RNA–Protein interactions for RNA: ENST00000556083.1

ACTN1-216, Transcript of actinin alpha 1, humanhuman

TSL 1 (best)

Gene ACTN1, Length 4,674 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-216ENST00000556083 PRR3P79522 188 aaKnown RBP7.42□□□□□ -1.22
ACTN1-216ENST00000556083 LINC00167Q96N53 147 aa7.42□□□□□ -1.22
ACTN1-216ENST00000556083 ARHGAP32A7KAX9 2087 aa7.41□□□□□ -1.22
ACTN1-216ENST00000556083 PMAIP1Q13794 54 aa7.41□□□□□ -1.22
ACTN1-216ENST00000556083 RAI1Q7Z5J4 1906 aaPredicted RBP7.41□□□□□ -1.22
ACTN1-216ENST00000556083 X6R8D5 127 aa7.41□□□□□ -1.22
ACTN1-216ENST00000556083 Q6ZRX8 168 aa7.4□□□□□ -1.22
ACTN1-216ENST00000556083 SPATA3Q8NHX4 192 aa7.4□□□□□ -1.22
ACTN1-216ENST00000556083 MOBPQ13875 183 aa7.4□□□□□ -1.22
ACTN1-216ENST00000556083 NBDYA0A0U1RRE5 68 aa7.4□□□□□ -1.23
ACTN1-216ENST00000556083 A0A0C4DFX4 3053 aa7.39□□□□□ -1.23
ACTN1-216ENST00000556083 KIAA0087Q14695 138 aa7.39□□□□□ -1.23
ACTN1-216ENST00000556083 C6orf48Q9UBA6 75 aa7.39□□□□□ -1.23
ACTN1-216ENST00000556083 RPS28P62857 69 aaKnown RBP7.39□□□□□ -1.23
ACTN1-216ENST00000556083 A0A087WVE0 104 aa7.39□□□□□ -1.23
ACTN1-216ENST00000556083 PRLHP81277 87 aa7.39□□□□□ -1.23
ACTN1-216ENST00000556083 A8MTW9 85 aa7.38□□□□□ -1.23
ACTN1-216ENST00000556083 DNAH10OSP0CZ25 163 aa7.38□□□□□ -1.23
ACTN1-216ENST00000556083 FLNBO75369 2602 aaKnown RBP7.38□□□□□ -1.23
ACTN1-216ENST00000556083 RPL37AP61513 92 aaKnown RBP7.38□□□□□ -1.23
ACTN1-216ENST00000556083 RANBP2P49792 3224 aaKnown RBP7.38□□□□□ -1.23
ACTN1-216ENST00000556083 TRBV7-4A0A0J9YYF1 115 aa7.38□□□□□ -1.23
ACTN1-216ENST00000556083 ABCA12Q86UK0 2595 aa7.38□□□□□ -1.23
ACTN1-216ENST00000556083 WWC2-AS2Q96NR7 200 aa7.37□□□□□ -1.23
ACTN1-216ENST00000556083 LOC101927531A0A1B0GV80 90 aa7.37□□□□□ -1.23
ACTN1-216ENST00000556083 ERC2-IT1O76042 136 aa7.36□□□□□ -1.23
ACTN1-216ENST00000556083 PLA2G1BP04054 148 aaKnown RBP7.36□□□□□ -1.23
ACTN1-216ENST00000556083 PCOTHQ58A44 107 aa7.36□□□□□ -1.23
ACTN1-216ENST00000556083 USP9XQ93008 2570 aaPredicted RBP7.36□□□□□ -1.23
ACTN1-216ENST00000556083 SBSPONQ8IVN8 264 aa7.36□□□□□ -1.23
ACTN1-216ENST00000556083 Q8NAQ8 132 aa7.35□□□□□ -1.23
ACTN1-216ENST00000556083 JMJD1CQ15652 2540 aa7.35□□□□□ -1.23
ACTN1-216ENST00000556083 AGRNO00468 2067 aa7.35□□□□□ -1.23
ACTN1-216ENST00000556083 SPAG11AQ6PDA7 123 aa7.35□□□□□ -1.23
ACTN1-216ENST00000556083 LRRK2Q5S007 2527 aa7.35□□□□□ -1.23
ACTN1-216ENST00000556083 TRAV22A0A0B4J277 110 aa7.34□□□□□ -1.24
ACTN1-216ENST00000556083 A0A1B0GU69 56 aa7.34□□□□□ -1.24
ACTN1-216ENST00000556083 EXPH5Q8NEV8 1989 aa7.33□□□□□ -1.24
ACTN1-216ENST00000556083 Q6ZQT0 140 aa7.33□□□□□ -1.24
ACTN1-216ENST00000556083 RTL8CO15255 209 aa7.33□□□□□ -1.24
ACTN1-216ENST00000556083 LINC00313P59037 77 aa7.32□□□□□ -1.24
ACTN1-216ENST00000556083 C7orf65Q6ZTY9 151 aa7.32□□□□□ -1.24
ACTN1-216ENST00000556083 SSBP3-AS1Q7Z2R9 100 aa7.31□□□□□ -1.24
ACTN1-216ENST00000556083 DNAH12Q6ZR08 3092 aa7.31□□□□□ -1.24
ACTN1-216ENST00000556083 TET2Q6N021 2002 aaPredicted RBP7.31□□□□□ -1.24
ACTN1-216ENST00000556083 TYMSOSQ8TAI1 123 aa7.31□□□□□ -1.24
ACTN1-216ENST00000556083 FN1P02751 2386 aaKnown RBP7.31□□□□□ -1.24
ACTN1-216ENST00000556083 KRTAP24-1Q3LI83 254 aa7.31□□□□□ -1.24
ACTN1-216ENST00000556083 LINC00476Q8WZB0 136 aa7.31□□□□□ -1.24
ACTN1-216ENST00000556083 IGKV2D-30A0A075B6S6 120 aa7.3□□□□□ -1.24
ACTN1-216ENST00000556083 IGKV2-30P06310 120 aa7.3□□□□□ -1.24
ACTN1-216ENST00000556083 SOSTDC1Q6X4U4 206 aa7.3□□□□□ -1.24
ACTN1-216ENST00000556083 SMIM29Q86T20 159 aa7.3□□□□□ -1.24
ACTN1-216ENST00000556083 CDIP1Q9H305 208 aa7.3□□□□□ -1.24
ACTN1-216ENST00000556083 COL4A2P08572 1712 aa7.3□□□□□ -1.24
ACTN1-216ENST00000556083 IGLV6-57P01721 117 aa7.29□□□□□ -1.24
ACTN1-216ENST00000556083 EPM2AB3EWF7 344 aa7.28□□□□□ -1.24
ACTN1-216ENST00000556083 SPACA4Q8TDM5 124 aa7.28□□□□□ -1.24
ACTN1-216ENST00000556083 PRO0628Q9UI54 55 aa7.28□□□□□ -1.24
ACTN1-216ENST00000556083 PLA2G2DQ9UNK4 145 aa7.28□□□□□ -1.24
ACTN1-216ENST00000556083 LINC00588Q9Y4M8 146 aa7.28□□□□□ -1.24
ACTN1-216ENST00000556083 KCNQ1DNQ9H478 68 aa7.27□□□□□ -1.25
ACTN1-216ENST00000556083 A8MWP4 228 aa7.27□□□□□ -1.25
ACTN1-216ENST00000556083 SPINK1P00995 79 aa7.27□□□□□ -1.25
ACTN1-216ENST00000556083 SPTBN5Q9NRC6 3674 aaKnown RBP7.27□□□□□ -1.25
ACTN1-216ENST00000556083 MKI67P46013 3256 aaKnown RBP7.26□□□□□ -1.25
ACTN1-216ENST00000556083 ATP11AUNQ6ZP68 121 aa7.26□□□□□ -1.25
ACTN1-216ENST00000556083 PKD1L2Q7Z442 2459 aa7.26□□□□□ -1.25
ACTN1-216ENST00000556083 SERTAD4-AS1Q5TG53 156 aa7.25□□□□□ -1.25
ACTN1-216ENST00000556083 TLX1NBP0CAT3 122 aa7.25□□□□□ -1.25
ACTN1-216ENST00000556083 PRO0461Q9UI25 63 aa7.25□□□□□ -1.25
ACTN1-216ENST00000556083 CYP4F30PQ9H0H9 118 aa7.25□□□□□ -1.25
ACTN1-216ENST00000556083 PRR34Q9NV39 138 aa7.24□□□□□ -1.25
ACTN1-216ENST00000556083 USP9YO00507 2555 aaPredicted RBP7.24□□□□□ -1.25
ACTN1-216ENST00000556083 HTTP42858 3142 aa7.24□□□□□ -1.25
ACTN1-216ENST00000556083 LAMA3Q16787 3333 aa7.23□□□□□ -1.25
ACTN1-216ENST00000556083 PSPHP1O15172 72 aa7.23□□□□□ -1.25
ACTN1-216ENST00000556083 LINC00336Q6ZUF6 198 aa7.23□□□□□ -1.25
ACTN1-216ENST00000556083 LINC00612Q8N6U2 182 aa7.23□□□□□ -1.25
ACTN1-216ENST00000556083 MRPL34Q9BQ48 92 aaKnown RBP7.23□□□□□ -1.25
ACTN1-216ENST00000556083 DEFB116Q30KQ4 102 aa7.23□□□□□ -1.25
ACTN1-216ENST00000556083 C19orf73Q9NVV2 129 aa7.23□□□□□ -1.25
ACTN1-216ENST00000556083 TLN2Q9Y4G6 2542 aa7.22□□□□□ -1.25
ACTN1-216ENST00000556083 IGLV1-50A0A075B6I6 118 aa7.22□□□□□ -1.25
ACTN1-216ENST00000556083 PHF5AQ7RTV0 110 aaKnown RBP7.22□□□□□ -1.25
ACTN1-216ENST00000556083 ST20-AS1Q8NBB2 130 aa7.21□□□□□ -1.26
ACTN1-216ENST00000556083 CSNK1G2-AS1Q8NCQ2 148 aa7.21□□□□□ -1.26
ACTN1-216ENST00000556083 MUC4Q99102 2169 aa7.2□□□□□ -1.26
ACTN1-216ENST00000556083 SMCPP49901 116 aaPredicted RBP7.2□□□□□ -1.26
ACTN1-216ENST00000556083 BRCA2P51587 3418 aa7.2□□□□□ -1.26
ACTN1-216ENST00000556083 FAM218AQ96MZ4 157 aa7.2□□□□□ -1.26
ACTN1-216ENST00000556083 F8P00451 2351 aa7.19□□□□□ -1.26
ACTN1-216ENST00000556083 LINC00528Q8N1L1 170 aa7.19□□□□□ -1.26
ACTN1-216ENST00000556083 RETNLBQ9BQ08 111 aa7.19□□□□□ -1.26
ACTN1-216ENST00000556083 LITAFQ99732 161 aa7.19□□□□□ -1.26
ACTN1-216ENST00000556083 WDFY3Q8IZQ1 3526 aa7.18□□□□□ -1.26
ACTN1-216ENST00000556083 PTPRBP23467 1997 aa7.17□□□□□ -1.26
ACTN1-216ENST00000556083 ZNF861PO60384 105 aa7.17□□□□□ -1.26
ACTN1-216ENST00000556083 POLQO75417 2590 aa7.16□□□□□ -1.26
ACTN1-216ENST00000556083 SETD2Q9BYW2 2564 aaPredicted RBP7.16□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 62.3 ms