RNA–Protein interactions for RNA: ENST00000554684.5

PPP4R3A-205, Transcript of protein phosphatase 4 regulatory subunit 3A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PPP4R3A, Length 4,108 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3A-205ENST00000554684 LST1O00453 97 aa11.18□□□□□ -0.62
PPP4R3A-205ENST00000554684 XGP55808 180 aa11.18□□□□□ -0.62
PPP4R3A-205ENST00000554684 COX7BP24311 80 aa11.18□□□□□ -0.62
PPP4R3A-205ENST00000554684 IGKV3D-7A0A0C4DH55 119 aa11.17□□□□□ -0.62
PPP4R3A-205ENST00000554684 UBE2AP49459 152 aa11.17□□□□□ -0.62
PPP4R3A-205ENST00000554684 SPENQ96T58 3664 aaKnown RBP11.17□□□□□ -0.62
PPP4R3A-205ENST00000554684 IGLV5-39A0A0G2JS06 123 aa11.16□□□□□ -0.62
PPP4R3A-205ENST00000554684 RPL37AP8A6NKH3 93 aa11.16□□□□□ -0.62
PPP4R3A-205ENST00000554684 FAM236AA0A1B0GUQ0 79 aa11.16□□□□□ -0.62
PPP4R3A-205ENST00000554684 FAM236BA0A1B0GV22 79 aa11.16□□□□□ -0.62
PPP4R3A-205ENST00000554684 hADV29S1A0JD25 119 aa11.16□□□□□ -0.62
PPP4R3A-205ENST00000554684 USP17L23D6RBM5 183 aa11.16□□□□□ -0.62
PPP4R3A-205ENST00000554684 NHLRC4P0CG21 123 aaPredicted RBP11.15□□□□□ -0.62
PPP4R3A-205ENST00000554684 TMEM256-PLSCR3K7ERE1 68 aa11.14□□□□□ -0.63
PPP4R3A-205ENST00000554684 TRACP01848 142 aa11.14□□□□□ -0.63
PPP4R3A-205ENST00000554684 FBN1P35555 2871 aaKnown RBP11.14□□□□□ -0.63
PPP4R3A-205ENST00000554684 PLAC8L1A1L4L8 177 aa11.13□□□□□ -0.63
PPP4R3A-205ENST00000554684 RBM3P98179 157 aaKnown RBP11.13□□□□□ -0.63
PPP4R3A-205ENST00000554684 C14orf177Q52M58 125 aa11.13□□□□□ -0.63
PPP4R3A-205ENST00000554684 JMJD7-PLA2G4BH0Y9G9 81 aa11.12□□□□□ -0.63
PPP4R3A-205ENST00000554684 ACYP1P07311 99 aa11.12□□□□□ -0.63
PPP4R3A-205ENST00000554684 NDUFV3P56181 108 aaKnown RBP11.11□□□□□ -0.63
PPP4R3A-205ENST00000554684 IGLV5-45A0A087WSX0 123 aa11.11□□□□□ -0.63
PPP4R3A-205ENST00000554684 COX17Q14061 63 aa11.11□□□□□ -0.63
PPP4R3A-205ENST00000554684 Q6ZQY7 126 aa11.1□□□□□ -0.63
PPP4R3A-205ENST00000554684 B9D2Q9BPU9 175 aa11.1□□□□□ -0.63
PPP4R3A-205ENST00000554684 TRAV23DV6A0A075B6W5 121 aa11.1□□□□□ -0.63
PPP4R3A-205ENST00000554684 LINC00337Q8N6G1 96 aa11.09□□□□□ -0.63
PPP4R3A-205ENST00000554684 FAM19A1Q7Z5A9 133 aa11.07□□□□□ -0.64
PPP4R3A-205ENST00000554684 SOSTDC1Q6X4U4 206 aa11.07□□□□□ -0.64
PPP4R3A-205ENST00000554684 TENM1Q9UKZ4 2725 aa11.07□□□□□ -0.64
PPP4R3A-205ENST00000554684 LINC00588Q9Y4M8 146 aa11.07□□□□□ -0.64
PPP4R3A-205ENST00000554684 PPDPFQ9H3Y8 114 aa11.06□□□□□ -0.64
PPP4R3A-205ENST00000554684 TRBV10-3A0A0K0K1G6 114 aa11.05□□□□□ -0.64
PPP4R3A-205ENST00000554684 EGFEM1PQ0D2K5 195 aa11.05□□□□□ -0.64
PPP4R3A-205ENST00000554684 FUSP35637 526 aaKnown RBP eCLIP11.05□□□□□ -0.64
PPP4R3A-205ENST00000554684 RPL28P46779 137 aaKnown RBP11.05□□□□□ -0.64
PPP4R3A-205ENST00000554684 MUC7Q8TAX7 377 aa11.04□□□□□ -0.64
PPP4R3A-205ENST00000554684 M0R378 163 aa11.04□□□□□ -0.64
PPP4R3A-205ENST00000554684 Q6ZRU5 148 aa11.04□□□□□ -0.64
PPP4R3A-205ENST00000554684 A0A087WYN8 130 aa11.03□□□□□ -0.64
PPP4R3A-205ENST00000554684 ZNF73O43830 326 aaPredicted RBP11.03□□□□□ -0.64
PPP4R3A-205ENST00000554684 C10orf25Q5T742 122 aa11.03□□□□□ -0.64
PPP4R3A-205ENST00000554684 C1orf134Q5TEV5 83 aa11.03□□□□□ -0.64
PPP4R3A-205ENST00000554684 EIF4EBP3O60516 100 aaPredicted RBP11.02□□□□□ -0.65
PPP4R3A-205ENST00000554684 PDZD2O15018 2839 aa11.01□□□□□ -0.65
PPP4R3A-205ENST00000554684 A0A1B0GX51 115 aa11□□□□□ -0.65
PPP4R3A-205ENST00000554684 NREPQ16612 68 aa11□□□□□ -0.65
PPP4R3A-205ENST00000554684 CCDC179H3BU77 68 aa11□□□□□ -0.65
PPP4R3A-205ENST00000554684 LINC00643Q86TS7 51 aa10.99□□□□□ -0.65
PPP4R3A-205ENST00000554684 NDUFC2-KCTD14E9PQ53 114 aa10.99□□□□□ -0.65
PPP4R3A-205ENST00000554684 PKIGQ9Y2B9 76 aa10.99□□□□□ -0.65
PPP4R3A-205ENST00000554684 CDK2AP2O75956 126 aa10.98□□□□□ -0.65
PPP4R3A-205ENST00000554684 LITAFQ99732 161 aa10.98□□□□□ -0.65
PPP4R3A-205ENST00000554684 IGLV5-52A0A0A0MRZ9 124 aa10.98□□□□□ -0.65
PPP4R3A-205ENST00000554684 LINC01556Q5JQF7 62 aa10.98□□□□□ -0.65
PPP4R3A-205ENST00000554684 SDIM1Q6ZPB5 146 aa10.98□□□□□ -0.65
PPP4R3A-205ENST00000554684 PKD1L1Q8TDX9 2849 aa10.97□□□□□ -0.65
PPP4R3A-205ENST00000554684 ENHOQ6UWT2 76 aa10.97□□□□□ -0.65
PPP4R3A-205ENST00000554684 LOC107984640A0A0U1RRK4 108 aa10.96□□□□□ -0.65
PPP4R3A-205ENST00000554684 SMCPP49901 116 aaPredicted RBP10.96□□□□□ -0.65
PPP4R3A-205ENST00000554684 CDIP1Q9H305 208 aa10.96□□□□□ -0.65
PPP4R3A-205ENST00000554684 LINC01561Q8N1V8 128 aa10.96□□□□□ -0.66
PPP4R3A-205ENST00000554684 WWC2-AS2Q96NR7 200 aa10.95□□□□□ -0.66
PPP4R3A-205ENST00000554684 H3BQ85 93 aa10.94□□□□□ -0.66
PPP4R3A-205ENST00000554684 SCXQ7RTU7 201 aa10.94□□□□□ -0.66
PPP4R3A-205ENST00000554684 Q8N814 137 aa10.94□□□□□ -0.66
PPP4R3A-205ENST00000554684 C6orf48Q9UBA6 75 aa10.94□□□□□ -0.66
PPP4R3A-205ENST00000554684 M0QXV9 152 aa10.94□□□□□ -0.66
PPP4R3A-205ENST00000554684 NDUFC2O95298 119 aa10.93□□□□□ -0.66
PPP4R3A-205ENST00000554684 LINC00612Q8N6U2 182 aa10.93□□□□□ -0.66
PPP4R3A-205ENST00000554684 TM2D3Q9BRN9 247 aa10.93□□□□□ -0.66
PPP4R3A-205ENST00000554684 PRO0461Q9UI25 63 aa10.93□□□□□ -0.66
PPP4R3A-205ENST00000554684 H3BNG1 76 aa10.92□□□□□ -0.66
PPP4R3A-205ENST00000554684 CCKP06307 115 aa10.92□□□□□ -0.66
PPP4R3A-205ENST00000554684 C2orf48Q96LS8 159 aa10.92□□□□□ -0.66
PPP4R3A-205ENST00000554684 ATOX1O00244 68 aa10.91□□□□□ -0.66
PPP4R3A-205ENST00000554684 PDE6GP18545 87 aa10.91□□□□□ -0.66
PPP4R3A-205ENST00000554684 VWFP04275 2813 aa10.91□□□□□ -0.66
PPP4R3A-205ENST00000554684 C3orf84H3BNL1 204 aa10.9□□□□□ -0.66
PPP4R3A-205ENST00000554684 DNAH10OSP0CZ25 163 aa10.9□□□□□ -0.66
PPP4R3A-205ENST00000554684 NBDYA0A0U1RRE5 68 aa10.9□□□□□ -0.67
PPP4R3A-205ENST00000554684 FAM218AQ96MZ4 157 aa10.9□□□□□ -0.67
PPP4R3A-205ENST00000554684 C7orf33Q8WU49 177 aa10.89□□□□□ -0.67
PPP4R3A-205ENST00000554684 CHTF8P0CG12 524 aa10.87□□□□□ -0.67
PPP4R3A-205ENST00000554684 HRCT1Q6UXD1 115 aa10.86□□□□□ -0.67
PPP4R3A-205ENST00000554684 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP10.86□□□□□ -0.67
PPP4R3A-205ENST00000554684 BPY2O14599 106 aa10.84□□□□□ -0.67
PPP4R3A-205ENST00000554684 UPK3BQ9BT76 320 aa10.84□□□□□ -0.67
PPP4R3A-205ENST00000554684 C4orf48Q5BLP8 95 aa10.84□□□□□ -0.67
PPP4R3A-205ENST00000554684 FAM104AQ969W3 186 aa10.84□□□□□ -0.67
PPP4R3A-205ENST00000554684 DHRS4-AS1Q9P1J3 65 aa10.84□□□□□ -0.67
PPP4R3A-205ENST00000554684 UQCRQO14949 82 aa10.83□□□□□ -0.68
PPP4R3A-205ENST00000554684 LINC00575Q6W349 94 aa10.83□□□□□ -0.68
PPP4R3A-205ENST00000554684 IGLV9-49A0A0B4J1Y8 123 aa10.82□□□□□ -0.68
PPP4R3A-205ENST00000554684 PRLHP81277 87 aa10.82□□□□□ -0.68
PPP4R3A-205ENST00000554684 FAM19A3Q7Z5A8 133 aa10.82□□□□□ -0.68
PPP4R3A-205ENST00000554684 BSNQ9UPA5 3926 aa10.82□□□□□ -0.68
PPP4R3A-205ENST00000554684 J3KT08 172 aa10.82□□□□□ -0.68
PPP4R3A-205ENST00000554684 KIAA0087Q14695 138 aa10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 108 ms