ9HD64 81 aa12.13□□□□□ -0.47
SDR39U1-220ENST00000556548 RPL28P46779 137 aaKnown RBP12.12□□□□□ -0.47
SDR39U1-220ENST00000556548 LINC00643Q86TS7 51 aa12.12□□□□□ -0.47
SDR39U1-220ENST00000556548 DNAH1Q9P2D7 4330 aa12.12□□□□□ -0.47
SDR39U1-220ENST00000556548 COX7CP15954 63 aa12.12□□□□□ -0.47
SDR39U1-220ENST00000556548 GAGE2AQ6NT46 116 aa12.11□□□□□ -0.47
SDR39U1-220ENST00000556548 FAM218AQ96MZ4 157 aa12.11□□□□□ -0.47
SDR39U1-220ENST00000556548 GVQW2A0A096LPI5 108 aaPredicted RBP12.11□□□□□ -0.47
SDR39U1-220ENST00000556548 DNAH7Q8WXX0 4024 aa12.11□□□□□ -0.47
SDR39U1-220ENST00000556548 CRYGAP11844 174 aa12.1□□□□□ -0.47
SDR39U1-220ENST00000556548 UPK3BQ9BT76 320 aa12.1□□□□□ -0.47
SDR39U1-220ENST00000556548 LECT2O14960 151 aa12.09□□□□□ -0.47
SDR39U1-220ENST00000556548 APLNQ9ULZ1 77 aa12.09□□□□□ -0.47
SDR39U1-220ENST00000556548 NDUFC2O95298 119 aa12.08□□□□□ -0.48
SDR39U1-220ENST00000556548 UBE2DNLQ8IWF7 75 aa12.08□□□□□ -0.48
SDR39U1-220ENST00000556548 SMCR5Q8TEV8 140 aa12.07□□□□□ -0.48
SDR39U1-220ENST00000556548 PLECQ15149 4684 aaKnown RBP12.07□□□□□ -0.48
SDR39U1-220ENST00000556548 C2orf48Q96LS8 159 aa12.06□□□□□ -0.48
SDR39U1-220ENST00000556548 DYNC2H1Q8NCM8 4307 aaKnown RBP12.05□□□□□ -0.48
SDR39U1-220ENST00000556548 KRTAP1-5Q9BYS1 174 aa12.05□□□□□ -0.48
SDR39U1-220ENST00000556548 USP17L23D6RBM5 183 aa12.05□□□□□ -0.48
SDR39U1-220ENST00000556548 RPL18AQ02543 176 aaKnown RBP12.05□□□□□ -0.48
SDR39U1-220ENST00000556548 DNAH10Q8IVF4 4471 aa12.05□□□□□ -0.48
SDR39U1-220ENST00000556548 A0A087WYN8 130 aa12.04□□□□□ -0.48
SDR39U1-220ENST00000556548 SYCNQ0VAF6 134 aa12.04□□□□□ -0.48
SDR39U1-220ENST00000556548 S100A7L2Q5SY68 101 aa12.04□□□□□ -0.48
SDR39U1-220ENST00000556548 SDIM1Q6ZPB5 146 aa12.04□□□□□ -0.48
SDR39U1-220ENST00000556548 MUC7Q8TAX7 377 aa12.03□□□□□ -0.48
SDR39U1-220ENST00000556548 TRACP01848 142 aa12.03□□□□□ -0.48
SDR39U1-220ENST00000556548 ATOX1O00244 68 aa12.02□□□□□ -0.49
SDR39U1-220ENST00000556548 SLPIP03973 132 aa12.02□□□□□ -0.49
SDR39U1-220ENST00000556548 Q6ZRP5 223 aa12.02□□□□□ -0.49
SDR39U1-220ENST00000556548 RMI2Q96E14 147 aa12.02□□□□□ -0.49
SDR39U1-220ENST00000556548 NDUFC2-KCTD14E9PQ53 114 aa12.01□□□□□ -0.49
SDR39U1-220ENST00000556548 STARD9Q9P2P6 4700 aa12□□□□□ -0.49
SDR39U1-220ENST00000556548 hADV29S1A0JD25 119 aa12□□□□□ -0.49
SDR39U1-220ENST00000556548 TMEM258P61165 79 aa12□□□□□ -0.49
SDR39U1-220ENST00000556548 HIST1H4AP62805 103 aaKnown RBP12□□□□□ -0.49
SDR39U1-220ENST00000556548 DPH3Q96FX2 82 aa12□□□□□ -0.49
SDR39U1-220ENST00000556548 H0YGX0 51 aa11.99□□□□□ -0.49
SDR39U1-220ENST00000556548 C6orf99Q4VX62 202 aa11.98□□□□□ -0.49
SDR39U1-220ENST00000556548 BAALC-AS2P0C853 105 aa11.97□□□□□ -0.49
SDR39U1-220ENST00000556548 NUPR2A6NF83 97 aa11.97□□□□□ -0.49
SDR39U1-220ENST00000556548 DNAL4O96015 105 aa11.96□□□□□ -0.49
SDR39U1-220ENST00000556548 TRBV10-3A0A0K0K1G6 114 aa11.95□□□□□ -0.5
SDR39U1-220ENST00000556548 F8WDY8 70 aa11.94□□□□□ -0.5
SDR39U1-220ENST00000556548 IGLV6-57P01721 117 aa11.94□□□□□ -0.5
SDR39U1-220ENST00000556548 VPREB1P12018 145 aa11.94□□□□□ -0.5
SDR39U1-220ENST00000556548 C9orf129Q5T035 196 aaKnown RBP11.94□□□□□ -0.5
SDR39U1-220ENST00000556548 PSCAO43653 123 aa11.93□□□□□ -0.5
SDR39U1-220ENST00000556548 CYSTM1Q9H1C7 97 aa11.93□□□□□ -0.5
SDR39U1-220ENST00000556548 C4orf26Q17RF5 130 aa11.92□□□□□ -0.5
SDR39U1-220ENST00000556548 C22orf24Q9Y442 160 aa11.91□□□□□ -0.5
SDR39U1-220ENST00000556548 INAFM2P0DMQ5 153 aa11.91□□□□□ -0.5
SDR39U1-220ENST00000556548 SERP2Q8N6R1 65 aa11.9□□□□□ -0.5
SDR39U1-220ENST00000556548 OXTP01178 125 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 83.7 ms