RNA–Protein interactions for RNA: ENST00000555746.5

SRP54-209, Transcript of signal recognition particle 54, humanhuman

TSL 4

Gene SRP54, Length 558 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-209ENST00000555746 TRAPPC1Q9Y5R8 145 aa1.88□□□□□ -2.11
SRP54-209ENST00000555746 MYCBP2O75592 4640 aa1.88□□□□□ -2.11
SRP54-209ENST00000555746 PLECQ15149 4684 aaKnown RBP1.87□□□□□ -2.11
SRP54-209ENST00000555746 A8MWP4 228 aa1.87□□□□□ -2.11
SRP54-209ENST00000555746 GNRH2O43555 120 aa1.87□□□□□ -2.11
SRP54-209ENST00000555746 LY6HO94772 140 aa1.87□□□□□ -2.11
SRP54-209ENST00000555746 CPSF4O95639 269 aaKnown RBP1.87□□□□□ -2.11
SRP54-209ENST00000555746 EFNA4P52798 201 aa1.87□□□□□ -2.11
SRP54-209ENST00000555746 ZNF117Q03924 483 aa1.87□□□□□ -2.11
SRP54-209ENST00000555746 ZNF56Q15929 161 aa1.87□□□□□ -2.11
SRP54-209ENST00000555746 C2orf91Q6ZV80 131 aa1.87□□□□□ -2.11
SRP54-209ENST00000555746 WFDC9Q8NEX5 89 aa1.87□□□□□ -2.11
SRP54-209ENST00000555746 CYP4F30PQ9H0H9 118 aa1.87□□□□□ -2.11
SRP54-209ENST00000555746 LINC00474Q9P2X8 69 aa1.87□□□□□ -2.11
SRP54-209ENST00000555746 NDUFA12Q9UI09 145 aa1.87□□□□□ -2.11
SRP54-209ENST00000555746 ARL2-SNX15V9GYD0 113 aa1.87□□□□□ -2.11
SRP54-209ENST00000555746 DYNC1H1Q14204 4646 aaKnown RBP1.86□□□□□ -2.11
SRP54-209ENST00000555746 TRBV10-3A0A0K0K1G6 114 aa1.86□□□□□ -2.11
SRP54-209ENST00000555746 FXYD1O00168 92 aa1.86□□□□□ -2.11
SRP54-209ENST00000555746 LECT2O14960 151 aa1.86□□□□□ -2.11
SRP54-209ENST00000555746 IGKV1D-33P01593 117 aa1.86□□□□□ -2.11
SRP54-209ENST00000555746 IGKV1-33P01594 117 aa1.86□□□□□ -2.11
SRP54-209ENST00000555746 IGHV1-46P01743 117 aa1.86□□□□□ -2.11
SRP54-209ENST00000555746 TRGV3P03979 118 aa1.86□□□□□ -2.11
SRP54-209ENST00000555746 GCHFRP30047 84 aa1.86□□□□□ -2.11
SRP54-209ENST00000555746 RPL28P46779 137 aaKnown RBP1.86□□□□□ -2.11
SRP54-209ENST00000555746 KLKP1Q107X0 134 aa1.86□□□□□ -2.11
SRP54-209ENST00000555746 SDIM1Q6ZPB5 146 aa1.86□□□□□ -2.11
SRP54-209ENST00000555746 TOMM5Q8N4H5 51 aa1.86□□□□□ -2.11
SRP54-209ENST00000555746 Q8N814 137 aa1.86□□□□□ -2.11
SRP54-209ENST00000555746 TIMM21Q9BVV7 248 aa1.86□□□□□ -2.11
SRP54-209ENST00000555746 TTTY12Q9BZ98 90 aa1.86□□□□□ -2.11
SRP54-209ENST00000555746 CYSTM1Q9H1C7 97 aa1.86□□□□□ -2.11
SRP54-209ENST00000555746 DNAH11Q96DT5 4516 aa1.86□□□□□ -2.11
SRP54-209ENST00000555746 IGLV3-12A0A075B6K2 115 aa1.85□□□□□ -2.11
SRP54-209ENST00000555746 IGKV2D-26A0A0A0MRZ7 120 aa1.85□□□□□ -2.11
SRP54-209ENST00000555746 IGHV3-73A0A0B4J1V6 119 aa1.85□□□□□ -2.11
SRP54-209ENST00000555746 IGHV1-3A0A0C4DH29 117 aa1.85□□□□□ -2.11
SRP54-209ENST00000555746 C19orf71A6NCJ1 209 aa1.85□□□□□ -2.11
SRP54-209ENST00000555746 H3BMM0 161 aa1.85□□□□□ -2.11
SRP54-209ENST00000555746 H7BZZ5 65 aa1.85□□□□□ -2.11
SRP54-209ENST00000555746 IGLV1-51P01701 117 aa1.85□□□□□ -2.11
SRP54-209ENST00000555746 IL4P05112 153 aa1.85□□□□□ -2.11
SRP54-209ENST00000555746 XCL1P47992 114 aa1.85□□□□□ -2.11
SRP54-209ENST00000555746 DSCR4P56555 118 aaPredicted RBP1.85□□□□□ -2.11
SRP54-209ENST00000555746 NNATQ16517 81 aa1.85□□□□□ -2.11
SRP54-209ENST00000555746 LY6EQ16553 131 aa1.85□□□□□ -2.11
SRP54-209ENST00000555746 IGFL1Q6UW32 110 aa1.85□□□□□ -2.11
SRP54-209ENST00000555746 LYPD5Q6UWN5 251 aa1.85□□□□□ -2.11
SRP54-209ENST00000555746 CASC2Q6XLA1 102 aa1.85□□□□□ -2.11
SRP54-209ENST00000555746 KRTAP5-5Q701N2 237 aaPredicted RBP1.85□□□□□ -2.11
SRP54-209ENST00000555746 ADM2Q7Z4H4 148 aa1.85□□□□□ -2.11
SRP54-209ENST00000555746 VMO1Q7Z5L0 202 aa1.85□□□□□ -2.11
SRP54-209ENST00000555746 DYNAPQ8N1N2 210 aa1.85□□□□□ -2.11
SRP54-209ENST00000555746 SPTSSBQ8NFR3 76 aa1.85□□□□□ -2.11
SRP54-209ENST00000555746 UBE2WQ96B02 151 aa1.85□□□□□ -2.11
SRP54-209ENST00000555746 RNF5Q99942 180 aa1.85□□□□□ -2.11
SRP54-209ENST00000555746 FAM103A1Q9BTL3 118 aaKnown RBP1.85□□□□□ -2.11
SRP54-209ENST00000555746 BPESC1Q9GZL8 116 aa1.85□□□□□ -2.11
SRP54-209ENST00000555746 GNG13Q9P2W3 67 aa1.85□□□□□ -2.11
SRP54-209ENST00000555746 PRO1854Q9UHT4 67 aa1.85□□□□□ -2.11
SRP54-209ENST00000555746 HILPDAQ9Y5L2 63 aa1.85□□□□□ -2.11
SRP54-209ENST00000555746 TRBV6-7A0A0A0MS04 114 aa1.84□□□□□ -2.11
SRP54-209ENST00000555746 TRBV7-1A0A0A6YYK4 115 aa1.84□□□□□ -2.11
SRP54-209ENST00000555746 TRAV40A0A0B4J280 105 aa1.84□□□□□ -2.11
SRP54-209ENST00000555746 TRBV10-2A0A0K0K1G8 114 aa1.84□□□□□ -2.11
SRP54-209ENST00000555746 A0A1B0GWA3 101 aa1.84□□□□□ -2.11
SRP54-209ENST00000555746 CRPP02741 224 aa1.84□□□□□ -2.11
SRP54-209ENST00000555746 HMGN2P05204 90 aaKnown RBP1.84□□□□□ -2.11
SRP54-209ENST00000555746 CD24P25063 80 aa1.84□□□□□ -2.11
SRP54-209ENST00000555746 FXYD2P54710 66 aa1.84□□□□□ -2.11
SRP54-209ENST00000555746 KRTAP10-10P60014 251 aa1.84□□□□□ -2.11
SRP54-209ENST00000555746 C9orf116Q5BN46 136 aaPredicted RBP1.84□□□□□ -2.11
SRP54-209ENST00000555746 LELP1Q5T871 98 aa1.84□□□□□ -2.11
SRP54-209ENST00000555746 ZNF826PQ6ZT77 177 aa1.84□□□□□ -2.11
SRP54-209ENST00000555746 Q8IYB0 196 aa1.84□□□□□ -2.11
SRP54-209ENST00000555746 FAM19A2Q8N3H0 131 aa1.84□□□□□ -2.11
SRP54-209ENST00000555746 TIMM9Q9Y5J7 89 aa1.84□□□□□ -2.11
SRP54-209ENST00000555746 ICOSQ9Y6W8 199 aa1.84□□□□□ -2.11
SRP54-209ENST00000555746 IGLV2-18A0A075B6J9 118 aa1.83□□□□□ -2.12
SRP54-209ENST00000555746 TRAV7A0A075B6U4 112 aa1.83□□□□□ -2.12
SRP54-209ENST00000555746 A0A0B4J2C4 111 aa1.83□□□□□ -2.12
SRP54-209ENST00000555746 C16orf90A8MZG2 172 aa1.83□□□□□ -2.12
SRP54-209ENST00000555746 HCG22E2RYF7 251 aa1.83□□□□□ -2.12
SRP54-209ENST00000555746 ROMO1P60602 79 aa1.83□□□□□ -2.12
SRP54-209ENST00000555746 KRTAP13-2Q52LG2 175 aa1.83□□□□□ -2.12
SRP54-209ENST00000555746 C1orf134Q5TEV5 83 aa1.83□□□□□ -2.12
SRP54-209ENST00000555746 LYZL2Q7Z4W2 148 aa1.83□□□□□ -2.12
SRP54-209ENST00000555746 FAM223AQ8IWN6 122 aa1.83□□□□□ -2.12
SRP54-209ENST00000555746 Q8N6K4 173 aa1.83□□□□□ -2.12
SRP54-209ENST00000555746 Q8NDZ9 215 aa1.83□□□□□ -2.12
SRP54-209ENST00000555746 IFI27L1Q96BM0 104 aa1.83□□□□□ -2.12
SRP54-209ENST00000555746 FAM167A-AS1Q96KT0 104 aa1.83□□□□□ -2.12
SRP54-209ENST00000555746 LINC00574Q9H8X3 128 aa1.83□□□□□ -2.12
SRP54-209ENST00000555746 C14orf132Q9NPU4 83 aa1.83□□□□□ -2.12
SRP54-209ENST00000555746 CDC42SE1Q9NRR8 79 aa1.83□□□□□ -2.12
SRP54-209ENST00000555746 DNAH6Q9C0G6 4158 aa1.83□□□□□ -2.12
SRP54-209ENST00000555746 VPS13DQ5THJ4 4388 aa1.82□□□□□ -2.12
SRP54-209ENST00000555746 APOBP04114 4563 aaKnown RBP1.82□□□□□ -2.12
SRP54-209ENST00000555746 TRBV7-3A0A075B6L6 115 aa1.82□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 69 ms