RNA–Protein interactions for RNA: ENST00000555854.1

VIPAS39-207, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 5

Gene VIPAS39, Length 444 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-207ENST00000555854 F8WDY8 70 aa5.68□□□□□ -1.5
VIPAS39-207ENST00000555854 LINC00469Q8N7U9 141 aa5.68□□□□□ -1.5
VIPAS39-207ENST00000555854 URB1-AS1Q96HZ7 61 aa5.68□□□□□ -1.5
VIPAS39-207ENST00000555854 SNHG12Q9BXW3 62 aa5.68□□□□□ -1.5
VIPAS39-207ENST00000555854 CYSLTR1Q9Y271 337 aa5.68□□□□□ -1.5
VIPAS39-207ENST00000555854 HBDP02042 147 aa5.67□□□□□ -1.5
VIPAS39-207ENST00000555854 C9orf129Q5T035 196 aaKnown RBP5.67□□□□□ -1.5
VIPAS39-207ENST00000555854 FAM19A5Q7Z5A7 132 aaPredicted RBP5.67□□□□□ -1.5
VIPAS39-207ENST00000555854 FAM19A3Q7Z5A8 133 aa5.67□□□□□ -1.5
VIPAS39-207ENST00000555854 ATP5LO75964 103 aa5.66□□□□□ -1.5
VIPAS39-207ENST00000555854 C1orf137Q5JT78 98 aa5.66□□□□□ -1.5
VIPAS39-207ENST00000555854 SLC25A34Q6PIV7 304 aa5.66□□□□□ -1.5
VIPAS39-207ENST00000555854 REG3GQ6UW15 175 aa5.66□□□□□ -1.5
VIPAS39-207ENST00000555854 Q6ZN92 141 aa5.66□□□□□ -1.5
VIPAS39-207ENST00000555854 TRBV30A0A0K0K1B3 111 aa5.65□□□□□ -1.5
VIPAS39-207ENST00000555854 DLEU1O43261 78 aa5.65□□□□□ -1.5
VIPAS39-207ENST00000555854 GAGE2EQ4V326 116 aa5.65□□□□□ -1.5
VIPAS39-207ENST00000555854 ORMDL2Q53FV1 153 aa5.65□□□□□ -1.5
VIPAS39-207ENST00000555854 LINC01561Q8N1V8 128 aa5.65□□□□□ -1.5
VIPAS39-207ENST00000555854 GAGE2DQ9UEU5 116 aa5.65□□□□□ -1.5
VIPAS39-207ENST00000555854 A0A1B0GV90 55 aa5.64□□□□□ -1.51
VIPAS39-207ENST00000555854 NDUFC2-KCTD14E9PQ53 114 aa5.64□□□□□ -1.51
VIPAS39-207ENST00000555854 IGLV7-43P04211 117 aa5.64□□□□□ -1.51
VIPAS39-207ENST00000555854 NPSP0C0P6 89 aa5.64□□□□□ -1.51
VIPAS39-207ENST00000555854 TOMM6Q96B49 74 aa5.64□□□□□ -1.51
VIPAS39-207ENST00000555854 IFI27L1Q96BM0 104 aa5.64□□□□□ -1.51
VIPAS39-207ENST00000555854 TIMM17AQ99595 171 aa5.64□□□□□ -1.51
VIPAS39-207ENST00000555854 CDKN2A-AS1Q9UH64 79 aa5.64□□□□□ -1.51
VIPAS39-207ENST00000555854 M0QXV9 152 aa5.63□□□□□ -1.51
VIPAS39-207ENST00000555854 KRTAP1-4P0C5Y4 121 aa5.63□□□□□ -1.51
VIPAS39-207ENST00000555854 COX8AP10176 69 aa5.63□□□□□ -1.51
VIPAS39-207ENST00000555854 Q8IZM0 81 aa5.63□□□□□ -1.51
VIPAS39-207ENST00000555854 VCX2Q9H322 139 aa5.63□□□□□ -1.51
VIPAS39-207ENST00000555854 SMIM1B2RUZ4 78 aa5.62□□□□□ -1.51
VIPAS39-207ENST00000555854 H0Y9J4 135 aa5.62□□□□□ -1.51
VIPAS39-207ENST00000555854 TOMM7Q9P0U1 55 aa5.62□□□□□ -1.51
VIPAS39-207ENST00000555854 MUC2Q02817 5179 aa5.61□□□□□ -1.51
VIPAS39-207ENST00000555854 IGLV5-45A0A087WSX0 123 aa5.61□□□□□ -1.51
VIPAS39-207ENST00000555854 SEC11AP67812 179 aa5.61□□□□□ -1.51
VIPAS39-207ENST00000555854 BOD1L2Q8IYS8 172 aa5.61□□□□□ -1.51
VIPAS39-207ENST00000555854 PRR26Q8N8Z3 221 aa5.61□□□□□ -1.51
VIPAS39-207ENST00000555854 KRTAP4-2Q9BYR5 136 aa5.61□□□□□ -1.51
VIPAS39-207ENST00000555854 A0A096LNJ9 63 aa5.6□□□□□ -1.51
VIPAS39-207ENST00000555854 TRAV12-1A0A0B4J245 112 aa5.6□□□□□ -1.51
VIPAS39-207ENST00000555854 EIF4EBP3O60516 100 aaPredicted RBP5.6□□□□□ -1.51
VIPAS39-207ENST00000555854 HERVK_113P63121 156 aa5.6□□□□□ -1.51
VIPAS39-207ENST00000555854 PAPPA-AS1Q5QFB9 102 aa5.6□□□□□ -1.51
VIPAS39-207ENST00000555854 XAGE1AQ9HD64 81 aa5.6□□□□□ -1.51
VIPAS39-207ENST00000555854 UBE2BP63146 152 aa5.59□□□□□ -1.51
VIPAS39-207ENST00000555854 ERASQ7Z444 233 aa5.59□□□□□ -1.51
VIPAS39-207ENST00000555854 ATOH7Q8N100 152 aa5.59□□□□□ -1.51
VIPAS39-207ENST00000555854 DIRC1Q969H9 104 aa5.59□□□□□ -1.51
VIPAS39-207ENST00000555854 HIGD1BQ9P298 99 aa5.59□□□□□ -1.51
VIPAS39-207ENST00000555854 A6NDN8 102 aa5.58□□□□□ -1.52
VIPAS39-207ENST00000555854 F8VRH5 84 aa5.58□□□□□ -1.52
VIPAS39-207ENST00000555854 DPM2O94777 84 aa5.58□□□□□ -1.52
VIPAS39-207ENST00000555854 PRSS2P07478 247 aa5.58□□□□□ -1.52
VIPAS39-207ENST00000555854 PLNP26678 52 aa5.58□□□□□ -1.52
VIPAS39-207ENST00000555854 CKS1BP61024 79 aa5.58□□□□□ -1.52
VIPAS39-207ENST00000555854 SCGB3A1Q96QR1 104 aa5.58□□□□□ -1.52
VIPAS39-207ENST00000555854 C22orf24Q9Y442 160 aa5.58□□□□□ -1.52
VIPAS39-207ENST00000555854 MUC17Q685J3 4493 aa5.57□□□□□ -1.52
VIPAS39-207ENST00000555854 TINCRA0A1B0GVN0 87 aa5.57□□□□□ -1.52
VIPAS39-207ENST00000555854 IGKCP01834 107 aa5.57□□□□□ -1.52
VIPAS39-207ENST00000555854 TAL2Q16559 108 aa5.57□□□□□ -1.52
VIPAS39-207ENST00000555854 C6orf226Q5I0X4 101 aa5.57□□□□□ -1.52
VIPAS39-207ENST00000555854 CST9LQ9H4G1 147 aa5.57□□□□□ -1.52
VIPAS39-207ENST00000555854 GEMIN7Q9H840 131 aaKnown RBP5.57□□□□□ -1.52
VIPAS39-207ENST00000555854 SPINK8P0C7L1 97 aa5.56□□□□□ -1.52
VIPAS39-207ENST00000555854 CXCL5P42830 114 aa5.56□□□□□ -1.52
VIPAS39-207ENST00000555854 HSD52Q0P140 79 aa5.56□□□□□ -1.52
VIPAS39-207ENST00000555854 BATFQ16520 125 aa5.56□□□□□ -1.52
VIPAS39-207ENST00000555854 COX7B2Q8TF08 81 aa5.56□□□□□ -1.52
VIPAS39-207ENST00000555854 HINT1P49773 126 aaPredicted RBP5.55□□□□□ -1.52
VIPAS39-207ENST00000555854 UBE2V1Q13404 147 aa5.55□□□□□ -1.52
VIPAS39-207ENST00000555854 BVES-AS1Q5T3Y7 98 aa5.55□□□□□ -1.52
VIPAS39-207ENST00000555854 TP73-AS1Q9UF72 201 aa5.55□□□□□ -1.52
VIPAS39-207ENST00000555854 IGLV1-50A0A075B6I6 118 aa5.54□□□□□ -1.52
VIPAS39-207ENST00000555854 IGLV5-39A0A0G2JS06 123 aa5.54□□□□□ -1.52
VIPAS39-207ENST00000555854 H0Y8G0 127 aa5.54□□□□□ -1.52
VIPAS39-207ENST00000555854 ZNF861PO60384 105 aa5.54□□□□□ -1.52
VIPAS39-207ENST00000555854 ZNF22P17026 224 aaPredicted RBP5.54□□□□□ -1.52
VIPAS39-207ENST00000555854 PMVKQ15126 192 aa5.54□□□□□ -1.52
VIPAS39-207ENST00000555854 MRPL55Q7Z7F7 128 aaKnown RBP5.54□□□□□ -1.52
VIPAS39-207ENST00000555854 FAT4Q6V0I7 4981 aa5.53□□□□□ -1.52
VIPAS39-207ENST00000555854 IGLV5-37A0A075B6J1 123 aa5.53□□□□□ -1.52
VIPAS39-207ENST00000555854 H3BRM9 83 aa5.53□□□□□ -1.52
VIPAS39-207ENST00000555854 KRTAP13-1Q8IUC0 172 aa5.53□□□□□ -1.52
VIPAS39-207ENST00000555854 Q8NDZ9 215 aa5.53□□□□□ -1.52
VIPAS39-207ENST00000555854 A0A087X002 238 aa5.52□□□□□ -1.53
VIPAS39-207ENST00000555854 KRTAP9-7A8MTY7 169 aa5.52□□□□□ -1.53
VIPAS39-207ENST00000555854 ANKRD39Q53RE8 183 aa5.52□□□□□ -1.53
VIPAS39-207ENST00000555854 LINC00167Q96N53 147 aa5.52□□□□□ -1.53
VIPAS39-207ENST00000555854 CHTOPQ9Y3Y2 248 aaKnown RBP5.52□□□□□ -1.53
VIPAS39-207ENST00000555854 GAGE10A6NGK3 116 aa5.51□□□□□ -1.53
VIPAS39-207ENST00000555854 C11orf86A6NJI1 115 aa5.51□□□□□ -1.53
VIPAS39-207ENST00000555854 RPL37AP8A6NKH3 93 aa5.51□□□□□ -1.53
VIPAS39-207ENST00000555854 BCE1O60756 84 aa5.51□□□□□ -1.53
VIPAS39-207ENST00000555854 HERVK_113P61574 105 aa5.51□□□□□ -1.53
VIPAS39-207ENST00000555854 C2orf91Q6ZV80 131 aa5.51□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms