RNA–Protein interactions for RNA: ENST00000555314.1

TMEM253-205, Transcript of transmembrane protein 253, humanhuman

TSL 3

Gene TMEM253, Length 605 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM253-205ENST00000555314 SCGB3A1Q96QR1 104 aa7.25□□□□□ -1.25
TMEM253-205ENST00000555314 BAGE3Q86Y29 109 aa7.24□□□□□ -1.25
TMEM253-205ENST00000555314 CHCHD1Q96BP2 118 aaKnown RBP7.24□□□□□ -1.25
TMEM253-205ENST00000555314 LINC01549A6NIU2 74 aa7.23□□□□□ -1.25
TMEM253-205ENST00000555314 HBDP02042 147 aa7.23□□□□□ -1.25
TMEM253-205ENST00000555314 PDZD11Q5EBL8 140 aa7.23□□□□□ -1.25
TMEM253-205ENST00000555314 RETNLBQ9BQ08 111 aa7.23□□□□□ -1.25
TMEM253-205ENST00000555314 CDKN2A-AS1Q9UH64 79 aa7.23□□□□□ -1.25
TMEM253-205ENST00000555314 IGKV2D-26A0A0A0MRZ7 120 aa7.22□□□□□ -1.25
TMEM253-205ENST00000555314 RPL37AP8A6NKH3 93 aa7.22□□□□□ -1.25
TMEM253-205ENST00000555314 SERF1AO75920 110 aa7.22□□□□□ -1.25
TMEM253-205ENST00000555314 GEMIN7Q9H840 131 aaKnown RBP7.22□□□□□ -1.25
TMEM253-205ENST00000555314 ANAPC11Q9NYG5 84 aa7.22□□□□□ -1.25
TMEM253-205ENST00000555314 HIST1H2BKO60814 126 aa7.21□□□□□ -1.26
TMEM253-205ENST00000555314 HIST1H2BJP06899 126 aa7.21□□□□□ -1.26
TMEM253-205ENST00000555314 HIST1H2BOP23527 126 aa7.21□□□□□ -1.26
TMEM253-205ENST00000555314 HIST1H2BBP33778 126 aa7.21□□□□□ -1.26
TMEM253-205ENST00000555314 UBE2AP49459 152 aa7.21□□□□□ -1.26
TMEM253-205ENST00000555314 HIST1H2BDP58876 126 aa7.21□□□□□ -1.26
TMEM253-205ENST00000555314 HIST1H2BCP62807 126 aa7.21□□□□□ -1.26
TMEM253-205ENST00000555314 HIST2H2BEQ16778 126 aa7.21□□□□□ -1.26
TMEM253-205ENST00000555314 HIST2H2BFQ5QNW6 126 aaPredicted RBP7.21□□□□□ -1.26
TMEM253-205ENST00000555314 HIST1H2BHQ93079 126 aa7.21□□□□□ -1.26
TMEM253-205ENST00000555314 HIST1H2BNQ99877 126 aa7.21□□□□□ -1.26
TMEM253-205ENST00000555314 HIST1H2BMQ99879 126 aa7.21□□□□□ -1.26
TMEM253-205ENST00000555314 HSBP1O75506 76 aa7.2□□□□□ -1.26
TMEM253-205ENST00000555314 SCGB1D1O95968 90 aa7.2□□□□□ -1.26
TMEM253-205ENST00000555314 FAM19A2Q8N3H0 131 aa7.2□□□□□ -1.26
TMEM253-205ENST00000555314 CST9LQ9H4G1 147 aa7.2□□□□□ -1.26
TMEM253-205ENST00000555314 PMVKQ15126 192 aa7.19□□□□□ -1.26
TMEM253-205ENST00000555314 SPAG11AQ6PDA7 123 aa7.19□□□□□ -1.26
TMEM253-205ENST00000555314 FP248Q71RG6 208 aaPredicted RBP7.19□□□□□ -1.26
TMEM253-205ENST00000555314 NKAPP1Q8N9T2 125 aa7.19□□□□□ -1.26
TMEM253-205ENST00000555314 GAGE10A6NGK3 116 aa7.18□□□□□ -1.26
TMEM253-205ENST00000555314 SMIM1B2RUZ4 78 aa7.18□□□□□ -1.26
TMEM253-205ENST00000555314 ATP5LO75964 103 aa7.18□□□□□ -1.26
TMEM253-205ENST00000555314 SPINK8P0C7L1 97 aa7.18□□□□□ -1.26
TMEM253-205ENST00000555314 NDUFA6P56556 154 aa7.18□□□□□ -1.26
TMEM253-205ENST00000555314 PPDPFQ9H3Y8 114 aa7.18□□□□□ -1.26
TMEM253-205ENST00000555314 IGLV5-45A0A087WSX0 123 aa7.17□□□□□ -1.26
TMEM253-205ENST00000555314 COX7B2Q8TF08 81 aa7.17□□□□□ -1.26
TMEM253-205ENST00000555314 TINCRA0A1B0GVN0 87 aa7.16□□□□□ -1.26
TMEM253-205ENST00000555314 KRTAP19-4Q3LI73 84 aa7.16□□□□□ -1.26
TMEM253-205ENST00000555314 IFI27L1Q96BM0 104 aa7.16□□□□□ -1.26
TMEM253-205ENST00000555314 MUC17Q685J3 4493 aa7.16□□□□□ -1.26
TMEM253-205ENST00000555314 ASB16-AS1Q495Z4 193 aa7.15□□□□□ -1.26
TMEM253-205ENST00000555314 LEPROTL1O95214 131 aa7.14□□□□□ -1.27
TMEM253-205ENST00000555314 IGLC3P0DOY3 106 aa7.14□□□□□ -1.27
TMEM253-205ENST00000555314 LINC01547P58512 204 aaPredicted RBP7.14□□□□□ -1.27
TMEM253-205ENST00000555314 COA6Q5JTJ3 125 aaKnown RBP7.14□□□□□ -1.27
TMEM253-205ENST00000555314 PLEKHB2Q96CS7 222 aa7.14□□□□□ -1.27
TMEM253-205ENST00000555314 IGKV2-28A0A075B6P5 120 aa7.13□□□□□ -1.27
TMEM253-205ENST00000555314 IGKV2D-28P01615 120 aa7.13□□□□□ -1.27
TMEM253-205ENST00000555314 FABP4P15090 132 aa7.13□□□□□ -1.27
TMEM253-205ENST00000555314 TMEM126AQ9H061 195 aa7.13□□□□□ -1.27
TMEM253-205ENST00000555314 TRAV12-1A0A0B4J245 112 aa7.12□□□□□ -1.27
TMEM253-205ENST00000555314 PRLHP81277 87 aa7.12□□□□□ -1.27
TMEM253-205ENST00000555314 KRTAP13-3Q3SY46 172 aa7.12□□□□□ -1.27
TMEM253-205ENST00000555314 LINC00337Q8N6G1 96 aa7.12□□□□□ -1.27
TMEM253-205ENST00000555314 C11orf86A6NJI1 115 aa7.11□□□□□ -1.27
TMEM253-205ENST00000555314 PRYO14603 147 aa7.11□□□□□ -1.27
TMEM253-205ENST00000555314 ZNF22P17026 224 aaPredicted RBP7.11□□□□□ -1.27
TMEM253-205ENST00000555314 RPL24P83731 157 aaKnown RBP7.11□□□□□ -1.27
TMEM253-205ENST00000555314 FAM19A1Q7Z5A9 133 aa7.11□□□□□ -1.27
TMEM253-205ENST00000555314 HSPB8Q9UJY1 196 aa7.11□□□□□ -1.27
TMEM253-205ENST00000555314 CHTOPQ9Y3Y2 248 aaKnown RBP7.11□□□□□ -1.27
TMEM253-205ENST00000555314 M0R378 163 aa7.1□□□□□ -1.27
TMEM253-205ENST00000555314 VPREB1P12018 145 aa7.1□□□□□ -1.27
TMEM253-205ENST00000555314 COX17Q14061 63 aa7.1□□□□□ -1.27
TMEM253-205ENST00000555314 XP32Q5T750 250 aa7.1□□□□□ -1.27
TMEM253-205ENST00000555314 TMEM238C9JI98 176 aa7.09□□□□□ -1.27
TMEM253-205ENST00000555314 H0Y8G0 127 aa7.09□□□□□ -1.27
TMEM253-205ENST00000555314 H3BRM9 83 aa7.09□□□□□ -1.27
TMEM253-205ENST00000555314 C3orf22Q8N5N4 141 aa7.09□□□□□ -1.27
TMEM253-205ENST00000555314 ZNF625Q96I27 306 aaPredicted RBP7.09□□□□□ -1.27
TMEM253-205ENST00000555314 SND1-IT1Q9HBX3 110 aa7.09□□□□□ -1.27
TMEM253-205ENST00000555314 IGLV5-39A0A0G2JS06 123 aa7.08□□□□□ -1.28
TMEM253-205ENST00000555314 SEC61BP60468 96 aaKnown RBP7.08□□□□□ -1.28
TMEM253-205ENST00000555314 CRCT1Q9UGL9 99 aa7.08□□□□□ -1.28
TMEM253-205ENST00000555314 ZNF706Q9Y5V0 76 aaPredicted RBP7.08□□□□□ -1.28
TMEM253-205ENST00000555314 SPINK1P00995 79 aa7.07□□□□□ -1.28
TMEM253-205ENST00000555314 PFN2P35080 140 aa7.07□□□□□ -1.28
TMEM253-205ENST00000555314 TMEM170BQ5T4T1 132 aa7.07□□□□□ -1.28
TMEM253-205ENST00000555314 SFTA2Q6UW10 78 aa7.07□□□□□ -1.28
TMEM253-205ENST00000555314 SPRR4Q96PI1 79 aa7.07□□□□□ -1.28
TMEM253-205ENST00000555314 PMCHL2Q9BQD1 86 aa7.06□□□□□ -1.28
TMEM253-205ENST00000555314 MAP1LC3CQ9BXW4 147 aa7.06□□□□□ -1.28
TMEM253-205ENST00000555314 A0A0U1RRA0 63 aa7.05□□□□□ -1.28
TMEM253-205ENST00000555314 SYS1-DBNDD2H3BUS1 97 aa7.05□□□□□ -1.28
TMEM253-205ENST00000555314 HIGD2AQ9BW72 106 aa7.05□□□□□ -1.28
TMEM253-205ENST00000555314 ERG28Q9UKR5 140 aa7.05□□□□□ -1.28
TMEM253-205ENST00000555314 TMEM223A0PJW6 202 aa7.04□□□□□ -1.28
TMEM253-205ENST00000555314 PLNP26678 52 aa7.04□□□□□ -1.28
TMEM253-205ENST00000555314 RPS29P62273 56 aaKnown RBP7.04□□□□□ -1.28
TMEM253-205ENST00000555314 HIST3H2BBQ8N257 126 aa7.04□□□□□ -1.28
TMEM253-205ENST00000555314 DPM2O94777 84 aa7.03□□□□□ -1.28
TMEM253-205ENST00000555314 C3orf79P0CE67 100 aa7.03□□□□□ -1.28
TMEM253-205ENST00000555314 Q8NDZ9 215 aa7.03□□□□□ -1.28
TMEM253-205ENST00000555314 KRTAP4-1Q9BYQ7 146 aa7.03□□□□□ -1.28
TMEM253-205ENST00000555314 NDUFA12Q9UI09 145 aa7.03□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms