RNA–Protein interactions for RNA: ENST00000555022.5

SYNE2-217, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best)

Gene SYNE2, Length 3,396 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-217ENST00000555022 PRR4Q16378 134 aa6.13□□□□□ -1.43
SYNE2-217ENST00000555022 CCL24O00175 119 aa6.12□□□□□ -1.43
SYNE2-217ENST00000555022 LINC01006Q8NI28 216 aa6.12□□□□□ -1.43
SYNE2-217ENST00000555022 ATRQ13535 2644 aa6.12□□□□□ -1.43
SYNE2-217ENST00000555022 LINC01547P58512 204 aaPredicted RBP6.12□□□□□ -1.43
SYNE2-217ENST00000555022 DEFB105AQ8NG35 78 aa6.12□□□□□ -1.43
SYNE2-217ENST00000555022 V9GYY9 64 aa6.12□□□□□ -1.43
SYNE2-217ENST00000555022 GIG44P09565 113 aaPredicted RBP6.12□□□□□ -1.43
SYNE2-217ENST00000555022 Q6ZVQ6 151 aa6.12□□□□□ -1.43
SYNE2-217ENST00000555022 PKD1L1Q8TDX9 2849 aa6.11□□□□□ -1.43
SYNE2-217ENST00000555022 RPS28P62857 69 aaKnown RBP6.11□□□□□ -1.43
SYNE2-217ENST00000555022 C3orf84H3BNL1 204 aa6.11□□□□□ -1.43
SYNE2-217ENST00000555022 LINC00482Q8N8I6 264 aa6.11□□□□□ -1.43
SYNE2-217ENST00000555022 CELA1Q9UNI1 258 aa6.11□□□□□ -1.43
SYNE2-217ENST00000555022 H7BZZ5 65 aa6.1□□□□□ -1.43
SYNE2-217ENST00000555022 TMEM256-PLSCR3K7ERE1 68 aa6.1□□□□□ -1.43
SYNE2-217ENST00000555022 LYPD5Q6UWN5 251 aa6.1□□□□□ -1.43
SYNE2-217ENST00000555022 BPY2O14599 106 aa6.1□□□□□ -1.43
SYNE2-217ENST00000555022 Q6YL49 198 aa6.1□□□□□ -1.43
SYNE2-217ENST00000555022 CHCHD10Q8WYQ3 142 aaPredicted RBP6.1□□□□□ -1.43
SYNE2-217ENST00000555022 PLAC8L1A1L4L8 177 aa6.1□□□□□ -1.43
SYNE2-217ENST00000555022 HIGD2BQ4VC39 106 aa6.1□□□□□ -1.43
SYNE2-217ENST00000555022 OBSCN-AS1Q96MR7 158 aa6.1□□□□□ -1.43
SYNE2-217ENST00000555022 JMJD7-PLA2G4BH0Y9G9 81 aa6.09□□□□□ -1.43
SYNE2-217ENST00000555022 ITPR2Q14571 2701 aa6.09□□□□□ -1.43
SYNE2-217ENST00000555022 C4orf3Q8WVX3 66 aa6.09□□□□□ -1.43
SYNE2-217ENST00000555022 FAM229BQ4G0N7 80 aa6.09□□□□□ -1.44
SYNE2-217ENST00000555022 FASNP49327 2511 aaKnown RBP6.08□□□□□ -1.44
SYNE2-217ENST00000555022 NDUFC2O95298 119 aa6.08□□□□□ -1.44
SYNE2-217ENST00000555022 TRBV10-3A0A0K0K1G6 114 aa6.07□□□□□ -1.44
SYNE2-217ENST00000555022 IGHV4-31P0DP07 118 aa6.07□□□□□ -1.44
SYNE2-217ENST00000555022 FP248Q71RG6 208 aaPredicted RBP6.07□□□□□ -1.44
SYNE2-217ENST00000555022 KLK12Q9UKR0 248 aa6.07□□□□□ -1.44
SYNE2-217ENST00000555022 HECTD1Q9ULT8 2610 aa6.07□□□□□ -1.44
SYNE2-217ENST00000555022 SPAG11BQ08648 103 aa6.07□□□□□ -1.44
SYNE2-217ENST00000555022 Q6ZQT0 140 aa6.07□□□□□ -1.44
SYNE2-217ENST00000555022 C16orf74Q96GX8 76 aa6.07□□□□□ -1.44
SYNE2-217ENST00000555022 TRBV7-6A0A0J9YX20 115 aa6.06□□□□□ -1.44
SYNE2-217ENST00000555022 REG3AQ06141 175 aa6.06□□□□□ -1.44
SYNE2-217ENST00000555022 DEFB135Q30KP9 77 aa6.06□□□□□ -1.44
SYNE2-217ENST00000555022 LINC00575Q6W349 94 aa6.06□□□□□ -1.44
SYNE2-217ENST00000555022 TRAV7A0A075B6U4 112 aa6.05□□□□□ -1.44
SYNE2-217ENST00000555022 IL17DQ8TAD2 202 aa6.05□□□□□ -1.44
SYNE2-217ENST00000555022 TENM1Q9UKZ4 2725 aa6.05□□□□□ -1.44
SYNE2-217ENST00000555022 CYSRT1A8MQ03 144 aa6.04□□□□□ -1.44
SYNE2-217ENST00000555022 FAM19A3Q7Z5A8 133 aa6.04□□□□□ -1.44
SYNE2-217ENST00000555022 SERP1Q9Y6X1 66 aa6.04□□□□□ -1.44
SYNE2-217ENST00000555022 DNAJC9-AS1A6NH13 148 aa6.04□□□□□ -1.44
SYNE2-217ENST00000555022 LY6G6DO95868 133 aa6.04□□□□□ -1.44
SYNE2-217ENST00000555022 NREPQ16612 68 aa6.04□□□□□ -1.44
SYNE2-217ENST00000555022 FAM30AQ9NZY2 134 aa6.04□□□□□ -1.44
SYNE2-217ENST00000555022 Q8IZM0 81 aa6.04□□□□□ -1.44
SYNE2-217ENST00000555022 RETNQ9HD89 108 aa6.04□□□□□ -1.44
SYNE2-217ENST00000555022 F8WDY8 70 aa6.03□□□□□ -1.44
SYNE2-217ENST00000555022 J3QKU1 62 aa6.03□□□□□ -1.44
SYNE2-217ENST00000555022 ZNF561-AS1K7EIQ3 104 aa6.03□□□□□ -1.44
SYNE2-217ENST00000555022 C1orf195Q5TG92 126 aa6.03□□□□□ -1.44
SYNE2-217ENST00000555022 MUC7Q8TAX7 377 aa6.03□□□□□ -1.44
SYNE2-217ENST00000555022 HIGD2AQ9BW72 106 aa6.03□□□□□ -1.44
SYNE2-217ENST00000555022 WIPF1O43516 503 aa6.03□□□□□ -1.44
SYNE2-217ENST00000555022 MIFP14174 115 aa6.03□□□□□ -1.44
SYNE2-217ENST00000555022 KIAA0087Q14695 138 aa6.03□□□□□ -1.44
SYNE2-217ENST00000555022 A0A0G2JQZ4 141 aa6.02□□□□□ -1.45
SYNE2-217ENST00000555022 A0A1W2PNN7 141 aa6.02□□□□□ -1.45
SYNE2-217ENST00000555022 ATP5EP2Q5VTU8 51 aa6.01□□□□□ -1.45
SYNE2-217ENST00000555022 TMEM254Q8TBM7 123 aa6.01□□□□□ -1.45
SYNE2-217ENST00000555022 PRO0628Q9UI54 55 aa6.01□□□□□ -1.45
SYNE2-217ENST00000555022 HELZ2Q9BYK8 2649 aaKnown RBP6.01□□□□□ -1.45
SYNE2-217ENST00000555022 DEFB116Q30KQ4 102 aa6□□□□□ -1.45
SYNE2-217ENST00000555022 CD164L2Q6UWJ8 174 aa6□□□□□ -1.45
SYNE2-217ENST00000555022 PSPHP1O15172 72 aa6□□□□□ -1.45
SYNE2-217ENST00000555022 DIRC1Q969H9 104 aa6□□□□□ -1.45
SYNE2-217ENST00000555022 NOTCH1P46531 2555 aa5.99□□□□□ -1.45
SYNE2-217ENST00000555022 SMIM26A0A096LP01 95 aa5.99□□□□□ -1.45
SYNE2-217ENST00000555022 COX7BP24311 80 aa5.98□□□□□ -1.45
SYNE2-217ENST00000555022 CSNK1G2-AS1Q8NCQ2 148 aa5.98□□□□□ -1.45
SYNE2-217ENST00000555022 PRO0255Q9UI72 69 aa5.98□□□□□ -1.45
SYNE2-217ENST00000555022 NDUFC2-KCTD14E9PQ53 114 aa5.98□□□□□ -1.45
SYNE2-217ENST00000555022 ZNF73O43830 326 aaPredicted RBP5.98□□□□□ -1.45
SYNE2-217ENST00000555022 C16orf95Q9H693 158 aa5.98□□□□□ -1.45
SYNE2-217ENST00000555022 MAST4O15021 2626 aa5.97□□□□□ -1.45
SYNE2-217ENST00000555022 FUSP35637 526 aaKnown RBP eCLIP5.97□□□□□ -1.45
SYNE2-217ENST00000555022 LINC00167Q96N53 147 aa5.97□□□□□ -1.45
SYNE2-217ENST00000555022 NBEAL1Q6ZS30 2694 aa5.97□□□□□ -1.45
SYNE2-217ENST00000555022 RPL37AP8A6NKH3 93 aa5.97□□□□□ -1.45
SYNE2-217ENST00000555022 C19orf73Q9NVV2 129 aa5.97□□□□□ -1.45
SYNE2-217ENST00000555022 C6orf48Q9UBA6 75 aa5.97□□□□□ -1.45
SYNE2-217ENST00000555022 CAMK2N2Q96S95 79 aa5.96□□□□□ -1.46
SYNE2-217ENST00000555022 COL6A5A8TX70 2615 aa5.96□□□□□ -1.46
SYNE2-217ENST00000555022 FLNBO75369 2602 aaKnown RBP5.96□□□□□ -1.46
SYNE2-217ENST00000555022 SMR3AQ99954 134 aa5.96□□□□□ -1.46
SYNE2-217ENST00000555022 KLKP1Q107X0 134 aa5.95□□□□□ -1.46
SYNE2-217ENST00000555022 SMIM29Q86T20 159 aa5.95□□□□□ -1.46
SYNE2-217ENST00000555022 DSCR9P59020 149 aa5.95□□□□□ -1.46
SYNE2-217ENST00000555022 TRBV7-4A0A0J9YYF1 115 aa5.94□□□□□ -1.46
SYNE2-217ENST00000555022 PRYO14603 147 aa5.94□□□□□ -1.46
SYNE2-217ENST00000555022 TENM3Q9P273 2699 aa5.94□□□□□ -1.46
SYNE2-217ENST00000555022 SRRM2Q9UQ35 2752 aaKnown RBP5.94□□□□□ -1.46
SYNE2-217ENST00000555022 TRRAPQ9Y4A5 3859 aa5.94□□□□□ -1.46
SYNE2-217ENST00000555022 IGLV1-51P01701 117 aa5.93□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms