RNA–Protein interactions for RNA: ENST00000554722.1

GABRB3-207, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 3

Gene GABRB3, Length 406 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-207ENST00000554722 LINC00310P59036 64 aa9.28□□□□□ -0.92
GABRB3-207ENST00000554722 COX17Q14061 63 aa9.28□□□□□ -0.92
GABRB3-207ENST00000554722 A0A0U1RRA0 63 aa9.27□□□□□ -0.93
GABRB3-207ENST00000554722 TMEM238C9JI98 176 aa9.27□□□□□ -0.93
GABRB3-207ENST00000554722 TRGC2P03986 189 aa9.27□□□□□ -0.93
GABRB3-207ENST00000554722 MUC2Q02817 5179 aa9.26□□□□□ -0.93
GABRB3-207ENST00000554722 UBE2AP49459 152 aa9.25□□□□□ -0.93
GABRB3-207ENST00000554722 PRLHP81277 87 aa9.25□□□□□ -0.93
GABRB3-207ENST00000554722 HSBP1O75506 76 aa9.24□□□□□ -0.93
GABRB3-207ENST00000554722 LINC00158P58513 81 aa9.24□□□□□ -0.93
GABRB3-207ENST00000554722 KRTAP13-2Q52LG2 175 aa9.24□□□□□ -0.93
GABRB3-207ENST00000554722 TMEM126AQ9H061 195 aa9.24□□□□□ -0.93
GABRB3-207ENST00000554722 H0Y8G0 127 aa9.23□□□□□ -0.93
GABRB3-207ENST00000554722 M0R378 163 aa9.23□□□□□ -0.93
GABRB3-207ENST00000554722 RPL24P83731 157 aaKnown RBP9.23□□□□□ -0.93
GABRB3-207ENST00000554722 SERF1AO75920 110 aa9.22□□□□□ -0.93
GABRB3-207ENST00000554722 TSPAN13O95857 204 aa9.22□□□□□ -0.93
GABRB3-207ENST00000554722 SMIM13P0DJ93 91 aa9.22□□□□□ -0.93
GABRB3-207ENST00000554722 CRYGAP11844 174 aa9.22□□□□□ -0.93
GABRB3-207ENST00000554722 SFTA2Q6UW10 78 aa9.22□□□□□ -0.93
GABRB3-207ENST00000554722 FAM19A1Q7Z5A9 133 aa9.22□□□□□ -0.93
GABRB3-207ENST00000554722 TSPEAR-AS2P59090 65 aa9.2□□□□□ -0.94
GABRB3-207ENST00000554722 TYMSOSQ8TAI1 123 aa9.2□□□□□ -0.94
GABRB3-207ENST00000554722 TMA7Q9Y2S6 64 aaKnown RBP9.2□□□□□ -0.94
GABRB3-207ENST00000554722 LEPROTL1O95214 131 aa9.19□□□□□ -0.94
GABRB3-207ENST00000554722 A0A0U1RQV1 116 aa9.18□□□□□ -0.94
GABRB3-207ENST00000554722 MEIG1Q5JSS6 88 aa9.18□□□□□ -0.94
GABRB3-207ENST00000554722 MIR7-3HGQ8N6C7 128 aa9.18□□□□□ -0.94
GABRB3-207ENST00000554722 FABP4P15090 132 aa9.17□□□□□ -0.94
GABRB3-207ENST00000554722 NDUFA12Q9UI09 145 aa9.17□□□□□ -0.94
GABRB3-207ENST00000554722 PLEKHB2Q96CS7 222 aa9.16□□□□□ -0.94
GABRB3-207ENST00000554722 PMCHL2Q9BQD1 86 aa9.16□□□□□ -0.94
GABRB3-207ENST00000554722 NCR3O14931 201 aa9.15□□□□□ -0.94
GABRB3-207ENST00000554722 BOD1L2Q8IYS8 172 aa9.15□□□□□ -0.94
GABRB3-207ENST00000554722 LEPROTO15243 131 aa9.14□□□□□ -0.95
GABRB3-207ENST00000554722 HERV-K104P63124 156 aa9.14□□□□□ -0.95
GABRB3-207ENST00000554722 FAM229BQ4G0N7 80 aa9.14□□□□□ -0.95
GABRB3-207ENST00000554722 MYMXA0A1B0GTQ4 84 aa9.13□□□□□ -0.95
GABRB3-207ENST00000554722 C3orf22Q8N5N4 141 aa9.13□□□□□ -0.95
GABRB3-207ENST00000554722 DAND5Q8N907 189 aa9.13□□□□□ -0.95
GABRB3-207ENST00000554722 HIGD2AQ9BW72 106 aa9.13□□□□□ -0.95
GABRB3-207ENST00000554722 HSPB8Q9UJY1 196 aa9.11□□□□□ -0.95
GABRB3-207ENST00000554722 J3QQQ9 107 aa9.1□□□□□ -0.95
GABRB3-207ENST00000554722 PRYO14603 147 aa9.1□□□□□ -0.95
GABRB3-207ENST00000554722 DPM2O94777 84 aa9.1□□□□□ -0.95
GABRB3-207ENST00000554722 SPRR1AP35321 89 aa9.1□□□□□ -0.95
GABRB3-207ENST00000554722 LINC00304Q8N9R0 145 aa9.1□□□□□ -0.95
GABRB3-207ENST00000554722 RETNLBQ9BQ08 111 aa9.1□□□□□ -0.95
GABRB3-207ENST00000554722 IGKV2D-26A0A0A0MRZ7 120 aa9.09□□□□□ -0.95
GABRB3-207ENST00000554722 TRBV10-3A0A0K0K1G6 114 aa9.09□□□□□ -0.95
