RNA–Protein interactions for RNA: ENST00000554636.1

VTI1B-203, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

TSL 3

Gene VTI1B, Length 565 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-203ENST00000554636 RHEBQ15382 184 aa2.52□□□□□ -2.01
VTI1B-203ENST00000554636 C9orf129Q5T035 196 aaKnown RBP2.52□□□□□ -2.01
VTI1B-203ENST00000554636 C2orf82Q6UX34 121 aa2.52□□□□□ -2.01
VTI1B-203ENST00000554636 LINC01600Q96MT4 127 aa2.52□□□□□ -2.01
VTI1B-203ENST00000554636 PSORS1C2Q9UIG4 136 aa2.52□□□□□ -2.01
VTI1B-203ENST00000554636 RNF213Q63HN8 5207 aa2.51□□□□□ -2.01
VTI1B-203ENST00000554636 A0A096LNJ9 63 aa2.51□□□□□ -2.01
VTI1B-203ENST00000554636 NDUFC2-KCTD14E9PQ53 114 aa2.51□□□□□ -2.01
VTI1B-203ENST00000554636 M0QXV9 152 aa2.51□□□□□ -2.01
VTI1B-203ENST00000554636 MT-ND6P03923 174 aa2.51□□□□□ -2.01
VTI1B-203ENST00000554636 G0S2P27469 103 aa2.51□□□□□ -2.01
VTI1B-203ENST00000554636 KRTAP10-8P60410 259 aa2.51□□□□□ -2.01
VTI1B-203ENST00000554636 HERVK_113P63121 156 aa2.51□□□□□ -2.01
VTI1B-203ENST00000554636 SEC11AP67812 179 aa2.51□□□□□ -2.01
VTI1B-203ENST00000554636 COX19Q49B96 90 aa2.51□□□□□ -2.01
VTI1B-203ENST00000554636 C1orf137Q5JT78 98 aa2.51□□□□□ -2.01
VTI1B-203ENST00000554636 ERASQ7Z444 233 aa2.51□□□□□ -2.01
VTI1B-203ENST00000554636 FAM19A5Q7Z5A7 132 aaPredicted RBP2.51□□□□□ -2.01
VTI1B-203ENST00000554636 Q8IZM0 81 aa2.51□□□□□ -2.01
VTI1B-203ENST00000554636 PACRGQ96M98 296 aaPredicted RBP2.51□□□□□ -2.01
VTI1B-203ENST00000554636 SCGB3A1Q96QR1 104 aa2.51□□□□□ -2.01
VTI1B-203ENST00000554636 TOMM7Q9P0U1 55 aa2.51□□□□□ -2.01
VTI1B-203ENST00000554636 CDKN2A-AS1Q9UH64 79 aa2.51□□□□□ -2.01
VTI1B-203ENST00000554636 LPAP08519 4548 aa2.5□□□□□ -2.01
VTI1B-203ENST00000554636 TINCRA0A1B0GVN0 87 aa2.5□□□□□ -2.01
VTI1B-203ENST00000554636 A8MU10 97 aa2.5□□□□□ -2.01
VTI1B-203ENST00000554636 IGLV7-43P04211 117 aa2.5□□□□□ -2.01
VTI1B-203ENST00000554636 CXCL5P42830 114 aa2.5□□□□□ -2.01
VTI1B-203ENST00000554636 FABP9Q0Z7S8 132 aa2.5□□□□□ -2.01
VTI1B-203ENST00000554636 PMVKQ15126 192 aa2.5□□□□□ -2.01
VTI1B-203ENST00000554636 REG3GQ6UW15 175 aa2.5□□□□□ -2.01
VTI1B-203ENST00000554636 FA2HQ7L5A8 372 aa2.5□□□□□ -2.01
VTI1B-203ENST00000554636 LINC00469Q8N7U9 141 aa2.5□□□□□ -2.01
VTI1B-203ENST00000554636 C18orf32Q8TCD1 76 aa2.5□□□□□ -2.01
VTI1B-203ENST00000554636 YPEL4Q96NS1 127 aa2.5□□□□□ -2.01
VTI1B-203ENST00000554636 CST9LQ9H4G1 147 aa2.5□□□□□ -2.01
VTI1B-203ENST00000554636 GEMIN7Q9H840 131 aaKnown RBP2.5□□□□□ -2.01
VTI1B-203ENST00000554636 LINC01549A6NIU2 74 aa2.49□□□□□ -2.01
VTI1B-203ENST00000554636 F8VRH5 84 aa2.49□□□□□ -2.01
VTI1B-203ENST00000554636 H0Y9J4 135 aa2.49□□□□□ -2.01
VTI1B-203ENST00000554636 APOC3P02656 99 aa2.49□□□□□ -2.01
VTI1B-203ENST00000554636 KRTAP1-4P0C5Y4 121 aa2.49□□□□□ -2.01
VTI1B-203ENST00000554636 SPINK8P0C7L1 97 aa2.49□□□□□ -2.01
VTI1B-203ENST00000554636 IGLC3P0DOY3 106 aa2.49□□□□□ -2.01
VTI1B-203ENST00000554636 CKS1BP61024 79 aa2.49□□□□□ -2.01
VTI1B-203ENST00000554636 PDZD11Q5EBL8 140 aa2.49□□□□□ -2.01
VTI1B-203ENST00000554636 TYMSOSQ8TAI1 123 aa2.49□□□□□ -2.01
VTI1B-203ENST00000554636 COX7B2Q8TF08 81 aa2.49□□□□□ -2.01
VTI1B-203ENST00000554636 XAGE1AQ9HD64 81 aa2.49□□□□□ -2.01
VTI1B-203ENST00000554636 SMCO4Q9NRQ5 59 aa2.49□□□□□ -2.01
VTI1B-203ENST00000554636 TRAPPC1Q9Y5R8 145 aa2.49□□□□□ -2.01
VTI1B-203ENST00000554636 MUC17Q685J3 4493 aa2.48□□□□□ -2.01
VTI1B-203ENST00000554636 C11orf86A6NJI1 115 aa2.48□□□□□ -2.01
VTI1B-203ENST00000554636 SNAPINO95295 136 aa2.48□□□□□ -2.01
VTI1B-203ENST00000554636 HBDP02042 147 aa2.48□□□□□ -2.01
VTI1B-203ENST00000554636 ZNF22P17026 224 aaPredicted RBP2.48□□□□□ -2.01
VTI1B-203ENST00000554636 UBE2BP63146 152 aa2.48□□□□□ -2.01
VTI1B-203ENST00000554636 PMCHL1Q16048 86 aa2.48□□□□□ -2.01
VTI1B-203ENST00000554636 C6orf226Q5I0X4 101 aa2.48□□□□□ -2.01
VTI1B-203ENST00000554636 SVBPQ8N300 66 aa2.48□□□□□ -2.01
VTI1B-203ENST00000554636 DIRC1Q969H9 104 aa2.48□□□□□ -2.01
VTI1B-203ENST00000554636 TP73-AS1Q9UF72 201 aa2.48□□□□□ -2.01
VTI1B-203ENST00000554636 C22orf24Q9Y442 160 aa2.48□□□□□ -2.01
VTI1B-203ENST00000554636 H3BRM9 83 aa2.47□□□□□ -2.01
VTI1B-203ENST00000554636 NUPR1O60356 82 aa2.47□□□□□ -2.01
VTI1B-203ENST00000554636 ATP5LO75964 103 aa2.47□□□□□ -2.01
VTI1B-203ENST00000554636 LINC00614P0C842 121 aa2.47□□□□□ -2.01
VTI1B-203ENST00000554636 CTAG1AP78358 180 aa2.47□□□□□ -2.01
VTI1B-203ENST00000554636 NDUFA5Q16718 116 aa2.47□□□□□ -2.01
VTI1B-203ENST00000554636 MRPL55Q7Z7F7 128 aaKnown RBP2.47□□□□□ -2.01
VTI1B-203ENST00000554636 IGLV1-50A0A075B6I6 118 aa2.46□□□□□ -2.02
VTI1B-203ENST00000554636 ZNF861PO60384 105 aa2.46□□□□□ -2.02
VTI1B-203ENST00000554636 NDUFV3P56181 108 aaKnown RBP2.46□□□□□ -2.02
VTI1B-203ENST00000554636 NDUFA6P56556 154 aa2.46□□□□□ -2.02
VTI1B-203ENST00000554636 RAB5BP61020 215 aa2.46□□□□□ -2.02
VTI1B-203ENST00000554636 LBHQ53QV2 105 aaPredicted RBP2.46□□□□□ -2.02
VTI1B-203ENST00000554636 KRTAP13-1Q8IUC0 172 aa2.46□□□□□ -2.02
VTI1B-203ENST00000554636 CBLN2Q8IUK8 224 aa2.46□□□□□ -2.02
VTI1B-203ENST00000554636 CHCHD1Q96BP2 118 aaKnown RBP2.46□□□□□ -2.02
VTI1B-203ENST00000554636 LINC00167Q96N53 147 aa2.46□□□□□ -2.02
VTI1B-203ENST00000554636 OBSCNQ5VST9 7968 aa2.45□□□□□ -2.02
VTI1B-203ENST00000554636 TRAV12-1A0A0B4J245 112 aa2.45□□□□□ -2.02
VTI1B-203ENST00000554636 TMEM223A0PJW6 202 aa2.45□□□□□ -2.02
VTI1B-203ENST00000554636 BCE1O60756 84 aa2.45□□□□□ -2.02
VTI1B-203ENST00000554636 SCO1O75880 301 aa2.45□□□□□ -2.02
VTI1B-203ENST00000554636 LCE3AQ5TA76 89 aa2.45□□□□□ -2.02
VTI1B-203ENST00000554636 BAGE3Q86Y29 109 aa2.45□□□□□ -2.02
VTI1B-203ENST00000554636 Q8NDZ9 215 aa2.45□□□□□ -2.02
VTI1B-203ENST00000554636 ZNF625Q96I27 306 aaPredicted RBP2.45□□□□□ -2.02
VTI1B-203ENST00000554636 ERG28Q9UKR5 140 aa2.45□□□□□ -2.02
VTI1B-203ENST00000554636 CHTOPQ9Y3Y2 248 aaKnown RBP2.45□□□□□ -2.02
VTI1B-203ENST00000554636 RPL37AP8A6NKH3 93 aa2.44□□□□□ -2.02
VTI1B-203ENST00000554636 PFN2P35080 140 aa2.44□□□□□ -2.02
VTI1B-203ENST00000554636 TMEM170BQ5T4T1 132 aa2.44□□□□□ -2.02
VTI1B-203ENST00000554636 PET117Q6UWS5 81 aa2.44□□□□□ -2.02
VTI1B-203ENST00000554636 SLC7A5P1Q8MH63 180 aa2.44□□□□□ -2.02
VTI1B-203ENST00000554636 NKAPP1Q8N9T2 125 aa2.44□□□□□ -2.02
VTI1B-203ENST00000554636 IFI27L1Q96BM0 104 aa2.44□□□□□ -2.02
VTI1B-203ENST00000554636 SND1-IT1Q9HBX3 110 aa2.44□□□□□ -2.02
VTI1B-203ENST00000554636 M0R378 163 aa2.43□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms