RNA–Protein interactions for RNA: ENST00000556353.1

PRPF39-209, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 2

Gene PRPF39, Length 687 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-209ENST00000556353 RPL30P62888 115 aaKnown RBP2.52□□□□□ -2.01
PRPF39-209ENST00000556353 PLGLAQ15195 96 aa2.52□□□□□ -2.01
PRPF39-209ENST00000556353 Q6ZQT7 251 aa2.52□□□□□ -2.01
PRPF39-209ENST00000556353 LINC00173Q6ZV60 143 aa2.52□□□□□ -2.01
PRPF39-209ENST00000556353 CYB561D1Q8N8Q1 229 aa2.52□□□□□ -2.01
PRPF39-209ENST00000556353 ODF3Q96PU9 254 aa2.52□□□□□ -2.01
PRPF39-209ENST00000556353 SLC25A2Q9BXI2 301 aa2.52□□□□□ -2.01
PRPF39-209ENST00000556353 IL36BQ9NZH7 164 aa2.52□□□□□ -2.01
PRPF39-209ENST00000556353 ABRACLQ9P1F3 81 aa2.52□□□□□ -2.01
PRPF39-209ENST00000556353 EPDR1Q9UM22 224 aa2.52□□□□□ -2.01
PRPF39-209ENST00000556353 S4R3C0 116 aa2.52□□□□□ -2.01
PRPF39-209ENST00000556353 PKHD1L1Q86WI1 4243 aa2.52□□□□□ -2.01
PRPF39-209ENST00000556353 DMBT1Q9UGM3 2413 aaPredicted RBP2.51□□□□□ -2.01
PRPF39-209ENST00000556353 IGLV2-18A0A075B6J9 118 aa2.51□□□□□ -2.01
PRPF39-209ENST00000556353 TRAV14DV4A0A0A6YYC5 116 aa2.51□□□□□ -2.01
PRPF39-209ENST00000556353 TRAV3A0A0B4J244 114 aa2.51□□□□□ -2.01
PRPF39-209ENST00000556353 TRAV1-1A0A0B4J248 108 aa2.51□□□□□ -2.01
PRPF39-209ENST00000556353 PIGBOS1A0A0B4J2F0 54 aa2.51□□□□□ -2.01
PRPF39-209ENST00000556353 C2orf70A6NJV1 201 aa2.51□□□□□ -2.01
PRPF39-209ENST00000556353 F2Z2F3 143 aa2.51□□□□□ -2.01
PRPF39-209ENST00000556353 TIMM17BO60830 172 aa2.51□□□□□ -2.01
PRPF39-209ENST00000556353 CHTF8P0CG12 524 aa2.51□□□□□ -2.01
PRPF39-209ENST00000556353 UBE2AP49459 152 aa2.51□□□□□ -2.01
PRPF39-209ENST00000556353 UBE2G1P62253 170 aa2.51□□□□□ -2.01
PRPF39-209ENST00000556353 KLK9Q2XQG4 91 aa2.51□□□□□ -2.01
PRPF39-209ENST00000556353 DEFB114Q30KQ6 69 aa2.51□□□□□ -2.01
PRPF39-209ENST00000556353 TMEM256Q8N2U0 113 aa2.51□□□□□ -2.01
PRPF39-209ENST00000556353 TOMM5Q8N4H5 51 aa2.51□□□□□ -2.01
PRPF39-209ENST00000556353 Q8N8P6 123 aa2.51□□□□□ -2.01
PRPF39-209ENST00000556353 RNF5Q99942 180 aa2.51□□□□□ -2.01
PRPF39-209ENST00000556353 NPCDR1Q9BY65 106 aa2.51□□□□□ -2.01
PRPF39-209ENST00000556353 MANBALQ9NQG1 85 aa2.51□□□□□ -2.01
