RNA–Protein interactions for RNA: ENST00000555254.5

PSEN1-212, Transcript of presenilin 1, humanhuman

TSL 3

Gene PSEN1, Length 754 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-212ENST00000555254 LRCOL1A6NCL2 159 aa11.48□□□□□ -0.57
PSEN1-212ENST00000555254 KRTAP4-5Q9BYR2 181 aa11.48□□□□□ -0.57
PSEN1-212ENST00000555254 CNBPP62633 177 aaKnown RBP11.47□□□□□ -0.57
PSEN1-212ENST00000555254 SOSTDC1Q6X4U4 206 aa11.47□□□□□ -0.57
PSEN1-212ENST00000555254 PKIGQ9Y2B9 76 aa11.47□□□□□ -0.57
PSEN1-212ENST00000555254 PKD1P98161 4303 aa11.47□□□□□ -0.57
PSEN1-212ENST00000555254 A0A0B4J2C4 111 aa11.46□□□□□ -0.57
PSEN1-212ENST00000555254 LOC107984156A0A0G2JMH3 177 aa11.46□□□□□ -0.57
PSEN1-212ENST00000555254 A0A1B0GWB2 263 aa11.46□□□□□ -0.57
PSEN1-212ENST00000555254 SLPIP03973 132 aa11.46□□□□□ -0.57
PSEN1-212ENST00000555254 CFC1BP0CG36 223 aa11.46□□□□□ -0.57
PSEN1-212ENST00000555254 CFC1P0CG37 223 aa11.46□□□□□ -0.57
PSEN1-212ENST00000555254 ARL17AQ8IVW1 177 aa11.46□□□□□ -0.57
PSEN1-212ENST00000555254 IGLV2-33A0A075B6J2 118 aaPredicted RBP11.45□□□□□ -0.58
PSEN1-212ENST00000555254 A0A087WTM6 91 aa11.45□□□□□ -0.58
PSEN1-212ENST00000555254 LOC107984640A0A0U1RRK4 108 aa11.45□□□□□ -0.58
PSEN1-212ENST00000555254 TLX1NBP0CAT3 122 aa11.45□□□□□ -0.58
PSEN1-212ENST00000555254 PRO1854Q9UHT4 67 aa11.45□□□□□ -0.58
PSEN1-212ENST00000555254 K7ERJ3 54 aa11.44□□□□□ -0.58
PSEN1-212ENST00000555254 EIF4EBP3O60516 100 aaPredicted RBP11.44□□□□□ -0.58
PSEN1-212ENST00000555254 RPL18AQ02543 176 aaKnown RBP11.44□□□□□ -0.58
PSEN1-212ENST00000555254 GAGE2EQ4V326 116 aa11.44□□□□□ -0.58
PSEN1-212ENST00000555254 Q8N814 137 aa11.44□□□□□ -0.58
PSEN1-212ENST00000555254 GAGE2DQ9UEU5 116 aa11.44□□□□□ -0.58
PSEN1-212ENST00000555254 C16orf90A8MZG2 172 aa11.43□□□□□ -0.58
PSEN1-212ENST00000555254 TRAV13-2A0A0B4J235 113 aa11.42□□□□□ -0.58
PSEN1-212ENST00000555254 NDUFC2O95298 119 aa11.42□□□□□ -0.58
PSEN1-212ENST00000555254 FUSP35637 526 aaKnown RBP eCLIP11.42□□□□□ -0.58
PSEN1-212ENST00000555254 KRTAP10-2P60368 255 aa11.42□□□□□ -0.58
PSEN1-212ENST00000555254 DNAH11Q96DT5 4516 aa11.41□□□□□ -0.58
PSEN1-212ENST00000555254 TAX1BP3O14907 124 aa11.41□□□□□ -0.58
PSEN1-212ENST00000555254 XAGE1AQ9HD64 81 aa11.41□□□□□ -0.58
PSEN1-212ENST00000555254 GAGE2BQ13066 116 aa11.4□□□□□ -0.58
PSEN1-212ENST00000555254 Q1RN00 199 aa11.4□□□□□ -0.58
PSEN1-212ENST00000555254 Q6ZRP5 223 aa11.4□□□□□ -0.58
PSEN1-212ENST00000555254 C9orf118A6NHY6 69 aa11.39□□□□□ -0.59
PSEN1-212ENST00000555254 H7C2G1 150 aa11.38□□□□□ -0.59
PSEN1-212ENST00000555254 RPL13AP40429 203 aaKnown RBP11.38□□□□□ -0.59
PSEN1-212ENST00000555254 OR13C6PQ8NH95 151 aa11.38□□□□□ -0.59
PSEN1-212ENST00000555254 PGPEP1Q9NXJ5 209 aa11.38□□□□□ -0.59
PSEN1-212ENST00000555254 HERC1Q15751 4861 aa11.38□□□□□ -0.59
PSEN1-212ENST00000555254 PKHD1P08F94 4074 aa11.37□□□□□ -0.59
PSEN1-212ENST00000555254 C9orf163Q8N9P6 203 aa11.37□□□□□ -0.59
PSEN1-212ENST00000555254 H3BUT2 72 aa11.35□□□□□ -0.59
PSEN1-212ENST00000555254 PSMB2P49721 201 aa11.35□□□□□ -0.59
PSEN1-212ENST00000555254 DYNC1H1Q14204 4646 aaKnown RBP11.35□□□□□ -0.59
PSEN1-212ENST00000555254 IGKV2-28A0A075B6P5 120 aa11.34□□□□□ -0.59
PSEN1-212ENST00000555254 TRBV10-2A0A0K0K1G8 114 aa11.34□□□□□ -0.59
PSEN1-212ENST00000555254 TSPAN13O95857 204 aa11.34□□□□□ -0.59
PSEN1-212ENST00000555254 IGKV2D-28P01615 120 aa11.34□□□□□ -0.59
PSEN1-212ENST00000555254 S100A7L2Q5SY68 101 aa11.34□□□□□ -0.59
PSEN1-212ENST00000555254 NCR3O14931 201 aa11.33□□□□□ -0.6
PSEN1-212ENST00000555254 PRR3P79522 188 aaKnown RBP11.33□□□□□ -0.6
PSEN1-212ENST00000555254 LYRM7Q5U5X0 104 aa11.33□□□□□ -0.6
PSEN1-212ENST00000555254 NKAPP1Q8N9T2 125 aa11.33□□□□□ -0.6
PSEN1-212ENST00000555254 M0R378 163 aa11.32□□□□□ -0.6
PSEN1-212ENST00000555254 SCGB1C2P0DMR2 95 aa11.32□□□□□ -0.6
PSEN1-212ENST00000555254 FABP2P12104 132 aa11.32□□□□□ -0.6
PSEN1-212ENST00000555254 C9orf129Q5T035 196 aaKnown RBP11.32□□□□□ -0.6
PSEN1-212ENST00000555254 NAA38Q9BRA0 125 aaKnown RBP11.32□□□□□ -0.6
PSEN1-212ENST00000555254 LINC00474Q9P2X8 69 aa11.32□□□□□ -0.6
PSEN1-212ENST00000555254 PLA2G2DQ9UNK4 145 aa11.32□□□□□ -0.6
PSEN1-212ENST00000555254 IGLV5-52A0A0A0MRZ9 124 aa11.31□□□□□ -0.6
PSEN1-212ENST00000555254 COX6CP09669 75 aa11.31□□□□□ -0.6
PSEN1-212ENST00000555254 VAMP3Q15836 100 aa11.31□□□□□ -0.6
PSEN1-212ENST00000555254 LINC00337Q8N6G1 96 aa11.31□□□□□ -0.6
PSEN1-212ENST00000555254 TMEM126AQ9H061 195 aa11.31□□□□□ -0.6
PSEN1-212ENST00000555254 IGKV2-24A0A0C4DH68 120 aa11.3□□□□□ -0.6
PSEN1-212ENST00000555254 VPREB1P12018 145 aa11.3□□□□□ -0.6
PSEN1-212ENST00000555254 CBY1Q9Y3M2 126 aa11.3□□□□□ -0.6
PSEN1-212ENST00000555254 A0A1B0GV90 55 aa11.29□□□□□ -0.6
PSEN1-212ENST00000555254 A0A1W2PPM0 123 aa11.29□□□□□ -0.6
PSEN1-212ENST00000555254 SDIM1Q6ZPB5 146 aa11.29□□□□□ -0.6
PSEN1-212ENST00000555254 DPH3Q96FX2 82 aa11.29□□□□□ -0.6
PSEN1-212ENST00000555254 A0A096LNI7 61 aa11.28□□□□□ -0.6
PSEN1-212ENST00000555254 UBR4Q5T4S7 5183 aa11.28□□□□□ -0.6
PSEN1-212ENST00000555254 Q8NDZ9 215 aa11.27□□□□□ -0.61
PSEN1-212ENST00000555254 IGLV5-37A0A075B6J1 123 aa11.25□□□□□ -0.61
PSEN1-212ENST00000555254 KRTAP10-1P60331 282 aa11.25□□□□□ -0.61
PSEN1-212ENST00000555254 LINC01620Q4KN68 170 aa11.25□□□□□ -0.61
PSEN1-212ENST00000555254 FAM19A5Q7Z5A7 132 aaPredicted RBP11.25□□□□□ -0.61
PSEN1-212ENST00000555254 RPL28P46779 137 aaKnown RBP11.24□□□□□ -0.61
PSEN1-212ENST00000555254 SERTAD4-AS1Q5TG53 156 aa11.24□□□□□ -0.61
PSEN1-212ENST00000555254 GTF2H5Q6ZYL4 71 aa11.24□□□□□ -0.61
PSEN1-212ENST00000555254 SMIM11BQ8TCY0 68 aa11.24□□□□□ -0.61
PSEN1-212ENST00000555254 TRIAP1O43715 76 aa11.23□□□□□ -0.61
PSEN1-212ENST00000555254 IGLV6-57P01721 117 aa11.23□□□□□ -0.61
PSEN1-212ENST00000555254 SPCS1Q9Y6A9 102 aa11.23□□□□□ -0.61
PSEN1-212ENST00000555254 TRBV10-3A0A0K0K1G6 114 aa11.22□□□□□ -0.61
PSEN1-212ENST00000555254 FAM168BA1KXE4 195 aa11.22□□□□□ -0.61
PSEN1-212ENST00000555254 GAGE10A6NGK3 116 aa11.22□□□□□ -0.61
PSEN1-212ENST00000555254 C22orf24Q9Y442 160 aa11.22□□□□□ -0.61
PSEN1-212ENST00000555254 LRP1BQ9NZR2 4599 aa11.21□□□□□ -0.61
PSEN1-212ENST00000555254 DNAH5Q8TE73 4624 aa11.21□□□□□ -0.61
PSEN1-212ENST00000555254 TRBV20-1A0A075B6N2 111 aa11.21□□□□□ -0.61
PSEN1-212ENST00000555254 CHTF8P0CG12 524 aa11.21□□□□□ -0.61
PSEN1-212ENST00000555254 C7orf33Q8WU49 177 aa11.21□□□□□ -0.61
PSEN1-212ENST00000555254 CDK2AP2O75956 126 aa11.2□□□□□ -0.62
PSEN1-212ENST00000555254 TRAV23DV6A0A075B6W5 121 aa11.19□□□□□ -0.62
PSEN1-212ENST00000555254 H0YGX0 51 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 72.7 ms