RNA–Protein interactions for RNA: ENST00000556445.1

SRP54-211, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 530 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-211ENST00000556445 TAX1BP3O14907 124 aa3.41□□□□□ -1.86
SRP54-211ENST00000556445 CIRBPQ14011 172 aaKnown RBP3.41□□□□□ -1.86
SRP54-211ENST00000556445 SFTA2Q6UW10 78 aa3.41□□□□□ -1.86
SRP54-211ENST00000556445 NTM-AS1Q6ZSK4 140 aa3.41□□□□□ -1.86
SRP54-211ENST00000556445 GTF2H5Q6ZYL4 71 aa3.41□□□□□ -1.86
SRP54-211ENST00000556445 Q8NAQ8 132 aa3.41□□□□□ -1.86
SRP54-211ENST00000556445 TM2D3Q9BRN9 247 aa3.41□□□□□ -1.86
SRP54-211ENST00000556445 C8orf17Q9NRJ1 99 aa3.41□□□□□ -1.86
SRP54-211ENST00000556445 CDC42SE2Q9NRR3 84 aa3.41□□□□□ -1.86
SRP54-211ENST00000556445 CELSR1Q9NYQ6 3014 aa3.41□□□□□ -1.86
SRP54-211ENST00000556445 HIVEP1P15822 2718 aa3.4□□□□□ -1.86
SRP54-211ENST00000556445 A0A0J9YY99 117 aa3.4□□□□□ -1.87
SRP54-211ENST00000556445 H3BNG1 76 aa3.4□□□□□ -1.87
SRP54-211ENST00000556445 TIMM17BO60830 172 aa3.4□□□□□ -1.87
SRP54-211ENST00000556445 IGHV3-30-3P0DP02 117 aa3.4□□□□□ -1.87
SRP54-211ENST00000556445 IFITM1P13164 125 aa3.4□□□□□ -1.87
SRP54-211ENST00000556445 DSCR10P59022 87 aa3.4□□□□□ -1.87
SRP54-211ENST00000556445 LYRM7Q5U5X0 104 aa3.4□□□□□ -1.87
SRP54-211ENST00000556445 TTTY13Q9BZ97 58 aa3.4□□□□□ -1.87
SRP54-211ENST00000556445 IMUPQ9GZP8 106 aa3.4□□□□□ -1.87
SRP54-211ENST00000556445 NDUFA12Q9UI09 145 aa3.4□□□□□ -1.87
SRP54-211ENST00000556445 ICOSQ9Y6W8 199 aa3.4□□□□□ -1.87
SRP54-211ENST00000556445 TRAV16A0A0A6YYK6 109 aaPredicted RBP3.39□□□□□ -1.87
SRP54-211ENST00000556445 TRAV13-1A0A0B4J241 112 aa3.39□□□□□ -1.87
SRP54-211ENST00000556445 INAFM2P0DMQ5 153 aa3.39□□□□□ -1.87
SRP54-211ENST00000556445 FABP2P12104 132 aa3.39□□□□□ -1.87
SRP54-211ENST00000556445 FXYD2P54710 66 aa3.39□□□□□ -1.87
SRP54-211ENST00000556445 SS18Q15532 418 aa3.39□□□□□ -1.87
SRP54-211ENST00000556445 RNASE13Q5GAN3 156 aaKnown RBP3.39□□□□□ -1.87
SRP54-211ENST00000556445 KRTAP5-1Q6L8H4 278 aa3.39□□□□□ -1.87
SRP54-211ENST00000556445 NHP2Q9NX24 153 aaKnown RBP3.39□□□□□ -1.87
SRP54-211ENST00000556445 JMJD1CQ15652 2540 aa3.38□□□□□ -1.87
SRP54-211ENST00000556445 TMEM262E9PQX1 116 aa3.38□□□□□ -1.87
SRP54-211ENST00000556445 H3BUT2 72 aa3.38□□□□□ -1.87
SRP54-211ENST00000556445 NDUFA1O15239 70 aa3.38□□□□□ -1.87
SRP54-211ENST00000556445 SPINK8P0C7L1 97 aa3.38□□□□□ -1.87
SRP54-211ENST00000556445 LELP1Q5T871 98 aa3.38□□□□□ -1.87
SRP54-211ENST00000556445 Q5XG85 94 aa3.38□□□□□ -1.87
SRP54-211ENST00000556445 KTN1-AS1Q86SY8 53 aa3.38□□□□□ -1.87
SRP54-211ENST00000556445 SPANXDQ9BXN6 97 aa3.38□□□□□ -1.87
SRP54-211ENST00000556445 CDKN2A-AS1Q9UH64 79 aa3.38□□□□□ -1.87
SRP54-211ENST00000556445 CSMD1Q96PZ7 3565 aa3.37□□□□□ -1.87
SRP54-211ENST00000556445 TEP1Q99973 2627 aaKnown RBP3.37□□□□□ -1.87
SRP54-211ENST00000556445 IGHV3-64A0A075B6Q5 118 aa3.37□□□□□ -1.87
SRP54-211ENST00000556445 A0A1B0GVX0 72 aa3.37□□□□□ -1.87
SRP54-211ENST00000556445 A0A1W2PPM0 123 aa3.37□□□□□ -1.87
SRP54-211ENST00000556445 IGLL5B9A064 214 aa3.37□□□□□ -1.87
SRP54-211ENST00000556445 IGHV3-30P01768 117 aa3.37□□□□□ -1.87
SRP54-211ENST00000556445 IGHV3-30-5P0DP03 117 aa3.37□□□□□ -1.87
SRP54-211ENST00000556445 UBE2AP49459 152 aa3.37□□□□□ -1.87
SRP54-211ENST00000556445 TSPEAR-AS2P59090 65 aa3.37□□□□□ -1.87
SRP54-211ENST00000556445 Q1RN00 199 aa3.37□□□□□ -1.87
SRP54-211ENST00000556445 OCIAD2Q56VL3 154 aa3.37□□□□□ -1.87
SRP54-211ENST00000556445 PRR15Q8IV56 129 aa3.37□□□□□ -1.87
SRP54-211ENST00000556445 RAB37Q96AX2 223 aa3.37□□□□□ -1.87
SRP54-211ENST00000556445 B9D2Q9BPU9 175 aa3.37□□□□□ -1.87
SRP54-211ENST00000556445 CELA1Q9UNI1 258 aa3.37□□□□□ -1.87
SRP54-211ENST00000556445 CSMD2Q7Z408 3487 aa3.37□□□□□ -1.87
SRP54-211ENST00000556445 NF1P21359 2839 aa3.37□□□□□ -1.87
SRP54-211ENST00000556445 OTOGQ6ZRI0 2925 aa3.37□□□□□ -1.87
SRP54-211ENST00000556445 VPS13CQ709C8 3753 aa3.36□□□□□ -1.87
SRP54-211ENST00000556445 IGLV4-60A0A075B6I1 120 aa3.36□□□□□ -1.87
SRP54-211ENST00000556445 A0A0B4J2C4 111 aa3.36□□□□□ -1.87
SRP54-211ENST00000556445 LINC00959A0A1B0GUT2 108 aa3.36□□□□□ -1.87
SRP54-211ENST00000556445 K7EP34 96 aa3.36□□□□□ -1.87
SRP54-211ENST00000556445 BPY2O14599 106 aa3.36□□□□□ -1.87
SRP54-211ENST00000556445 DEFB4AO15263 64 aa3.36□□□□□ -1.87
SRP54-211ENST00000556445 HTN3P15516 51 aa3.36□□□□□ -1.87
SRP54-211ENST00000556445 COX6A2Q02221 97 aa3.36□□□□□ -1.87
SRP54-211ENST00000556445 MIAQ16674 131 aa3.36□□□□□ -1.87
SRP54-211ENST00000556445 SCXQ7RTU7 201 aa3.36□□□□□ -1.87
SRP54-211ENST00000556445 C10orf126Q8N4M7 172 aa3.36□□□□□ -1.87
SRP54-211ENST00000556445 C15orf56Q8N910 161 aa3.36□□□□□ -1.87
SRP54-211ENST00000556445 COX7B2Q8TF08 81 aa3.36□□□□□ -1.87
SRP54-211ENST00000556445 PRO1854Q9UHT4 67 aa3.36□□□□□ -1.87
SRP54-211ENST00000556445 SPCS1Q9Y6A9 102 aa3.36□□□□□ -1.87
SRP54-211ENST00000556445 ATRQ13535 2644 aa3.36□□□□□ -1.87
SRP54-211ENST00000556445 FLNBO75369 2602 aaKnown RBP3.35□□□□□ -1.87
SRP54-211ENST00000556445 TRBV20-1A0A075B6N2 111 aa3.35□□□□□ -1.87
SRP54-211ENST00000556445 A0A096LPF7 62 aa3.35□□□□□ -1.87
SRP54-211ENST00000556445 ZNF73O43830 326 aaPredicted RBP3.35□□□□□ -1.87
SRP54-211ENST00000556445 ANGP03950 147 aaKnown RBP3.35□□□□□ -1.87
SRP54-211ENST00000556445 LUZP6Q538Z0 58 aa3.35□□□□□ -1.87
SRP54-211ENST00000556445 MEIG1Q5JSS6 88 aa3.35□□□□□ -1.87
SRP54-211ENST00000556445 LCA10Q71F78 164 aa3.35□□□□□ -1.87
SRP54-211ENST00000556445 MUSTN1Q8IVN3 82 aa3.35□□□□□ -1.87
SRP54-211ENST00000556445 Q8IZM0 81 aa3.35□□□□□ -1.87
SRP54-211ENST00000556445 C15orf53Q8NAA6 179 aa3.35□□□□□ -1.87
SRP54-211ENST00000556445 MUC7Q8TAX7 377 aa3.35□□□□□ -1.87
SRP54-211ENST00000556445 NBPF19A0A087WUL8 3843 aa3.35□□□□□ -1.87
SRP54-211ENST00000556445 SVEP1Q4LDE5 3571 aa3.35□□□□□ -1.87
SRP54-211ENST00000556445 TRAV10A0A0B4J240 114 aa3.34□□□□□ -1.87
SRP54-211ENST00000556445 IGKV3OR2-268A0A0C4DH90 116 aa3.34□□□□□ -1.87
SRP54-211ENST00000556445 IBA57-AS1B1ANH7 110 aa3.34□□□□□ -1.87
SRP54-211ENST00000556445 COX6CP09669 75 aa3.34□□□□□ -1.87
SRP54-211ENST00000556445 TLX1NBP0CAT3 122 aa3.34□□□□□ -1.87
SRP54-211ENST00000556445 KPRPQ5T749 579 aaPredicted RBP3.34□□□□□ -1.87
SRP54-211ENST00000556445 RMI2Q96E14 147 aa3.34□□□□□ -1.87
SRP54-211ENST00000556445 ZNF625Q96I27 306 aaPredicted RBP3.34□□□□□ -1.87
SRP54-211ENST00000556445 ZNF469Q96JG9 3925 aaPredicted RBP3.34□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 86.6 ms