GABRB3-207ENST00000554722 KRTAP4-16G5E9R7 235 aaPredicted RBP9.09□□□□□ -0.95
GABRB3-207ENST00000554722 IGKCP01834 107 aa9.09□□□□□ -0.95
GABRB3-207ENST00000554722 PLNP26678 52 aa9.09□□□□□ -0.95
GABRB3-207ENST00000554722 SPRR4Q96PI1 79 aa9.09□□□□□ -0.95
GABRB3-207ENST00000554722 KCNQ1DNQ9H478 68 aa9.09□□□□□ -0.95
GABRB3-207ENST00000554722 LINC00587B1AMM8 73 aa9.08□□□□□ -0.96
GABRB3-207ENST00000554722 HIST1H2BKO60814 126 aa9.08□□□□□ -0.96
GABRB3-207ENST00000554722 HIST1H2BJP06899 126 aa9.08□□□□□ -0.96
GABRB3-207ENST00000554722 HIST1H2BOP23527 126 aa9.08□□□□□ -0.96
GABRB3-207ENST00000554722 HIST1H2BBP33778 126 aa9.08□□□□□ -0.96
GABRB3-207ENST00000554722 HIST1H2BDP58876 126 aa9.08□□□□□ -0.96
GABRB3-207ENST00000554722 HIST1H2BCP62807 126 aa9.08□□□□□ -0.96
GABRB3-207ENST00000554722 HIST2H2BEQ16778 126 aa9.08□□□□□ -0.96
GABRB3-207ENST00000554722 HIST2H2BFQ5QNW6 126 aaPredicted RBP9.08□□□□□ -0.96
GABRB3-207ENST00000554722 HIST1H2BHQ93079 126 aa9.08□□□□□ -0.96
GABRB3-207ENST00000554722 HIST1H2BNQ99877 126 aa9.08□□□□□ -0.96
GABRB3-207ENST00000554722 HIST1H2BMQ99879 126 aa9.08□□□□□ -0.96
GABRB3-207ENST00000554722 LOC107984156A0A0G2JMH3 177 aa9.07□□□□□ -0.96
GABRB3-207ENST00000554722 S100A6P06703 90 aa9.07□□□□□ -0.96
GABRB3-207ENST00000554722 ARL17AQ8IVW1 177 aa9.07□□□□□ -0.96
GABRB3-207ENST00000554722 MAP1LC3CQ9BXW4 147 aa9.07□□□□□ -0.96
GABRB3-207ENST00000554722 EIF4EBP3O60516 100 aaPredicted RBP9.06□□□□□ -0.96
GABRB3-207ENST00000554722 LINC00337Q8N6G1 96 aa9.06□□□□□ -0.96
GABRB3-207ENST00000554722 SMCR5Q8TEV8 140 aa9.06□□□□□ -0.96
GABRB3-207ENST00000554722 LGALS3P17931 250 aaKnown RBP9.05□□□□□ -0.96
GABRB3-207ENST00000554722 HERVK_113P61574 105 aa9.05□□□□□ -0.96
GABRB3-207ENST00000554722 SOSTDC1Q6X4U4 206 aa9.05□□□□□ -0.96
GABRB3-207ENST00000554722 ADAMTSL4-AS1Q5T5F5 129 aa9.04□□□□□ -0.96
GABRB3-207ENST00000554722 LOC105371267A0A1B0GV96 52 aa9.03□□□□□ -0.96
GABRB3-207ENST00000554722 C5orf52A6NGY3 159 aa9.03□□□□□ -0.96
GABRB3-207ENST00000554722 NMUP48645 174 aa9.03□□□□□ -0.96
GABRB3-207ENST00000554722 COA6Q5JTJ3 125 aaKnown RBP9.03□□□□□ -0.96
GABRB3-207ENST00000554722 PPDPFQ9H3Y8 114 aa9.03□□□□□ -0.96
GABRB3-207ENST00000554722 FAT4Q6V0I7 4981 aa9.02□□□□□ -0.96
GABRB3-207ENST00000554722 A0A0J9YXY3 114 aa9.02□□□□□ -0.97
GABRB3-207ENST00000554722 ETDCA0A1B0GVM5 59 aa9.02□□□□□ -0.97
GABRB3-207ENST00000554722 B5MCH6 92 aa9.02□□□□□ -0.97
GABRB3-207ENST00000554722 ERC2-IT1O76042 136 aa9.02□□□□□ -0.97
GABRB3-207ENST00000554722 DDTP30046 118 aa9.02□□□□□ -0.97
GABRB3-207ENST00000554722 NPC2P61916 151 aa9.02□□□□□ -0.97
GABRB3-207ENST00000554722 SNRPEP62304 92 aaKnown RBP9.02□□□□□ -0.97
GABRB3-207ENST00000554722 CTAG1AP78358 180 aa9.02□□□□□ -0.97
GABRB3-207ENST00000554722 E9PLD3 99 aa9.01□□□□□ -0.97
GABRB3-207ENST00000554722 SYS1-DBNDD2H3BUS1 97 aa9.01□□□□□ -0.97
GABRB3-207ENST00000554722 CDIP1Q9H305 208 aa9.01□□□□□ -0.97
GABRB3-207ENST00000554722 TRBV10-2A0A0K0K1G8 114 aa9□□□□□ -0.97
GABRB3-207ENST00000554722 Q9BRP9 147 aa9□□□□□ -0.97
GABRB3-207ENST00000554722 TPRXLQ17RH7 258 aa8.99□□□□□ -0.97
GABRB3-207ENST00000554722 ZNF706Q9Y5V0 76 aaPredicted RBP8.99□□□□□ -0.97
GABRB3-207ENST00000554722 MUC17Q685J3 4493 aa8.98□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms