RNA–Protein interactions for RNA: ENST00000555164.2

KTN1-219, Transcript of kinectin 1, humanhuman

TSL 4

Gene KTN1, Length 542 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KTN1-219ENST00000555164 SSPOA2VEC9 5147 aa0.04□□□□□ -2.4
KTN1-219ENST00000555164 PKD1L3Q7Z443 1732 aa0.04□□□□□ -2.4
KTN1-219ENST00000555164 SPTBN1Q01082 2364 aaKnown RBP0.03□□□□□ -2.4
KTN1-219ENST00000555164 ZNF720Q7Z2F6 126 aa0.03□□□□□ -2.4
KTN1-219ENST00000555164 COL14A1Q05707 1796 aaKnown RBP0.03□□□□□ -2.4
KTN1-219ENST00000555164 SETXQ7Z333 2677 aaKnown RBP0.03□□□□□ -2.4
KTN1-219ENST00000555164 URB1O60287 2271 aaKnown RBP0.03□□□□□ -2.4
KTN1-219ENST00000555164 BAZ1AQ9NRL2 1556 aaPredicted RBP0.02□□□□□ -2.41
KTN1-219ENST00000555164 MAP1AP78559 2803 aaPredicted RBP0.02□□□□□ -2.41
KTN1-219ENST00000555164 SPTA1P02549 2419 aa0.02□□□□□ -2.41
KTN1-219ENST00000555164 GYPAP02724 150 aa0.02□□□□□ -2.41
KTN1-219ENST00000555164 SPRR2GQ9BYE4 73 aa0.02□□□□□ -2.41
KTN1-219ENST00000555164 STAB2Q8WWQ8 2551 aa0.02□□□□□ -2.41
KTN1-219ENST00000555164 NKTRP30414 1462 aaKnown RBP0.02□□□□□ -2.41
KTN1-219ENST00000555164 WNK1Q9H4A3 2382 aa0.02□□□□□ -2.41
KTN1-219ENST00000555164 HECTD4Q9Y4D8 3996 aa0.02□□□□□ -2.41
KTN1-219ENST00000555164 GVINP1Q7Z2Y8 2422 aa0.02□□□□□ -2.41
KTN1-219ENST00000555164 TENM2Q9NT68 2774 aa0.01□□□□□ -2.41
KTN1-219ENST00000555164 APC2O95996 2303 aa0.01□□□□□ -2.41
KTN1-219ENST00000555164 CSPG4Q6UVK1 2322 aa0.01□□□□□ -2.41
KTN1-219ENST00000555164 MAP1BP46821 2468 aaKnown RBP0.01□□□□□ -2.41
KTN1-219ENST00000555164 LEPROTL1O95214 131 aa0.01□□□□□ -2.41
KTN1-219ENST00000555164 ALKAL2Q6UX46 152 aa0.01□□□□□ -2.41
KTN1-219ENST00000555164 CRIPTQ9P021 101 aa0.01□□□□□ -2.41
KTN1-219ENST00000555164 FLNBO75369 2602 aaKnown RBP0.01□□□□□ -2.41
KTN1-219ENST00000555164 NBEAL1Q6ZS30 2694 aa0.01□□□□□ -2.41
KTN1-219ENST00000555164 PDZD2O15018 2839 aa0.01□□□□□ -2.41
KTN1-219ENST00000555164 CEP162Q5TB80 1403 aa0.01□□□□□ -2.41
KTN1-219ENST00000555164 ALKQ9UM73 1620 aa0.01□□□□□ -2.41
KTN1-219ENST00000555164 STAB1Q9NY15 2570 aa0□□□□□ -2.41
KTN1-219ENST00000555164 D6R8Y8 96 aa0□□□□□ -2.41
KTN1-219ENST00000555164 COX8AP10176 69 aa0□□□□□ -2.41
KTN1-219ENST00000555164 NF1P21359 2839 aa0□□□□□ -2.41
KTN1-219ENST00000555164 ATRQ13535 2644 aa0□□□□□ -2.41
KTN1-219ENST00000555164 CCDC141Q6ZP82 1450 aa0□□□□□ -2.41
KTN1-219ENST00000555164 MUSTN1Q8IVN3 82 aa0□□□□□ -2.41
KTN1-219ENST00000555164 DEFB105AQ8NG35 78 aa0□□□□□ -2.41
KTN1-219ENST00000555164 ACANP16112 2415 aa-0.01□□□□□ -2.41
KTN1-219ENST00000555164 NBPF19A0A087WUL8 3843 aa-0.01□□□□□ -2.41
KTN1-219ENST00000555164 RGPD2P0DJD1 1756 aa-0.01□□□□□ -2.41
KTN1-219ENST00000555164 COL6A3P12111 3177 aa-0.01□□□□□ -2.41
KTN1-219ENST00000555164 DSTQ03001 7570 aaKnown RBP-0.01□□□□□ -2.41
KTN1-219ENST00000555164 HSPG2P98160 4391 aa-0.01□□□□□ -2.41
KTN1-219ENST00000555164 SRRM2Q9UQ35 2752 aaKnown RBP-0.01□□□□□ -2.41
KTN1-219ENST00000555164 KLK9Q2XQG4 91 aa-0.01□□□□□ -2.41
KTN1-219ENST00000555164 AKAP9Q99996 3911 aa-0.01□□□□□ -2.41
KTN1-219ENST00000555164 MXRA5Q9NR99 2828 aa-0.01□□□□□ -2.41
KTN1-219ENST00000555164 TGP01266 2768 aa-0.01□□□□□ -2.41
KTN1-219ENST00000555164 QSER1Q2KHR3 1735 aa-0.01□□□□□ -2.41
KTN1-219ENST00000555164 CHD8Q9HCK8 2581 aa-0.01□□□□□ -2.41
KTN1-219ENST00000555164 HTTP42858 3142 aa-0.02□□□□□ -2.41
KTN1-219ENST00000555164 HIVEP1P15822 2718 aa-0.02□□□□□ -2.41
KTN1-219ENST00000555164 EPG5Q9HCE0 2579 aa-0.02□□□□□ -2.41
KTN1-219ENST00000555164 SPRR2DP22532 72 aa-0.02□□□□□ -2.41
KTN1-219ENST00000555164 KRTAP6-1Q3LI64 71 aa-0.02□□□□□ -2.41
KTN1-219ENST00000555164 UBE2D4Q9Y2X8 147 aa-0.02□□□□□ -2.41
KTN1-219ENST00000555164 ANKHD1Q8IWZ3 2542 aaKnown RBP-0.02□□□□□ -2.41
KTN1-219ENST00000555164 CREBBPQ92793 2442 aa-0.02□□□□□ -2.41
KTN1-219ENST00000555164 CNOT1A5YKK6 2376 aaKnown RBP-0.02□□□□□ -2.41
KTN1-219ENST00000555164 PPLO60437 1756 aa-0.02□□□□□ -2.41
KTN1-219ENST00000555164 SETD2Q9BYW2 2564 aaPredicted RBP-0.02□□□□□ -2.41
KTN1-219ENST00000555164 ZZEF1O43149 2961 aa-0.03□□□□□ -2.41
KTN1-219ENST00000555164 EP300Q09472 2414 aaPredicted RBP-0.03□□□□□ -2.41
KTN1-219ENST00000555164 LRP2P98164 4655 aa-0.03□□□□□ -2.41
KTN1-219ENST00000555164 MUC12Q9UKN1 5478 aa-0.03□□□□□ -2.41
KTN1-219ENST00000555164 MUC2Q02817 5179 aa-0.03□□□□□ -2.41
KTN1-219ENST00000555164 CPSF4LA6NMK7 179 aaKnown RBP-0.03□□□□□ -2.41
KTN1-219ENST00000555164 SPINK4O60575 86 aa-0.03□□□□□ -2.41
KTN1-219ENST00000555164 IGLC2P0DOY2 106 aa-0.03□□□□□ -2.41
KTN1-219ENST00000555164 IGLC3P0DOY3 106 aa-0.03□□□□□ -2.41
KTN1-219ENST00000555164 FXYD6Q9H0Q3 95 aa-0.03□□□□□ -2.41
KTN1-219ENST00000555164 V9GYS6 101 aa-0.03□□□□□ -2.41
KTN1-219ENST00000555164 ALMS1Q8TCU4 4167 aa-0.03□□□□□ -2.41
KTN1-219ENST00000555164 SPG11Q96JI7 2443 aa-0.03□□□□□ -2.41
KTN1-219ENST00000555164 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP-0.03□□□□□ -2.411e-7■■□□□ 12
KTN1-219ENST00000555164 PCNX1Q96RV3 2341 aa-0.03□□□□□ -2.41
KTN1-219ENST00000555164 ABCC3O15438 1527 aa-0.03□□□□□ -2.41
KTN1-219ENST00000555164 LAMA5O15230 3695 aa-0.03□□□□□ -2.41
KTN1-219ENST00000555164 RGPD1P0DJD0 1748 aa-0.04□□□□□ -2.42
KTN1-219ENST00000555164 FLGP20930 4061 aaPredicted RBP-0.04□□□□□ -2.42
KTN1-219ENST00000555164 NBASA2RRP1 2371 aa-0.04□□□□□ -2.42
KTN1-219ENST00000555164 Q9H521 79 aa-0.04□□□□□ -2.42
KTN1-219ENST00000555164 BCORQ6W2J9 1755 aa-0.04□□□□□ -2.42
KTN1-219ENST00000555164 TEP1Q99973 2627 aaKnown RBP-0.04□□□□□ -2.42
KTN1-219ENST00000555164 KNL1Q8NG31 2342 aa-0.04□□□□□ -2.42
KTN1-219ENST00000555164 TIAM2Q8IVF5 1701 aa-0.04□□□□□ -2.42
KTN1-219ENST00000555164 LYSTQ99698 3801 aa-0.05□□□□□ -2.42
KTN1-219ENST00000555164 ITPR3Q14573 2671 aa-0.05□□□□□ -2.42
KTN1-219ENST00000555164 TRANK1O15050 2925 aa-0.05□□□□□ -2.42
KTN1-219ENST00000555164 LOC730098B7Z3J9 87 aa-0.05□□□□□ -2.42
KTN1-219ENST00000555164 HMGN2P05204 90 aaKnown RBP-0.05□□□□□ -2.42
KTN1-219ENST00000555164 SPRR2BP35325 72 aa-0.05□□□□□ -2.42
KTN1-219ENST00000555164 PYY3Q5JQD4 70 aa-0.05□□□□□ -2.42
KTN1-219ENST00000555164 APLNQ9ULZ1 77 aa-0.05□□□□□ -2.42
KTN1-219ENST00000555164 NEXMIFQ5QGS0 1516 aa-0.05□□□□□ -2.42
KTN1-219ENST00000555164 TACC2O95359 2948 aa-0.05□□□□□ -2.42
KTN1-219ENST00000555164 SVEP1Q4LDE5 3571 aa-0.05□□□□□ -2.42
KTN1-219ENST00000555164 UBR3Q6ZT12 1888 aa-0.05□□□□□ -2.42
KTN1-219ENST00000555164 USP9YO00507 2555 aaPredicted RBP-0.05□□□□□ -2.42
KTN1-219ENST00000555164 SPTBN4Q9H254 2564 aa-0.05□□□□□ -2.42
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms