RNA–Protein interactions for RNA: ENST00000556305.1

CDKN3-210, Transcript of cyclin dependent kinase inhibitor 3, humanhuman

TSL 3

Gene CDKN3, Length 712 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN3-210ENST00000556305 SYNE1Q8NF91 8797 aaKnown RBP0.54□□□□□ -2.32
CDKN3-210ENST00000556305 CTAGE3PQ8IX95 158 aa0.54□□□□□ -2.32
CDKN3-210ENST00000556305 FLGP20930 4061 aaPredicted RBP0.54□□□□□ -2.32
CDKN3-210ENST00000556305 LOC105371267A0A1B0GV96 52 aa0.53□□□□□ -2.32
CDKN3-210ENST00000556305 TSPAN19P0C672 248 aa0.53□□□□□ -2.32
CDKN3-210ENST00000556305 SMCO1Q147U7 214 aa0.53□□□□□ -2.32
CDKN3-210ENST00000556305 OR2T2Q6IF00 324 aa0.53□□□□□ -2.32
CDKN3-210ENST00000556305 PRR15LQ9BU68 103 aa0.53□□□□□ -2.32
CDKN3-210ENST00000556305 LINC00846Q9NV44 126 aa0.53□□□□□ -2.32
CDKN3-210ENST00000556305 FAM236AA0A1B0GUQ0 79 aa0.52□□□□□ -2.33
CDKN3-210ENST00000556305 FAM236BA0A1B0GV22 79 aa0.52□□□□□ -2.33
CDKN3-210ENST00000556305 K7ERU9 68 aa0.52□□□□□ -2.33
CDKN3-210ENST00000556305 ELOF1P60002 83 aaKnown RBP0.52□□□□□ -2.33
CDKN3-210ENST00000556305 SMIM21Q3B7S5 101 aa0.52□□□□□ -2.33
CDKN3-210ENST00000556305 FAM74A4Q5TZK3 123 aa0.52□□□□□ -2.33
CDKN3-210ENST00000556305 TSTD1Q8NFU3 115 aa0.52□□□□□ -2.33
CDKN3-210ENST00000556305 VSTM2AQ8TAG5 236 aa0.52□□□□□ -2.33
CDKN3-210ENST00000556305 IFI27L1Q96BM0 104 aa0.52□□□□□ -2.33
CDKN3-210ENST00000556305 PSME4Q14997 1843 aa0.52□□□□□ -2.33
CDKN3-210ENST00000556305 LINC00694P0DN24 101 aa0.51□□□□□ -2.33
CDKN3-210ENST00000556305 COX4I1P13073 169 aa0.51□□□□□ -2.33
CDKN3-210ENST00000556305 MYH9P35579 1960 aaKnown RBP0.51□□□□□ -2.33
CDKN3-210ENST00000556305 EMX2Q04743 252 aa0.51□□□□□ -2.33
CDKN3-210ENST00000556305 SSBP1Q04837 148 aaKnown RBP0.51□□□□□ -2.33
CDKN3-210ENST00000556305 SPANXN1Q5VSR9 72 aa0.51□□□□□ -2.33
CDKN3-210ENST00000556305 VMO1Q7Z5L0 202 aa0.51□□□□□ -2.33
CDKN3-210ENST00000556305 PSMG3Q9BT73 122 aaPredicted RBP0.51□□□□□ -2.33
CDKN3-210ENST00000556305 M0R129 80 aa0.5□□□□□ -2.33
CDKN3-210ENST00000556305 MT1HL1P0DM35 61 aa0.5□□□□□ -2.33
CDKN3-210ENST00000556305 SPCS2Q15005 226 aa0.5□□□□□ -2.33
CDKN3-210ENST00000556305 LINC01545Q5VT33 79 aa0.5□□□□□ -2.33
CDKN3-210ENST00000556305 BPESC1Q9GZL8 116 aa0.5□□□□□ -2.33
CDKN3-210ENST00000556305 DEFB121Q5J5C9 76 aa0.49□□□□□ -2.33
CDKN3-210ENST00000556305 MIC13Q5XKP0 118 aa0.49□□□□□ -2.33
CDKN3-210ENST00000556305 RPL7L1Q6DKI1 246 aaKnown RBP0.49□□□□□ -2.33
CDKN3-210ENST00000556305 SPRR2FQ96RM1 72 aa0.49□□□□□ -2.33
CDKN3-210ENST00000556305 PFDN5Q99471 154 aa0.49□□□□□ -2.33
CDKN3-210ENST00000556305 NDUFA12Q9UI09 145 aa0.49□□□□□ -2.33
CDKN3-210ENST00000556305 TRAV12-3A0A0B4J271 114 aa0.48□□□□□ -2.33
CDKN3-210ENST00000556305 A6NIN4 97 aa0.48□□□□□ -2.33
CDKN3-210ENST00000556305 NPFFO15130 113 aa0.48□□□□□ -2.33
CDKN3-210ENST00000556305 PIRTP0C851 137 aa0.48□□□□□ -2.33
CDKN3-210ENST00000556305 RRAS2P62070 204 aaPredicted RBP0.48□□□□□ -2.33
CDKN3-210ENST00000556305 MT1HP80294 61 aa0.48□□□□□ -2.33
CDKN3-210ENST00000556305 SLC48A1Q6P1K1 146 aa0.48□□□□□ -2.33
CDKN3-210ENST00000556305 SCIMPQ6UWF3 145 aa0.48□□□□□ -2.33
CDKN3-210ENST00000556305 C4orf33Q8N1A6 199 aa0.48□□□□□ -2.33
CDKN3-210ENST00000556305 TPT1P8Q9HAU6 139 aa0.48□□□□□ -2.33
CDKN3-210ENST00000556305 PIPP12273 146 aaPredicted RBP0.47□□□□□ -2.33
CDKN3-210ENST00000556305 CCL3L1P16619 93 aa0.47□□□□□ -2.33
CDKN3-210ENST00000556305 NPC2P61916 151 aa0.47□□□□□ -2.33
CDKN3-210ENST00000556305 COPZ1P61923 177 aa0.47□□□□□ -2.33
CDKN3-210ENST00000556305 Q6ZUT4 128 aa0.47□□□□□ -2.33
CDKN3-210ENST00000556305 TCEAL4Q96EI5 215 aa0.47□□□□□ -2.33
CDKN3-210ENST00000556305 RPRMQ9NS64 109 aa0.47□□□□□ -2.33
CDKN3-210ENST00000556305 PAIP2BQ9ULR5 123 aaKnown RBP0.47□□□□□ -2.33
CDKN3-210ENST00000556305 GUCA1AP43080 201 aaPredicted RBP0.46□□□□□ -2.34
CDKN3-210ENST00000556305 RPS25P62851 125 aaKnown RBP0.46□□□□□ -2.34
CDKN3-210ENST00000556305 C20orf197Q8N268 126 aa0.46□□□□□ -2.34
CDKN3-210ENST00000556305 COX7B2Q8TF08 81 aa0.46□□□□□ -2.34
CDKN3-210ENST00000556305 PROK2Q9HC23 129 aa0.46□□□□□ -2.34
CDKN3-210ENST00000556305 V9GYV3 84 aa0.46□□□□□ -2.34
CDKN3-210ENST00000556305 IFNA17P01571 189 aa0.45□□□□□ -2.34
CDKN3-210ENST00000556305 APODP05090 189 aa0.45□□□□□ -2.34
CDKN3-210ENST00000556305 IL5P05113 134 aa0.45□□□□□ -2.34
CDKN3-210ENST00000556305 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa0.45□□□□□ -2.34
