RNA–Protein interactions for RNA: ENST00000556079.1

TMEM260-209, Transcript of transmembrane protein 260, humanhuman

TSL 2

Gene TMEM260, Length 596 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-209ENST00000556079 ZNF625Q96I27 306 aaPredicted RBP3.85□□□□□ -1.79
TMEM260-209ENST00000556079 PKIGQ9Y2B9 76 aa3.85□□□□□ -1.79
TMEM260-209ENST00000556079 C22orf24Q9Y442 160 aa3.85□□□□□ -1.79
TMEM260-209ENST00000556079 NUPR1O60356 82 aa3.84□□□□□ -1.79
TMEM260-209ENST00000556079 SNAPINO95295 136 aa3.84□□□□□ -1.79
TMEM260-209ENST00000556079 HBDP02042 147 aa3.84□□□□□ -1.79
TMEM260-209ENST00000556079 KRTAP1-4P0C5Y4 121 aa3.84□□□□□ -1.79
TMEM260-209ENST00000556079 SVBPQ8N300 66 aa3.84□□□□□ -1.79
TMEM260-209ENST00000556079 IGLV5-39A0A0G2JS06 123 aa3.83□□□□□ -1.8
TMEM260-209ENST00000556079 H0Y9J4 135 aa3.83□□□□□ -1.8
TMEM260-209ENST00000556079 TRIAP1O43715 76 aa3.83□□□□□ -1.8
TMEM260-209ENST00000556079 PFN2P35080 140 aa3.83□□□□□ -1.8
TMEM260-209ENST00000556079 COX19Q49B96 90 aa3.83□□□□□ -1.8
TMEM260-209ENST00000556079 PAPPA-AS1Q5QFB9 102 aa3.83□□□□□ -1.8
TMEM260-209ENST00000556079 REG3GQ6UW15 175 aa3.83□□□□□ -1.8
TMEM260-209ENST00000556079 BAGE3Q86Y29 109 aa3.83□□□□□ -1.8
TMEM260-209ENST00000556079 ANAPC11Q9NYG5 84 aa3.83□□□□□ -1.8
TMEM260-209ENST00000556079 A0A0U1RRA0 63 aa3.82□□□□□ -1.8
TMEM260-209ENST00000556079 H0Y8G0 127 aa3.82□□□□□ -1.8
TMEM260-209ENST00000556079 TRGC2P03986 189 aa3.82□□□□□ -1.8
TMEM260-209ENST00000556079 SEC11AP67812 179 aa3.82□□□□□ -1.8
TMEM260-209ENST00000556079 NDUFA5Q16718 116 aa3.82□□□□□ -1.8
TMEM260-209ENST00000556079 LINC00167Q96N53 147 aa3.82□□□□□ -1.8
TMEM260-209ENST00000556079 IGKV2-28A0A075B6P5 120 aa3.81□□□□□ -1.8
TMEM260-209ENST00000556079 TMEM238C9JI98 176 aa3.81□□□□□ -1.8
TMEM260-209ENST00000556079 SERF1AO75920 110 aa3.81□□□□□ -1.8
TMEM260-209ENST00000556079 IGKV2D-28P01615 120 aa3.81□□□□□ -1.8
TMEM260-209ENST00000556079 G0S2P27469 103 aa3.81□□□□□ -1.8
TMEM260-209ENST00000556079 TSPEAR-AS2P59090 65 aa3.81□□□□□ -1.8
TMEM260-209ENST00000556079 TMEM170BQ5T4T1 132 aa3.81□□□□□ -1.8
TMEM260-209ENST00000556079 MRPL55Q7Z7F7 128 aaKnown RBP3.81□□□□□ -1.8
TMEM260-209ENST00000556079 PMCHL2Q9BQD1 86 aa3.81□□□□□ -1.8
TMEM260-209ENST00000556079 SND1-IT1Q9HBX3 110 aa3.81□□□□□ -1.8
TMEM260-209ENST00000556079 CHTOPQ9Y3Y2 248 aaKnown RBP3.81□□□□□ -1.8
TMEM260-209ENST00000556079 A0A087X002 238 aa3.8□□□□□ -1.8
TMEM260-209ENST00000556079 H3BRM9 83 aa3.8□□□□□ -1.8
TMEM260-209ENST00000556079 VPREB1P12018 145 aa3.8□□□□□ -1.8
TMEM260-209ENST00000556079 CXCL5P42830 114 aa3.8□□□□□ -1.8
TMEM260-209ENST00000556079 DIRC1Q969H9 104 aa3.8□□□□□ -1.8
TMEM260-209ENST00000556079 IFI27L1Q96BM0 104 aa3.8□□□□□ -1.8
TMEM260-209ENST00000556079 ERG28Q9UKR5 140 aa3.8□□□□□ -1.8
TMEM260-209ENST00000556079 TMEM223A0PJW6 202 aa3.79□□□□□ -1.8
TMEM260-209ENST00000556079 COLCA2A8K830 154 aa3.79□□□□□ -1.8
TMEM260-209ENST00000556079 ATP5LO75964 103 aa3.79□□□□□ -1.8
TMEM260-209ENST00000556079 FABP4P15090 132 aa3.79□□□□□ -1.8
TMEM260-209ENST00000556079 PRLHP81277 87 aa3.79□□□□□ -1.8
TMEM260-209ENST00000556079 IGLV5-37A0A075B6J1 123 aa3.78□□□□□ -1.8
TMEM260-209ENST00000556079 ZNF861PO60384 105 aa3.78□□□□□ -1.8
TMEM260-209ENST00000556079 BCE1O60756 84 aa3.78□□□□□ -1.8
TMEM260-209ENST00000556079 SMIM13P0DJ93 91 aa3.78□□□□□ -1.8
TMEM260-209ENST00000556079 KRTAP13-1Q8IUC0 172 aa3.78□□□□□ -1.8
TMEM260-209ENST00000556079 DAND5Q8N907 189 aa3.78□□□□□ -1.8
TMEM260-209ENST00000556079 CHCHD1Q96BP2 118 aaKnown RBP3.78□□□□□ -1.8
TMEM260-209ENST00000556079 MUC17Q685J3 4493 aa3.77□□□□□ -1.81
TMEM260-209ENST00000556079 TRAV12-1A0A0B4J245 112 aa3.77□□□□□ -1.81
TMEM260-209ENST00000556079 LINC01549A6NIU2 74 aa3.77□□□□□ -1.81
TMEM260-209ENST00000556079 NCR3O14931 201 aa3.77□□□□□ -1.81
TMEM260-209ENST00000556079 HSBP1O75506 76 aa3.77□□□□□ -1.81
TMEM260-209ENST00000556079 TSPAN13O95857 204 aa3.77□□□□□ -1.81
TMEM260-209ENST00000556079 LINC00158P58513 81 aa3.77□□□□□ -1.81
TMEM260-209ENST00000556079 LBHQ53QV2 105 aaPredicted RBP3.77□□□□□ -1.81
TMEM260-209ENST00000556079 NKAPP1Q8N9T2 125 aa3.77□□□□□ -1.81
TMEM260-209ENST00000556079 TP73-AS1Q9UF72 201 aa3.77□□□□□ -1.81
TMEM260-209ENST00000556079 IGLV1-50A0A075B6I6 118 aa3.76□□□□□ -1.81
TMEM260-209ENST00000556079 M0R378 163 aa3.76□□□□□ -1.81
TMEM260-209ENST00000556079 KRTAP13-2Q52LG2 175 aa3.76□□□□□ -1.81
TMEM260-209ENST00000556079 PRYO14603 147 aa3.75□□□□□ -1.81
TMEM260-209ENST00000556079 UBE2AP49459 152 aa3.75□□□□□ -1.81
TMEM260-209ENST00000556079 FAM19A1Q7Z5A9 133 aa3.75□□□□□ -1.81
TMEM260-209ENST00000556079 MIR7-3HGQ8N6C7 128 aa3.75□□□□□ -1.81
TMEM260-209ENST00000556079 TMEM126AQ9H061 195 aa3.75□□□□□ -1.81
TMEM260-209ENST00000556079 LEPROTL1O95214 131 aa3.74□□□□□ -1.81
TMEM260-209ENST00000556079 RPL28P46779 137 aaKnown RBP3.74□□□□□ -1.81
TMEM260-209ENST00000556079 NPC2P61916 151 aa3.74□□□□□ -1.81
TMEM260-209ENST00000556079 MEIG1Q5JSS6 88 aa3.74□□□□□ -1.81
TMEM260-209ENST00000556079 BOD1L2Q8IYS8 172 aa3.74□□□□□ -1.81
TMEM260-209ENST00000556079 C3orf22Q8N5N4 141 aa3.74□□□□□ -1.81
TMEM260-209ENST00000556079 RETNLBQ9BQ08 111 aa3.74□□□□□ -1.81
TMEM260-209ENST00000556079 NDUFA12Q9UI09 145 aa3.74□□□□□ -1.81
TMEM260-209ENST00000556079 HIST1H2BKO60814 126 aa3.73□□□□□ -1.81
TMEM260-209ENST00000556079 HIST1H2BJP06899 126 aa3.73□□□□□ -1.81
TMEM260-209ENST00000556079 HIST1H2BOP23527 126 aa3.73□□□□□ -1.81
TMEM260-209ENST00000556079 HIST1H2BBP33778 126 aa3.73□□□□□ -1.81
TMEM260-209ENST00000556079 HIST1H2BDP58876 126 aa3.73□□□□□ -1.81
TMEM260-209ENST00000556079 HIST1H2BCP62807 126 aa3.73□□□□□ -1.81
TMEM260-209ENST00000556079 HIST2H2BEQ16778 126 aa3.73□□□□□ -1.81
TMEM260-209ENST00000556079 HIST2H2BFQ5QNW6 126 aaPredicted RBP3.73□□□□□ -1.81
TMEM260-209ENST00000556079 KRTAP5-3Q6L8H2 238 aa3.73□□□□□ -1.81
TMEM260-209ENST00000556079 SOSTDC1Q6X4U4 206 aa3.73□□□□□ -1.81
TMEM260-209ENST00000556079 HIST1H2BHQ93079 126 aa3.73□□□□□ -1.81
TMEM260-209ENST00000556079 HIST1H2BNQ99877 126 aa3.73□□□□□ -1.81
TMEM260-209ENST00000556079 HIST1H2BMQ99879 126 aa3.73□□□□□ -1.81
TMEM260-209ENST00000556079 TTTY13Q9BZ97 58 aa3.73□□□□□ -1.81
TMEM260-209ENST00000556079 TRBV10-3A0A0K0K1G6 114 aa3.72□□□□□ -1.81
TMEM260-209ENST00000556079 KRTAP23-1A1A580 65 aa3.72□□□□□ -1.81
TMEM260-209ENST00000556079 LEPROTO15243 131 aa3.72□□□□□ -1.81
TMEM260-209ENST00000556079 DPM2O94777 84 aa3.72□□□□□ -1.81
TMEM260-209ENST00000556079 COX17Q14061 63 aa3.72□□□□□ -1.81
TMEM260-209ENST00000556079 PRR4Q16378 134 aa3.72□□□□□ -1.81
TMEM260-209ENST00000556079 ADAMTSL4-AS1Q5T5F5 129 aa3.72□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms