RNA–Protein interactions for RNA: ENST00000554660.1

VPS33B-204, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 3

Gene VPS33B, Length 1,055 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-204ENST00000554660 TRACP01848 142 aa7.73□□□□□ -1.17
VPS33B-204ENST00000554660 KRTAP10-1P60331 282 aa7.73□□□□□ -1.17
VPS33B-204ENST00000554660 HAMPP81172 84 aa7.73□□□□□ -1.17
VPS33B-204ENST00000554660 COX6A2Q02221 97 aa7.73□□□□□ -1.17
VPS33B-204ENST00000554660 C2orf82Q6UX34 121 aa7.73□□□□□ -1.17
VPS33B-204ENST00000554660 NTN5Q8WTR8 489 aaPredicted RBP7.73□□□□□ -1.17
VPS33B-204ENST00000554660 A0A096LPF7 62 aa7.72□□□□□ -1.17
VPS33B-204ENST00000554660 SMR3BP02814 79 aaPredicted RBP7.72□□□□□ -1.17
VPS33B-204ENST00000554660 ACYP1P07311 99 aa7.72□□□□□ -1.17
VPS33B-204ENST00000554660 LINC01561Q8N1V8 128 aa7.72□□□□□ -1.17
VPS33B-204ENST00000554660 FLG2Q5D862 2391 aaPredicted RBP7.71□□□□□ -1.17
VPS33B-204ENST00000554660 TRAV8-4A0A0B4J246 113 aa7.71□□□□□ -1.18
VPS33B-204ENST00000554660 MT-ATP8P03928 68 aa7.71□□□□□ -1.18
VPS33B-204ENST00000554660 CKS1BP61024 79 aa7.71□□□□□ -1.18
VPS33B-204ENST00000554660 HMCN2Q8NDA2 5059 aa7.71□□□□□ -1.18
VPS33B-204ENST00000554660 SRRM2Q9UQ35 2752 aaKnown RBP7.7□□□□□ -1.18
VPS33B-204ENST00000554660 TRAV13-2A0A0B4J235 113 aa7.7□□□□□ -1.18
VPS33B-204ENST00000554660 GAGE12JA6NER3 117 aa7.7□□□□□ -1.18
VPS33B-204ENST00000554660 H3BNG1 76 aa7.7□□□□□ -1.18
VPS33B-204ENST00000554660 GAGE4Q13068 117 aa7.7□□□□□ -1.18
VPS33B-204ENST00000554660 GAGE5Q13069 117 aa7.7□□□□□ -1.18
VPS33B-204ENST00000554660 TRGV2A0A075B6R0 118 aa7.69□□□□□ -1.18
VPS33B-204ENST00000554660 MEIG1Q5JSS6 88 aa7.69□□□□□ -1.18
VPS33B-204ENST00000554660 A0A087WTM6 91 aa7.68□□□□□ -1.18
VPS33B-204ENST00000554660 TRBV6-8A0A0A6YYG3 113 aa7.68□□□□□ -1.18
VPS33B-204ENST00000554660 TRAV13-1A0A0B4J241 112 aa7.68□□□□□ -1.18
VPS33B-204ENST00000554660 TRGV4A0A0C4DH28 118 aa7.68□□□□□ -1.18
VPS33B-204ENST00000554660 IBA57-AS1B1ANH7 110 aa7.68□□□□□ -1.18
VPS33B-204ENST00000554660 SNCGO76070 127 aa7.68□□□□□ -1.18
VPS33B-204ENST00000554660 FHL2Q14192 279 aa7.68□□□□□ -1.18
VPS33B-204ENST00000554660 COX7B2Q8TF08 81 aa7.68□□□□□ -1.18
VPS33B-204ENST00000554660 A0A087WZ39 114 aa7.67□□□□□ -1.18
VPS33B-204ENST00000554660 RPL28P46779 137 aaKnown RBP7.67□□□□□ -1.18
VPS33B-204ENST00000554660 IGHV3OR16-9A0A0B4J2B5 98 aa7.66□□□□□ -1.18
VPS33B-204ENST00000554660 TEX49A0A1B0GTD5 131 aa7.66□□□□□ -1.18
VPS33B-204ENST00000554660 A0A1B0GUV1 79 aa7.66□□□□□ -1.18
VPS33B-204ENST00000554660 J3QL48 77 aa7.66□□□□□ -1.18
VPS33B-204ENST00000554660 SOSTDC1Q6X4U4 206 aa7.66□□□□□ -1.18
VPS33B-204ENST00000554660 FAM229AH3BQW9 127 aa7.65□□□□□ -1.18
VPS33B-204ENST00000554660 GAGE2BQ13066 116 aa7.65□□□□□ -1.18
VPS33B-204ENST00000554660 GAGE2EQ4V326 116 aa7.65□□□□□ -1.18
VPS33B-204ENST00000554660 CLEC2BQ92478 149 aa7.65□□□□□ -1.18
VPS33B-204ENST00000554660 IMUPQ9GZP8 106 aa7.65□□□□□ -1.18
VPS33B-204ENST00000554660 GAGE2DQ9UEU5 116 aa7.65□□□□□ -1.18
VPS33B-204ENST00000554660 H0YGX0 51 aa7.64□□□□□ -1.19
VPS33B-204ENST00000554660 CRPP02741 224 aa7.64□□□□□ -1.19
VPS33B-204ENST00000554660 DAND5Q8N907 189 aa7.64□□□□□ -1.19
VPS33B-204ENST00000554660 DNAH8Q96JB1 4490 aa7.63□□□□□ -1.19
VPS33B-204ENST00000554660 TRBV7-7A0A0K0K1E9 115 aa7.63□□□□□ -1.19
VPS33B-204ENST00000554660 PAX4O43316 350 aa7.63□□□□□ -1.19
VPS33B-204ENST00000554660 NPC2P61916 151 aa7.63□□□□□ -1.19
VPS33B-204ENST00000554660 LYPD5Q6UWN5 251 aa7.62□□□□□ -1.19
VPS33B-204ENST00000554660 SDIM1Q6ZPB5 146 aa7.62□□□□□ -1.19
VPS33B-204ENST00000554660 WFDC10BQ8IUB3 73 aa7.62□□□□□ -1.19
VPS33B-204ENST00000554660 IGLV5-52A0A0A0MRZ9 124 aa7.61□□□□□ -1.19
VPS33B-204ENST00000554660 CXCL5P42830 114 aa7.61□□□□□ -1.19
VPS33B-204ENST00000554660 GAGE6Q13070 117 aa7.61□□□□□ -1.19
VPS33B-204ENST00000554660 Q8IZM0 81 aa7.61□□□□□ -1.19
VPS33B-204ENST00000554660 ANAPC13Q9BS18 74 aa7.61□□□□□ -1.19
VPS33B-204ENST00000554660 CHCHD5Q9BSY4 110 aa7.61□□□□□ -1.19
VPS33B-204ENST00000554660 SND1-IT1Q9HBX3 110 aa7.61□□□□□ -1.19
VPS33B-204ENST00000554660 LINC00959A0A1B0GUT2 108 aa7.6□□□□□ -1.19
VPS33B-204ENST00000554660 A0A1B0GX51 115 aa7.6□□□□□ -1.19
VPS33B-204ENST00000554660 SS18Q15532 418 aa7.6□□□□□ -1.19
VPS33B-204ENST00000554660 MIR7-3HGQ8N6C7 128 aa7.6□□□□□ -1.19
VPS33B-204ENST00000554660 PRO0255Q9UI72 69 aa7.6□□□□□ -1.19
VPS33B-204ENST00000554660 IGLV4-60A0A075B6I1 120 aa7.59□□□□□ -1.19
VPS33B-204ENST00000554660 LOC100131303A0A0U1RQF7 123 aa7.59□□□□□ -1.19
VPS33B-204ENST00000554660 NDUFV3P56181 108 aaKnown RBP7.59□□□□□ -1.19
VPS33B-204ENST00000554660 COX17Q14061 63 aa7.59□□□□□ -1.19
VPS33B-204ENST00000554660 IGKV2-28A0A075B6P5 120 aa7.58□□□□□ -1.2
VPS33B-204ENST00000554660 IGKV2D-28P01615 120 aa7.58□□□□□ -1.2
VPS33B-204ENST00000554660 BAALC-AS2P0C853 105 aa7.58□□□□□ -1.2
VPS33B-204ENST00000554660 LINC00643Q86TS7 51 aa7.58□□□□□ -1.2
VPS33B-204ENST00000554660 FAM30AQ9NZY2 134 aa7.58□□□□□ -1.2
VPS33B-204ENST00000554660 NDUFC2O95298 119 aa7.57□□□□□ -1.2
VPS33B-204ENST00000554660 LINC00337Q8N6G1 96 aa7.57□□□□□ -1.2
VPS33B-204ENST00000554660 LRP1Q07954 4544 aaKnown RBP7.57□□□□□ -1.2
VPS33B-204ENST00000554660 LRCOL1A6NCL2 159 aa7.56□□□□□ -1.2
VPS33B-204ENST00000554660 KRTAP29-1A8MX34 341 aaPredicted RBP7.56□□□□□ -1.2
VPS33B-204ENST00000554660 PSCAO43653 123 aa7.56□□□□□ -1.2
VPS33B-204ENST00000554660 GYPEP15421 78 aa7.56□□□□□ -1.2
VPS33B-204ENST00000554660 LINC00158P58513 81 aa7.56□□□□□ -1.2
VPS33B-204ENST00000554660 A0A0U1RRA0 63 aa7.55□□□□□ -1.2
VPS33B-204ENST00000554660 DNAL4O96015 105 aa7.55□□□□□ -1.2
VPS33B-204ENST00000554660 MALP21145 153 aa7.55□□□□□ -1.2
VPS33B-204ENST00000554660 Q8N814 137 aa7.55□□□□□ -1.2
VPS33B-204ENST00000554660 OBSCN-AS1Q96MR7 158 aa7.55□□□□□ -1.2
VPS33B-204ENST00000554660 TOMM7Q9P0U1 55 aa7.55□□□□□ -1.2
VPS33B-204ENST00000554660 FAT3Q8TDW7 4589 aa7.54□□□□□ -1.2
VPS33B-204ENST00000554660 C6orf226Q5I0X4 101 aa7.54□□□□□ -1.2
VPS33B-204ENST00000554660 CD164L2Q6UWJ8 174 aa7.54□□□□□ -1.2
VPS33B-204ENST00000554660 LINC00528Q8N1L1 170 aa7.54□□□□□ -1.2
VPS33B-204ENST00000554660 SMIM11BQ8TCY0 68 aa7.54□□□□□ -1.2
VPS33B-204ENST00000554660 LINC00167Q96N53 147 aa7.54□□□□□ -1.2
VPS33B-204ENST00000554660 Q9HAA7 133 aa7.54□□□□□ -1.2
VPS33B-204ENST00000554660 C22orf24Q9Y442 160 aa7.54□□□□□ -1.2
VPS33B-204ENST00000554660 PLA2G1BP04054 148 aaKnown RBP7.53□□□□□ -1.2
VPS33B-204ENST00000554660 FAM218AQ96MZ4 157 aa7.53□□□□□ -1.2
VPS33B-204ENST00000554660 SERTAD4-AS1Q5TG53 156 aa7.51□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms