RNA–Protein interactions for RNA: ENST00000554429.5

PRPF39-206, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 5

Gene PRPF39, Length 2,977 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-206ENST00000554429 NDPQ00604 133 aa1.86□□□□□ -2.11
PRPF39-206ENST00000554429 WT1-ASQ06250 92 aa1.86□□□□□ -2.11
PRPF39-206ENST00000554429 PLGLAQ15195 96 aa1.86□□□□□ -2.11
PRPF39-206ENST00000554429 MRGPRG-AS1Q2M3A8 158 aa1.86□□□□□ -2.11
PRPF39-206ENST00000554429 DEFB136Q30KP8 78 aa1.86□□□□□ -2.11
PRPF39-206ENST00000554429 SCGB3A1Q96QR1 104 aa1.86□□□□□ -2.11
PRPF39-206ENST00000554429 C8orf17Q9NRJ1 99 aa1.86□□□□□ -2.11
PRPF39-206ENST00000554429 DYNC1H1Q14204 4646 aaKnown RBP1.85□□□□□ -2.11
PRPF39-206ENST00000554429 IGKV2-40A0A087WW87 121 aaPredicted RBP1.85□□□□□ -2.11
PRPF39-206ENST00000554429 IGKV2D-26A0A0A0MRZ7 120 aa1.85□□□□□ -2.11
PRPF39-206ENST00000554429 C19orf71A6NCJ1 209 aa1.85□□□□□ -2.11
PRPF39-206ENST00000554429 D6R8Y8 96 aa1.85□□□□□ -2.11
PRPF39-206ENST00000554429 IGKV2D-40P01614 121 aaPredicted RBP1.85□□□□□ -2.11
PRPF39-206ENST00000554429 IGLV2-23P01705 113 aa1.85□□□□□ -2.11
PRPF39-206ENST00000554429 TRGV3P03979 118 aa1.85□□□□□ -2.11
PRPF39-206ENST00000554429 XCL1P47992 114 aa1.85□□□□□ -2.11
PRPF39-206ENST00000554429 SYCNQ0VAF6 134 aa1.85□□□□□ -2.11
PRPF39-206ENST00000554429 MRPL51Q4U2R6 128 aaKnown RBP1.85□□□□□ -2.11
PRPF39-206ENST00000554429 C10orf113Q5VZT2 155 aa1.85□□□□□ -2.11
PRPF39-206ENST00000554429 C20orf197Q8N268 126 aa1.85□□□□□ -2.11
PRPF39-206ENST00000554429 CSNK1G2-AS1Q8NCQ2 148 aa1.85□□□□□ -2.11
PRPF39-206ENST00000554429 TXNDC17Q9BRA2 123 aa1.85□□□□□ -2.11
PRPF39-206ENST00000554429 TENM2Q9NT68 2774 aa1.85□□□□□ -2.11
PRPF39-206ENST00000554429 A0A1B0GVY2 172 aa1.85□□□□□ -2.11
PRPF39-206ENST00000554429 SLC25A20O43772 301 aa1.85□□□□□ -2.11
PRPF39-206ENST00000554429 IL4P05112 153 aa1.85□□□□□ -2.11
PRPF39-206ENST00000554429 PRSS2P07478 247 aa1.85□□□□□ -2.11
PRPF39-206ENST00000554429 ESRGQ1W209 222 aa1.85□□□□□ -2.11
PRPF39-206ENST00000554429 TMEM170BQ5T4T1 132 aa1.85□□□□□ -2.11
PRPF39-206ENST00000554429 LINC00643Q86TS7 51 aa1.85□□□□□ -2.11
PRPF39-206ENST00000554429 FRAS1Q86XX4 4008 aa1.85□□□□□ -2.11
PRPF39-206ENST00000554429 IGHV3-64A0A075B6Q5 118 aa1.84□□□□□ -2.11
PRPF39-206ENST00000554429 IGHV4-4A0A075B6R2 117 aa1.84□□□□□ -2.11
PRPF39-206ENST00000554429 C16orf90A8MZG2 172 aa1.84□□□□□ -2.11
PRPF39-206ENST00000554429 G3V318 75 aa1.84□□□□□ -2.11
PRPF39-206ENST00000554429 GNRH2O43555 120 aa1.84□□□□□ -2.11
PRPF39-206ENST00000554429 DEFB114Q30KQ6 69 aa1.84□□□□□ -2.11
PRPF39-206ENST00000554429 C20orf203Q8NBC4 194 aa1.84□□□□□ -2.11
PRPF39-206ENST00000554429 ZNF414Q96IQ9 312 aa1.84□□□□□ -2.11
PRPF39-206ENST00000554429 FAM167A-AS1Q96KT0 104 aa1.84□□□□□ -2.11
PRPF39-206ENST00000554429 OCR1Q9BZK8 76 aa1.84□□□□□ -2.11
PRPF39-206ENST00000554429 TIMM9Q9Y5J7 89 aa1.84□□□□□ -2.11
PRPF39-206ENST00000554429 IGHV3-16A0A0C4DH30 117 aa1.84□□□□□ -2.12
PRPF39-206ENST00000554429 H3BMM0 161 aa1.84□□□□□ -2.12
PRPF39-206ENST00000554429 P0C879 139 aa1.84□□□□□ -2.12
PRPF39-206ENST00000554429 RPL27AP46776 148 aaKnown RBP1.84□□□□□ -2.12
PRPF39-206ENST00000554429 RPL28P46779 137 aaKnown RBP1.84□□□□□ -2.12
PRPF39-206ENST00000554429 KRTAP10-6P60371 365 aaPredicted RBP1.84□□□□□ -2.12
PRPF39-206ENST00000554429 Q1T7F1 81 aa1.84□□□□□ -2.12
PRPF39-206ENST00000554429 UBE2WQ96B02 151 aa1.84□□□□□ -2.12
PRPF39-206ENST00000554429 MRPL35Q9NZE8 188 aaKnown RBP1.84□□□□□ -2.12
PRPF39-206ENST00000554429 DNAH11Q96DT5 4516 aa1.84□□□□□ -2.12
PRPF39-206ENST00000554429 TEX49A0A1B0GTD5 131 aa1.83□□□□□ -2.12
PRPF39-206ENST00000554429 SMIM27A0A1W2PRY6 76 aa1.83□□□□□ -2.12
PRPF39-206ENST00000554429 KRTAP23-1A1A580 65 aa1.83□□□□□ -2.12
PRPF39-206ENST00000554429 HCG22E2RYF7 251 aa1.83□□□□□ -2.12
PRPF39-206ENST00000554429 ZNF22P17026 224 aaPredicted RBP1.83□□□□□ -2.12
PRPF39-206ENST00000554429 C1orf134Q5TEV5 83 aa1.83□□□□□ -2.12
PRPF39-206ENST00000554429 LYZL1Q6UWQ5 148 aa1.83□□□□□ -2.12
PRPF39-206ENST00000554429 Q8N814 137 aa1.83□□□□□ -2.12
PRPF39-206ENST00000554429 FAM104AQ969W3 186 aa1.83□□□□□ -2.12
PRPF39-206ENST00000554429 RMI2Q96E14 147 aa1.83□□□□□ -2.12
PRPF39-206ENST00000554429 KRTAP4-4Q9BYR3 166 aa1.83□□□□□ -2.12
PRPF39-206ENST00000554429 RPP21Q9H633 154 aaKnown RBP1.83□□□□□ -2.12
PRPF39-206ENST00000554429 TMEM167BQ9NRX6 74 aa1.83□□□□□ -2.12
PRPF39-206ENST00000554429 FAT2Q9NYQ8 4349 aa1.83□□□□□ -2.12
PRPF39-206ENST00000554429 DNAH2Q9P225 4427 aa1.83□□□□□ -2.12
PRPF39-206ENST00000554429 TRBV7-1A0A0A6YYK4 115 aa1.83□□□□□ -2.12
PRPF39-206ENST00000554429 TRAV13-2A0A0B4J235 113 aa1.83□□□□□ -2.12
PRPF39-206ENST00000554429 A8MWP4 228 aa1.83□□□□□ -2.12
PRPF39-206ENST00000554429 F8WEM9 126 aa1.83□□□□□ -2.12
PRPF39-206ENST00000554429 NPYP01303 97 aa1.83□□□□□ -2.12
PRPF39-206ENST00000554429 ACYP1P07311 99 aa1.83□□□□□ -2.12
PRPF39-206ENST00000554429 HTN1P15515 57 aa1.83□□□□□ -2.12
PRPF39-206ENST00000554429 ERHP84090 104 aaKnown RBP1.83□□□□□ -2.12
PRPF39-206ENST00000554429 EIF4EBP1Q13541 118 aaPredicted RBP1.83□□□□□ -2.12
PRPF39-206ENST00000554429 Q8N1X5 172 aa1.83□□□□□ -2.12
PRPF39-206ENST00000554429 ZFAND2AQ8N6M9 145 aa1.83□□□□□ -2.12
PRPF39-206ENST00000554429 IGKV1D-37A0A075B6S9 117 aa1.83□□□□□ -2.12
PRPF39-206ENST00000554429 IGKV3-20P01619 116 aa1.83□□□□□ -2.12
PRPF39-206ENST00000554429 CRPP02741 224 aa1.83□□□□□ -2.12
PRPF39-206ENST00000554429 CRIP1P50238 77 aa1.83□□□□□ -2.12
PRPF39-206ENST00000554429 TMEM14BQ9NUH8 114 aa1.83□□□□□ -2.12
PRPF39-206ENST00000554429 A0A096LNJ9 63 aa1.82□□□□□ -2.12
PRPF39-206ENST00000554429 PRAC2D3DTV9 90 aa1.82□□□□□ -2.12
PRPF39-206ENST00000554429 KRTAP4-16G5E9R7 235 aaPredicted RBP1.82□□□□□ -2.12
PRPF39-206ENST00000554429 PRCDQ00LT1 54 aa1.82□□□□□ -2.12
PRPF39-206ENST00000554429 KRTAP20-1Q3LI63 56 aa1.82□□□□□ -2.12
PRPF39-206ENST00000554429 C1orf64Q8NEQ6 169 aa1.82□□□□□ -2.12
PRPF39-206ENST00000554429 DYNLRB2Q8TF09 96 aa1.82□□□□□ -2.12
PRPF39-206ENST00000554429 TMEM141Q96I45 108 aa1.82□□□□□ -2.12
PRPF39-206ENST00000554429 IGLV5-39A0A0G2JS06 123 aa1.82□□□□□ -2.12
PRPF39-206ENST00000554429 MYMXA0A1B0GTQ4 84 aa1.82□□□□□ -2.12
PRPF39-206ENST00000554429 A0A1B0GUT8 65 aa1.82□□□□□ -2.12
PRPF39-206ENST00000554429 TMEM223A0PJW6 202 aa1.82□□□□□ -2.12
PRPF39-206ENST00000554429 APLNQ9ULZ1 77 aa1.82□□□□□ -2.12
PRPF39-206ENST00000554429 IGLV4-3A0A075B6K6 122 aa1.81□□□□□ -2.12
PRPF39-206ENST00000554429 IGHV3-11P01762 117 aa1.81□□□□□ -2.12
PRPF39-206ENST00000554429 UBE2D3P61077 147 aa1.81□□□□□ -2.12
PRPF39-206ENST00000554429 UBE2D2P62837 147 aa1.81□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 88 ms