PRPF39-209ENST00000556353 HIGD1BQ9P298 99 aa2.51□□□□□ -2.01
PRPF39-209ENST00000556353 KLK9Q9UKQ9 250 aa2.51□□□□□ -2.01
PRPF39-209ENST00000556353 ZNF706Q9Y5V0 76 aaPredicted RBP2.51□□□□□ -2.01
PRPF39-209ENST00000556353 IGLV11-55A0A075B6I3 123 aa2.5□□□□□ -2.01
PRPF39-209ENST00000556353 K7ERJ3 54 aa2.5□□□□□ -2.01
PRPF39-209ENST00000556353 PEX7O00628 323 aa2.5□□□□□ -2.01
PRPF39-209ENST00000556353 IGLV2-8P01709 118 aa2.5□□□□□ -2.01
PRPF39-209ENST00000556353 CCKP06307 115 aa2.5□□□□□ -2.01
PRPF39-209ENST00000556353 C3orf79P0CE67 100 aa2.5□□□□□ -2.01
PRPF39-209ENST00000556353 INAFM2P0DMQ5 153 aa2.5□□□□□ -2.01
PRPF39-209ENST00000556353 C2orf91Q6ZV80 131 aa2.5□□□□□ -2.01
PRPF39-209ENST00000556353 LINC00643Q86TS7 51 aa2.5□□□□□ -2.01
PRPF39-209ENST00000556353 USMG5Q96IX5 58 aa2.5□□□□□ -2.01
PRPF39-209ENST00000556353 NXT2Q9NPJ8 142 aaKnown RBP2.5□□□□□ -2.01
PRPF39-209ENST00000556353 ZNF355PQ9NSJ1 428 aa2.5□□□□□ -2.01
PRPF39-209ENST00000556353 IGHV3OR16-8A0A075B7F1 116 aa2.49□□□□□ -2.01
PRPF39-209ENST00000556353 TRAV1-2A0A0B4J238 106 aa2.49□□□□□ -2.01
PRPF39-209ENST00000556353 FAM223BA6NKX1 122 aa2.49□□□□□ -2.01
PRPF39-209ENST00000556353 APCSP02743 223 aa2.49□□□□□ -2.01
PRPF39-209ENST00000556353 CKS2P33552 79 aa2.49□□□□□ -2.01
PRPF39-209ENST00000556353 WT1-ASQ06250 92 aa2.49□□□□□ -2.01
PRPF39-209ENST00000556353 Q1T7F1 81 aa2.49□□□□□ -2.01
PRPF39-209ENST00000556353 DEFB135Q30KP9 77 aa2.49□□□□□ -2.01
PRPF39-209ENST00000556353 TMEM170BQ5T4T1 132 aa2.49□□□□□ -2.01
PRPF39-209ENST00000556353 Q5W150 140 aa2.49□□□□□ -2.01
PRPF39-209ENST00000556353 SDIM1Q6ZPB5 146 aa2.49□□□□□ -2.01
PRPF39-209ENST00000556353 CAMK2N1Q7Z7J9 78 aa2.49□□□□□ -2.01
PRPF39-209ENST00000556353 FAM223AQ8IWN6 122 aa2.49□□□□□ -2.01
PRPF39-209ENST00000556353 ZNF645Q8N7E2 425 aa2.49□□□□□ -2.01
PRPF39-209ENST00000556353 TMEM167AQ8TBQ9 72 aa2.49□□□□□ -2.01
PRPF39-209ENST00000556353 XAGE1AQ9HD64 81 aa2.49□□□□□ -2.01
PRPF39-209ENST00000556353 CCL28Q9NRJ3 127 aa2.49□□□□□ -2.01
PRPF39-209ENST00000556353 OSTCQ9NRP0 149 aa2.49□□□□□ -2.01
PRPF39-209ENST00000556353 TRAPPC1Q9Y5R8 145 aa2.49□□□□□ -2.01
PRPF39-209ENST00000556353 FLG2Q5D862 2391 aaPredicted RBP2.49□□□□□ -2.01
PRPF39-209ENST00000556353 FAT3Q8TDW7 4589 aa2.48□□□□□ -2.01
PRPF39-209ENST00000556353 IGHV3-21A0A0B4J1V1 117 aa2.48□□□□□ -2.01
PRPF39-209ENST00000556353 IGHV1-24A0A0C4DH33 117 aa2.48□□□□□ -2.01
PRPF39-209ENST00000556353 A6NN06 94 aa2.48□□□□□ -2.01
PRPF39-209ENST00000556353 K7EIM0 57 aa2.48□□□□□ -2.01
PRPF39-209ENST00000556353 FUSP35637 526 aaKnown RBP eCLIP2.48□□□□□ -2.01
PRPF39-209ENST00000556353 RPL27AP46776 148 aaKnown RBP2.48□□□□□ -2.01
PRPF39-209ENST00000556353 CIRBPQ14011 172 aaKnown RBP2.48□□□□□ -2.01
PRPF39-209ENST00000556353 SS18Q15532 418 aa2.48□□□□□ -2.01
PRPF39-209ENST00000556353 FAM104BQ5XKR9 115 aa2.48□□□□□ -2.01
PRPF39-209ENST00000556353 PATE2Q6UY27 113 aa2.48□□□□□ -2.01
PRPF39-209ENST00000556353 ZNF818PQ6ZRF7 136 aa2.48□□□□□ -2.01
PRPF39-209ENST00000556353 BAGE3Q86Y29 109 aa2.48□□□□□ -2.01
PRPF39-209ENST00000556353 BAGE2Q86Y30 109 aa2.48□□□□□ -2.01
PRPF39-209ENST00000556353 DYNLRB2Q8TF09 96 aa2.48□□□□□ -2.01
PRPF39-209ENST00000556353 MRPL35Q9NZE8 188 aaKnown RBP2.48□□□□□ -2.01
PRPF39-209ENST00000556353 LRP1Q07954 4544 aaKnown RBP2.47□□□□□ -2.01
PRPF39-209ENST00000556353 PPYP01298 95 aa2.47□□□□□ -2.01
PRPF39-209ENST00000556353 IGKV1-39P01597 117 aa2.47□□□□□ -2.01
PRPF39-209ENST00000556353 IGKV1D-39P04432 117 aa2.47□□□□□ -2.01
PRPF39-209ENST00000556353 CYP2G1PQ6ZSU1 146 aa2.47□□□□□ -2.01
PRPF39-209ENST00000556353 MIR17HGQ75NE6 70 aa2.47□□□□□ -2.01
PRPF39-209ENST00000556353 SMIM4Q8WVI0 70 aa2.47□□□□□ -2.01
PRPF39-209ENST00000556353 NMES1Q9C002 83 aa2.47□□□□□ -2.01
PRPF39-209ENST00000556353 MRPL36Q9P0J6 103 aaKnown RBP2.47□□□□□ -2.01
PRPF39-209ENST00000556353 IGHV3-49A0A0A0MS15 119 aa2.46□□□□□ -2.02
PRPF39-209ENST00000556353 IGHV3-74A0A0B4J1X5 117 aa2.46□□□□□ -2.02
PRPF39-209ENST00000556353 TRAV13-2A0A0B4J235 113 aa2.46□□□□□ -2.02
PRPF39-209ENST00000556353 I3L2K1 104 aa2.46□□□□□ -2.02
PRPF39-209ENST00000556353 DEFB4AO15263 64 aa2.46□□□□□ -2.02
PRPF39-209ENST00000556353 LY6G6CO95867 125 aa2.46□□□□□ -2.02
PRPF39-209ENST00000556353 CTSGP08311 255 aa2.46□□□□□ -2.02
PRPF39-209ENST00000556353 FXYD4P59646 89 aa2.46□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms