RNA–Protein interactions for RNA: ENST00000556374.5

ATXN3-241, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,083 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-241ENST00000556374 IBA57-AS1B1ANH7 110 aa3.08□□□□□ -1.92
ATXN3-241ENST00000556374 H0YGX0 51 aa3.08□□□□□ -1.92
ATXN3-241ENST00000556374 PRM2P04554 102 aa3.08□□□□□ -1.92
ATXN3-241ENST00000556374 LINC00694P0DN24 101 aa3.08□□□□□ -1.92
ATXN3-241ENST00000556374 RPL35AP18077 110 aaKnown RBP3.08□□□□□ -1.92
ATXN3-241ENST00000556374 RPL28P46779 137 aaKnown RBP3.08□□□□□ -1.92
ATXN3-241ENST00000556374 COX6A2Q02221 97 aa3.08□□□□□ -1.92
ATXN3-241ENST00000556374 GAGE2AQ6NT46 116 aa3.08□□□□□ -1.92
ATXN3-241ENST00000556374 MIR7-3HGQ8N6C7 128 aa3.08□□□□□ -1.92
ATXN3-241ENST00000556374 OR13C6PQ8NH95 151 aa3.08□□□□□ -1.92
ATXN3-241ENST00000556374 FAM110AQ9BQ89 295 aa3.08□□□□□ -1.92
ATXN3-241ENST00000556374 SS18L2Q9UHA2 77 aa3.08□□□□□ -1.92
ATXN3-241ENST00000556374 FAM236AA0A1B0GUQ0 79 aa3.07□□□□□ -1.92
ATXN3-241ENST00000556374 FAM236BA0A1B0GV22 79 aa3.07□□□□□ -1.92
ATXN3-241ENST00000556374 F5H768 121 aa3.07□□□□□ -1.92
ATXN3-241ENST00000556374 BAALC-AS2P0C853 105 aa3.07□□□□□ -1.92
ATXN3-241ENST00000556374 CXCL5P42830 114 aa3.07□□□□□ -1.92
ATXN3-241ENST00000556374 S100A7L2Q5SY68 101 aa3.07□□□□□ -1.92
ATXN3-241ENST00000556374 NTM-AS1Q6ZSK4 140 aa3.07□□□□□ -1.92
ATXN3-241ENST00000556374 FAM104AQ969W3 186 aa3.07□□□□□ -1.92
ATXN3-241ENST00000556374 CITED2Q99967 270 aaPredicted RBP3.07□□□□□ -1.92
ATXN3-241ENST00000556374 TMEM126AQ9H061 195 aa3.07□□□□□ -1.92
ATXN3-241ENST00000556374 DNAH1Q9P2D7 4330 aa3.07□□□□□ -1.92
ATXN3-241ENST00000556374 TRBV6-8A0A0A6YYG3 113 aa3.06□□□□□ -1.92
ATXN3-241ENST00000556374 ATOX1O00244 68 aa3.06□□□□□ -1.92
ATXN3-241ENST00000556374 NDUFA7O95182 113 aa3.06□□□□□ -1.92
ATXN3-241ENST00000556374 PFN2P35080 140 aa3.06□□□□□ -1.92
ATXN3-241ENST00000556374 C6orf226Q5I0X4 101 aa3.06□□□□□ -1.92
ATXN3-241ENST00000556374 C9orf153Q5TBE3 101 aa3.06□□□□□ -1.92
ATXN3-241ENST00000556374 SOSTDC1Q6X4U4 206 aa3.06□□□□□ -1.92
ATXN3-241ENST00000556374 C11orf68Q9H3H3 251 aaKnown RBP3.06□□□□□ -1.92
ATXN3-241ENST00000556374 ORMDL1Q9P0S3 153 aa3.06□□□□□ -1.92
ATXN3-241ENST00000556374 Q9UF83 564 aa3.06□□□□□ -1.92
ATXN3-241ENST00000556374 COL7A1Q02388 2944 aa3.06□□□□□ -1.92
ATXN3-241ENST00000556374 A0A087WZ39 114 aa3.05□□□□□ -1.92
ATXN3-241ENST00000556374 LOC100131303A0A0U1RQF7 123 aa3.05□□□□□ -1.92
ATXN3-241ENST00000556374 A0A1B0GX51 115 aa3.05□□□□□ -1.92
ATXN3-241ENST00000556374 SMIM9A6NGZ8 99 aa3.05□□□□□ -1.92
ATXN3-241ENST00000556374 IGLV1-51P01701 117 aa3.05□□□□□ -1.92
ATXN3-241ENST00000556374 IGHV4-30-4P0DP06 118 aa3.05□□□□□ -1.92
ATXN3-241ENST00000556374 DEFB130BP0DP73 79 aa3.05□□□□□ -1.92
ATXN3-241ENST00000556374 DEFB130AP0DP74 79 aa3.05□□□□□ -1.92
ATXN3-241ENST00000556374 LINC01561Q8N1V8 128 aa3.05□□□□□ -1.92
ATXN3-241ENST00000556374 KIR2DL5BQ8NHK3 375 aa3.05□□□□□ -1.92
ATXN3-241ENST00000556374 SMIM11BQ8TCY0 68 aa3.05□□□□□ -1.92
ATXN3-241ENST00000556374 MRAPQ8TCY5 172 aa3.05□□□□□ -1.92
ATXN3-241ENST00000556374 C16orf95Q9H693 158 aa3.05□□□□□ -1.92
ATXN3-241ENST00000556374 ESM1Q9NQ30 184 aa3.05□□□□□ -1.92
ATXN3-241ENST00000556374 TENM2Q9NT68 2774 aa3.05□□□□□ -1.92
ATXN3-241ENST00000556374 WNK2Q9Y3S1 2297 aa3.04□□□□□ -1.92
ATXN3-241ENST00000556374 DNAH3Q8TD57 4116 aa3.04□□□□□ -1.92
ATXN3-241ENST00000556374 LINC00959A0A1B0GUT2 108 aa3.04□□□□□ -1.92
ATXN3-241ENST00000556374 KRTAP9-6A8MVA2 160 aa3.04□□□□□ -1.92
ATXN3-241ENST00000556374 JMJD7-PLA2G4BH0Y9G9 81 aa3.04□□□□□ -1.92
ATXN3-241ENST00000556374 CCDC179H3BU77 68 aa3.04□□□□□ -1.92
ATXN3-241ENST00000556374 UQCRQO14949 82 aa3.04□□□□□ -1.92
ATXN3-241ENST00000556374 LECT2O14960 151 aa3.04□□□□□ -1.92
ATXN3-241ENST00000556374 PRB2P02812 416 aaPredicted RBP3.04□□□□□ -1.92
ATXN3-241ENST00000556374 XCL1P47992 114 aa3.04□□□□□ -1.92
ATXN3-241ENST00000556374 APOC4P55056 127 aa3.04□□□□□ -1.92
ATXN3-241ENST00000556374 KPRPQ5T749 579 aaPredicted RBP3.04□□□□□ -1.92
ATXN3-241ENST00000556374 ATP5EP2Q5VTU8 51 aa3.04□□□□□ -1.92
ATXN3-241ENST00000556374 Q6JHZ5 121 aa3.04□□□□□ -1.92
ATXN3-241ENST00000556374 SDIM1Q6ZPB5 146 aa3.04□□□□□ -1.92
ATXN3-241ENST00000556374 C5orf38Q86SI9 138 aa3.04□□□□□ -1.92
ATXN3-241ENST00000556374 Q8IZM0 81 aa3.04□□□□□ -1.92
ATXN3-241ENST00000556374 MUC7Q8TAX7 377 aa3.04□□□□□ -1.92
ATXN3-241ENST00000556374 WFDC10AQ9H1F0 79 aa3.04□□□□□ -1.92
ATXN3-241ENST00000556374 Q9HAA7 133 aa3.04□□□□□ -1.92
ATXN3-241ENST00000556374 PRO0255Q9UI72 69 aa3.04□□□□□ -1.92
ATXN3-241ENST00000556374 DNAH9Q9NYC9 4486 aa3.03□□□□□ -1.92
ATXN3-241ENST00000556374 IGLV4-60A0A075B6I1 120 aa3.03□□□□□ -1.92
ATXN3-241ENST00000556374 PLAC8L1A1L4L8 177 aa3.03□□□□□ -1.92
ATXN3-241ENST00000556374 LYRM9A8MSI8 78 aa3.03□□□□□ -1.92
ATXN3-241ENST00000556374 H3BQ85 93 aa3.03□□□□□ -1.92
ATXN3-241ENST00000556374 NDUFC2O95298 119 aa3.03□□□□□ -1.92
ATXN3-241ENST00000556374 CCL18P55774 89 aa3.03□□□□□ -1.92
ATXN3-241ENST00000556374 COX17Q14061 63 aa3.03□□□□□ -1.92
ATXN3-241ENST00000556374 C9orf66Q5T8R8 295 aa3.03□□□□□ -1.92
ATXN3-241ENST00000556374 CLPSL2Q6UWE3 100 aa3.03□□□□□ -1.92
ATXN3-241ENST00000556374 SMIM29Q86T20 159 aa3.03□□□□□ -1.92
ATXN3-241ENST00000556374 LINC00337Q8N6G1 96 aa3.03□□□□□ -1.92
ATXN3-241ENST00000556374 LINC01006Q8NI28 216 aa3.03□□□□□ -1.92
ATXN3-241ENST00000556374 FAM218AQ96MZ4 157 aa3.03□□□□□ -1.92
ATXN3-241ENST00000556374 NACAE9PAV3 2078 aa3.03□□□□□ -1.92
ATXN3-241ENST00000556374 LYSTQ99698 3801 aa3.03□□□□□ -1.92
ATXN3-241ENST00000556374 IGKV2-28A0A075B6P5 120 aa3.02□□□□□ -1.93
ATXN3-241ENST00000556374 IGHV3OR16-9A0A0B4J2B5 98 aa3.02□□□□□ -1.93
ATXN3-241ENST00000556374 TMEM256-PLSCR3K7ERE1 68 aa3.02□□□□□ -1.93
ATXN3-241ENST00000556374 IGKV2D-28P01615 120 aa3.02□□□□□ -1.93
ATXN3-241ENST00000556374 ANGP03950 147 aaKnown RBP3.02□□□□□ -1.93
ATXN3-241ENST00000556374 KRTAP10-12P60413 245 aa3.02□□□□□ -1.93
ATXN3-241ENST00000556374 DAD1P61803 113 aa3.02□□□□□ -1.93
ATXN3-241ENST00000556374 C3orf22Q8N5N4 141 aa3.02□□□□□ -1.93
ATXN3-241ENST00000556374 UBL5Q9BZL1 73 aa3.02□□□□□ -1.93
ATXN3-241ENST00000556374 C14orf132Q9NPU4 83 aa3.02□□□□□ -1.93
ATXN3-241ENST00000556374 NCR3O14931 201 aa3.01□□□□□ -1.93
ATXN3-241ENST00000556374 GIG44P09565 113 aaPredicted RBP3.01□□□□□ -1.93
ATXN3-241ENST00000556374 COX7CP15954 63 aa3.01□□□□□ -1.93
ATXN3-241ENST00000556374 RPL18AQ02543 176 aaKnown RBP3.01□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 78.7 ms