CDKN3-210ENST00000556305 KCNRGQ8N5I3 272 aa0.45□□□□□ -2.34
CDKN3-210ENST00000556305 SMIM11BQ8TCY0 68 aa0.45□□□□□ -2.34
CDKN3-210ENST00000556305 TMEM242Q9NWH2 141 aa0.45□□□□□ -2.34
CDKN3-210ENST00000556305 SPEF2Q9C093 1822 aa0.44□□□□□ -2.34
CDKN3-210ENST00000556305 TRBV7-1A0A0A6YYK4 115 aa0.44□□□□□ -2.34
CDKN3-210ENST00000556305 DEFB109BQ30KR1 87 aa0.44□□□□□ -2.34
CDKN3-210ENST00000556305 C9orf116Q5BN46 136 aaPredicted RBP0.44□□□□□ -2.34
CDKN3-210ENST00000556305 SPTSSAQ969W0 71 aa0.44□□□□□ -2.34
CDKN3-210ENST00000556305 SCP2D1Q9UJQ7 156 aa0.44□□□□□ -2.34
CDKN3-210ENST00000556305 A0A087WTM6 91 aa0.43□□□□□ -2.34
CDKN3-210ENST00000556305 PITX3O75364 302 aa0.43□□□□□ -2.34
CDKN3-210ENST00000556305 SNCGO76070 127 aa0.43□□□□□ -2.34
CDKN3-210ENST00000556305 KRTAP20-2Q3LI61 65 aa0.43□□□□□ -2.34
CDKN3-210ENST00000556305 DEFB104AQ8WTQ1 72 aa0.43□□□□□ -2.34
CDKN3-210ENST00000556305 TMEM191AQ9H0A3 160 aa0.43□□□□□ -2.34
CDKN3-210ENST00000556305 UBE2G1P62253 170 aa0.42□□□□□ -2.34
CDKN3-210ENST00000556305 S100A12P80511 92 aa0.42□□□□□ -2.34
CDKN3-210ENST00000556305 TFF3Q07654 80 aa0.42□□□□□ -2.34
CDKN3-210ENST00000556305 CCDC167Q9P0B6 97 aa0.42□□□□□ -2.34
CDKN3-210ENST00000556305 MYH8P13535 1937 aa0.42□□□□□ -2.34
CDKN3-210ENST00000556305 NDUFB6O95139 128 aa0.41□□□□□ -2.34
CDKN3-210ENST00000556305 CBLN1P23435 193 aa0.41□□□□□ -2.34
CDKN3-210ENST00000556305 COX6A2Q02221 97 aa0.41□□□□□ -2.34
CDKN3-210ENST00000556305 MYH7P12883 1935 aa0.4□□□□□ -2.34
CDKN3-210ENST00000556305 MYOM3Q5VTT5 1437 aa0.4□□□□□ -2.34
CDKN3-210ENST00000556305 ANKRD36CQ5JPF3 1778 aa0.4□□□□□ -2.35
CDKN3-210ENST00000556305 PDCD11Q14690 1871 aaKnown RBP0.4□□□□□ -2.35
CDKN3-210ENST00000556305 GVQW2A0A096LPI5 108 aaPredicted RBP0.4□□□□□ -2.35
CDKN3-210ENST00000556305 LYNX1G3V0Z9 82 aa0.4□□□□□ -2.35
CDKN3-210ENST00000556305 ACYP2P14621 99 aa0.4□□□□□ -2.35
CDKN3-210ENST00000556305 ARPC4P59998 168 aa0.4□□□□□ -2.35
CDKN3-210ENST00000556305 KRTAP19-2Q3LHN2 52 aa0.4□□□□□ -2.35
CDKN3-210ENST00000556305 CCDC58Q4VC31 144 aa0.4□□□□□ -2.35
CDKN3-210ENST00000556305 C10orf82Q8WW14 230 aa0.4□□□□□ -2.35
Retrieved 100 of 20,778 RNA–protein pairs in 76.7 ms