RNA–Protein interactions for RNA: ENST00000555906.5

PRKCH-219, Transcript of protein kinase C eta, humanhuman

TSL 3

Gene PRKCH, Length 459 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-219ENST00000555906 ZNF625Q96I27 306 aaPredicted RBP11.46□□□□□ -0.57
PRKCH-219ENST00000555906 TMEM170BQ5T4T1 132 aa11.45□□□□□ -0.58
PRKCH-219ENST00000555906 BAGE3Q86Y29 109 aa11.44□□□□□ -0.58
PRKCH-219ENST00000555906 RETNLBQ9BQ08 111 aa11.44□□□□□ -0.58
PRKCH-219ENST00000555906 MUC17Q685J3 4493 aa11.44□□□□□ -0.58
PRKCH-219ENST00000555906 TPRXLQ17RH7 258 aa11.41□□□□□ -0.58
PRKCH-219ENST00000555906 CBLN2Q8IUK8 224 aa11.41□□□□□ -0.58
PRKCH-219ENST00000555906 PLEKHB2Q96CS7 222 aa11.41□□□□□ -0.58
PRKCH-219ENST00000555906 CHTOPQ9Y3Y2 248 aaKnown RBP11.4□□□□□ -0.58
PRKCH-219ENST00000555906 LINC00158P58513 81 aa11.38□□□□□ -0.59
PRKCH-219ENST00000555906 HIGD2AQ9BW72 106 aa11.38□□□□□ -0.59
PRKCH-219ENST00000555906 FAT4Q6V0I7 4981 aa11.37□□□□□ -0.59
PRKCH-219ENST00000555906 TMEM223A0PJW6 202 aa11.37□□□□□ -0.59
PRKCH-219ENST00000555906 C3orf22Q8N5N4 141 aa11.37□□□□□ -0.59
PRKCH-219ENST00000555906 TRAV12-1A0A0B4J245 112 aa11.36□□□□□ -0.59
PRKCH-219ENST00000555906 IGLV7-46A0A075B6I9 117 aa11.35□□□□□ -0.59
PRKCH-219ENST00000555906 SPRR4Q96PI1 79 aa11.35□□□□□ -0.59
PRKCH-219ENST00000555906 CDIP1Q9H305 208 aa11.35□□□□□ -0.59
PRKCH-219ENST00000555906 PRYO14603 147 aa11.34□□□□□ -0.59
PRKCH-219ENST00000555906 CHCHD1Q96BP2 118 aaKnown RBP11.34□□□□□ -0.59
PRKCH-219ENST00000555906 ZNF706Q9Y5V0 76 aaPredicted RBP11.34□□□□□ -0.59
PRKCH-219ENST00000555906 A0A0U1RRA0 63 aa11.33□□□□□ -0.6
PRKCH-219ENST00000555906 SNAPINO95295 136 aa11.33□□□□□ -0.6
PRKCH-219ENST00000555906 APOC3P02656 99 aa11.33□□□□□ -0.6
PRKCH-219ENST00000555906 SPAG11AQ6PDA7 123 aa11.33□□□□□ -0.6
PRKCH-219ENST00000555906 IFI27L1Q96BM0 104 aa11.33□□□□□ -0.6
PRKCH-219ENST00000555906 SVBPQ8N300 66 aa11.32□□□□□ -0.6
PRKCH-219ENST00000555906 SMIM13P0DJ93 91 aa11.31□□□□□ -0.6
PRKCH-219ENST00000555906 NDUFA5Q16718 116 aa11.31□□□□□ -0.6
PRKCH-219ENST00000555906 MEIG1Q5JSS6 88 aa11.31□□□□□ -0.6
PRKCH-219ENST00000555906 SPRR1AP35321 89 aa11.3□□□□□ -0.6
PRKCH-219ENST00000555906 HERV-K104P63124 156 aa11.3□□□□□ -0.6
PRKCH-219ENST00000555906 LCE2AQ5TA79 106 aaPredicted RBP11.3□□□□□ -0.6
PRKCH-219ENST00000555906 BOD1L2Q8IYS8 172 aa11.3□□□□□ -0.6
PRKCH-219ENST00000555906 LINC00337Q8N6G1 96 aa11.3□□□□□ -0.6
PRKCH-219ENST00000555906 ATP6V1G1O75348 118 aa11.29□□□□□ -0.6
PRKCH-219ENST00000555906 MIR7-3HGQ8N6C7 128 aa11.29□□□□□ -0.6
PRKCH-219ENST00000555906 YPEL4Q96NS1 127 aa11.29□□□□□ -0.6
PRKCH-219ENST00000555906 NCR3O14931 201 aa11.28□□□□□ -0.6
PRKCH-219ENST00000555906 PPDPFQ9H3Y8 114 aa11.28□□□□□ -0.6
PRKCH-219ENST00000555906 KCNQ1DNQ9H478 68 aa11.28□□□□□ -0.6
PRKCH-219ENST00000555906 LINC00587B1AMM8 73 aa11.27□□□□□ -0.61
PRKCH-219ENST00000555906 FP248Q71RG6 208 aaPredicted RBP11.27□□□□□ -0.61
PRKCH-219ENST00000555906 KRTAP4-16G5E9R7 235 aaPredicted RBP11.26□□□□□ -0.61
PRKCH-219ENST00000555906 NDUFA12Q9UI09 145 aa11.25□□□□□ -0.61
PRKCH-219ENST00000555906 ETDCA0A1B0GVM5 59 aa11.24□□□□□ -0.61
PRKCH-219ENST00000555906 C4orf48Q5BLP8 95 aa11.24□□□□□ -0.61
PRKCH-219ENST00000555906 TRBV10-3A0A0K0K1G6 114 aa11.23□□□□□ -0.61
PRKCH-219ENST00000555906 MYMXA0A1B0GTQ4 84 aa11.23□□□□□ -0.61
PRKCH-219ENST00000555906 HSBP1O75506 76 aa11.23□□□□□ -0.61
PRKCH-219ENST00000555906 Q8NBF4 154 aa11.23□□□□□ -0.61
PRKCH-219ENST00000555906 MAP1LC3CQ9BXW4 147 aa11.23□□□□□ -0.61
PRKCH-219ENST00000555906 LINC00483Q53H64 154 aa11.22□□□□□ -0.61
PRKCH-219ENST00000555906 SMCR5Q8TEV8 140 aa11.22□□□□□ -0.61
PRKCH-219ENST00000555906 S100A12P80511 92 aa11.21□□□□□ -0.61
PRKCH-219ENST00000555906 KRTAP9-2Q9BYQ4 174 aa11.21□□□□□ -0.61
PRKCH-219ENST00000555906 FAM19A2Q8N3H0 131 aa11.2□□□□□ -0.62
PRKCH-219ENST00000555906 DAND5Q8N907 189 aa11.2□□□□□ -0.62
PRKCH-219ENST00000555906 TSPEAR-AS2P59090 65 aa11.19□□□□□ -0.62
PRKCH-219ENST00000555906 LOC107984156A0A0G2JMH3 177 aa11.18□□□□□ -0.62
PRKCH-219ENST00000555906 SPINK1P00995 79 aa11.18□□□□□ -0.62
PRKCH-219ENST00000555906 ARL17AQ8IVW1 177 aa11.18□□□□□ -0.62
PRKCH-219ENST00000555906 TRBV10-2A0A0K0K1G8 114 aa11.17□□□□□ -0.62
PRKCH-219ENST00000555906 B5MCH6 92 aa11.17□□□□□ -0.62
PRKCH-219ENST00000555906 H0Y8G0 127 aa11.17□□□□□ -0.62
PRKCH-219ENST00000555906 LEPROTO15243 131 aa11.16□□□□□ -0.62
PRKCH-219ENST00000555906 PLNP26678 52 aa11.16□□□□□ -0.62
PRKCH-219ENST00000555906 KRTAP13-3Q3SY46 172 aa11.16□□□□□ -0.62
PRKCH-219ENST00000555906 LEPROTL1O95214 131 aa11.15□□□□□ -0.62
PRKCH-219ENST00000555906 DDTP30046 118 aa11.15□□□□□ -0.62
PRKCH-219ENST00000555906 GAGE2AQ6NT46 116 aa11.14□□□□□ -0.63
PRKCH-219ENST00000555906 SPANXB1Q9NS25 103 aaPredicted RBP11.14□□□□□ -0.63
PRKCH-219ENST00000555906 NMUP48645 174 aa11.13□□□□□ -0.63
PRKCH-219ENST00000555906 LINC00310P59036 64 aa11.13□□□□□ -0.63
PRKCH-219ENST00000555906 RPS29P62273 56 aaKnown RBP11.13□□□□□ -0.63
PRKCH-219ENST00000555906 MOBPQ13875 183 aa11.13□□□□□ -0.63
PRKCH-219ENST00000555906 J3QQQ9 107 aa11.12□□□□□ -0.63
PRKCH-219ENST00000555906 SERF1AO75920 110 aa11.12□□□□□ -0.63
PRKCH-219ENST00000555906 HERVK_113P61574 105 aa11.12□□□□□ -0.63
PRKCH-219ENST00000555906 Q6ZRX8 168 aa11.12□□□□□ -0.63
PRKCH-219ENST00000555906 Q9BRP9 147 aa11.12□□□□□ -0.63
PRKCH-219ENST00000555906 MIEN1Q9BRT3 115 aa11.12□□□□□ -0.63
PRKCH-219ENST00000555906 ERC2-IT1O76042 136 aa11.11□□□□□ -0.63
PRKCH-219ENST00000555906 TRGC2P03986 189 aa11.11□□□□□ -0.63
PRKCH-219ENST00000555906 IGLV9-49A0A0B4J1Y8 123 aa11.1□□□□□ -0.63
PRKCH-219ENST00000555906 DPM2O94777 84 aa11.1□□□□□ -0.63
PRKCH-219ENST00000555906 NDUFC2O95298 119 aa11.1□□□□□ -0.63
PRKCH-219ENST00000555906 ASB16-AS1Q495Z4 193 aa11.1□□□□□ -0.63
PRKCH-219ENST00000555906 HSPB8Q9UJY1 196 aa11.1□□□□□ -0.63
PRKCH-219ENST00000555906 LGALS3P17931 250 aaKnown RBP11.09□□□□□ -0.63
PRKCH-219ENST00000555906 SSBP3-AS1Q7Z2R9 100 aa11.09□□□□□ -0.63
PRKCH-219ENST00000555906 IGLV6-57P01721 117 aa11.08□□□□□ -0.64
PRKCH-219ENST00000555906 IGKCP01834 107 aa11.07□□□□□ -0.64
PRKCH-219ENST00000555906 S100A7L2Q5SY68 101 aa11.07□□□□□ -0.64
PRKCH-219ENST00000555906 Q8N377 158 aa11.07□□□□□ -0.64
PRKCH-219ENST00000555906 TRAV23DV6A0A075B6W5 121 aa11.06□□□□□ -0.64
PRKCH-219ENST00000555906 JOSD1Q15040 202 aaPredicted RBP11.05□□□□□ -0.64
PRKCH-219ENST00000555906 PMCHL2Q9BQD1 86 aa11.05□□□□□ -0.64
PRKCH-219ENST00000555906 SLC25A20O43772 301 aa11.03□□□□□ -0.64
PRKCH-219ENST00000555906 FABP4P15090 132 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 81.8 ms