RNA–Protein interactions for RNA: ENST00000554302.1

RCCD1-202, Transcript of RCC1 domain containing 1, humanhuman

TSL 3

Gene RCCD1, Length 986 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCCD1-202ENST00000554302 NDUFA6P56556 154 aa12.71□□□□□ -0.37
RCCD1-202ENST00000554302 HBDP02042 147 aa12.7□□□□□ -0.38
RCCD1-202ENST00000554302 PRLHP81277 87 aa12.7□□□□□ -0.38
RCCD1-202ENST00000554302 COMMD7Q86VX2 200 aa12.7□□□□□ -0.38
RCCD1-202ENST00000554302 Q8NDZ9 215 aa12.7□□□□□ -0.38
RCCD1-202ENST00000554302 RPS10P5Q9NQ39 176 aa12.7□□□□□ -0.38
RCCD1-202ENST00000554302 TMEM238C9JI98 176 aa12.69□□□□□ -0.38
RCCD1-202ENST00000554302 RPL24P83731 157 aaKnown RBP12.69□□□□□ -0.38
RCCD1-202ENST00000554302 LINC00304Q8N9R0 145 aa12.69□□□□□ -0.38
RCCD1-202ENST00000554302 C11orf86A6NJI1 115 aa12.68□□□□□ -0.38
RCCD1-202ENST00000554302 M0R378 163 aa12.68□□□□□ -0.38
RCCD1-202ENST00000554302 CTAG1AP78358 180 aa12.67□□□□□ -0.38
RCCD1-202ENST00000554302 SFTA2Q6UW10 78 aa12.67□□□□□ -0.38
RCCD1-202ENST00000554302 FAM19A1Q7Z5A9 133 aa12.67□□□□□ -0.38
RCCD1-202ENST00000554302 ZNF625Q96I27 306 aaPredicted RBP12.67□□□□□ -0.38
RCCD1-202ENST00000554302 TRAPPC1Q9Y5R8 145 aa12.67□□□□□ -0.38
RCCD1-202ENST00000554302 PMCHL1Q16048 86 aa12.66□□□□□ -0.38
RCCD1-202ENST00000554302 XP32Q5T750 250 aa12.66□□□□□ -0.38
RCCD1-202ENST00000554302 MUC17Q685J3 4493 aa12.66□□□□□ -0.38
RCCD1-202ENST00000554302 IGKV2D-26A0A0A0MRZ7 120 aa12.65□□□□□ -0.38
RCCD1-202ENST00000554302 BAGE3Q86Y29 109 aa12.65□□□□□ -0.38
RCCD1-202ENST00000554302 PLEKHB2Q96CS7 222 aa12.65□□□□□ -0.38
RCCD1-202ENST00000554302 A0A0U1RQV1 116 aa12.64□□□□□ -0.39
RCCD1-202ENST00000554302 RETNLBQ9BQ08 111 aa12.64□□□□□ -0.39
RCCD1-202ENST00000554302 TMEM170BQ5T4T1 132 aa12.63□□□□□ -0.39
RCCD1-202ENST00000554302 FAT4Q6V0I7 4981 aa12.63□□□□□ -0.39
RCCD1-202ENST00000554302 TPRXLQ17RH7 258 aa12.6□□□□□ -0.39
RCCD1-202ENST00000554302 CBLN2Q8IUK8 224 aa12.6□□□□□ -0.39
RCCD1-202ENST00000554302 CHTOPQ9Y3Y2 248 aaKnown RBP12.59□□□□□ -0.39
RCCD1-202ENST00000554302 TMEM223A0PJW6 202 aa12.57□□□□□ -0.4
RCCD1-202ENST00000554302 LINC00158P58513 81 aa12.57□□□□□ -0.4
RCCD1-202ENST00000554302 C3orf22Q8N5N4 141 aa12.57□□□□□ -0.4
RCCD1-202ENST00000554302 TRAV12-1A0A0B4J245 112 aa12.55□□□□□ -0.4
RCCD1-202ENST00000554302 SPRR4Q96PI1 79 aa12.55□□□□□ -0.4
RCCD1-202ENST00000554302 HIGD2AQ9BW72 106 aa12.55□□□□□ -0.4
RCCD1-202ENST00000554302 IGLV7-46A0A075B6I9 117 aa12.54□□□□□ -0.4
RCCD1-202ENST00000554302 A0A0U1RRA0 63 aa12.52□□□□□ -0.41
RCCD1-202ENST00000554302 LINC00310P59036 64 aa12.52□□□□□ -0.41
RCCD1-202ENST00000554302 CHCHD1Q96BP2 118 aaKnown RBP12.52□□□□□ -0.41
RCCD1-202ENST00000554302 APOC3P02656 99 aa12.51□□□□□ -0.41
RCCD1-202ENST00000554302 SPAG11AQ6PDA7 123 aa12.51□□□□□ -0.41
RCCD1-202ENST00000554302 IFI27L1Q96BM0 104 aa12.51□□□□□ -0.41
RCCD1-202ENST00000554302 YPEL4Q96NS1 127 aa12.51□□□□□ -0.41
RCCD1-202ENST00000554302 PRYO14603 147 aa12.5□□□□□ -0.41
RCCD1-202ENST00000554302 SMIM13P0DJ93 91 aa12.5□□□□□ -0.41
RCCD1-202ENST00000554302 SPRR1AP35321 89 aa12.5□□□□□ -0.41
RCCD1-202ENST00000554302 SNAPINO95295 136 aa12.49□□□□□ -0.41
RCCD1-202ENST00000554302 LINC00337Q8N6G1 96 aa12.49□□□□□ -0.41
RCCD1-202ENST00000554302 KRTAP4-16G5E9R7 235 aaPredicted RBP12.48□□□□□ -0.41
RCCD1-202ENST00000554302 SVBPQ8N300 66 aa12.48□□□□□ -0.41
RCCD1-202ENST00000554302 KCNQ1DNQ9H478 68 aa12.48□□□□□ -0.41
RCCD1-202ENST00000554302 BOD1L2Q8IYS8 172 aa12.47□□□□□ -0.41
RCCD1-202ENST00000554302 PPDPFQ9H3Y8 114 aa12.47□□□□□ -0.41
RCCD1-202ENST00000554302 ZNF706Q9Y5V0 76 aaPredicted RBP12.47□□□□□ -0.41
RCCD1-202ENST00000554302 HERV-K104P63124 156 aa12.46□□□□□ -0.41
RCCD1-202ENST00000554302 MIR7-3HGQ8N6C7 128 aa12.46□□□□□ -0.41
RCCD1-202ENST00000554302 MEIG1Q5JSS6 88 aa12.45□□□□□ -0.42
RCCD1-202ENST00000554302 ATP6V1G1O75348 118 aa12.44□□□□□ -0.42
RCCD1-202ENST00000554302 LINC00587B1AMM8 73 aa12.43□□□□□ -0.42
RCCD1-202ENST00000554302 NCR3O14931 201 aa12.43□□□□□ -0.42
RCCD1-202ENST00000554302 NDUFA5Q16718 116 aa12.43□□□□□ -0.42
RCCD1-202ENST00000554302 FP248Q71RG6 208 aaPredicted RBP12.43□□□□□ -0.42
RCCD1-202ENST00000554302 KRTAP9-2Q9BYQ4 174 aa12.43□□□□□ -0.42
RCCD1-202ENST00000554302 SMCR5Q8TEV8 140 aa12.42□□□□□ -0.42
RCCD1-202ENST00000554302 NDUFA12Q9UI09 145 aa12.42□□□□□ -0.42
RCCD1-202ENST00000554302 TRBV10-3A0A0K0K1G6 114 aa12.4□□□□□ -0.42
RCCD1-202ENST00000554302 LINC00483Q53H64 154 aa12.4□□□□□ -0.42
RCCD1-202ENST00000554302 FAM19A2Q8N3H0 131 aa12.4□□□□□ -0.42
RCCD1-202ENST00000554302 DAND5Q8N907 189 aa12.4□□□□□ -0.42
RCCD1-202ENST00000554302 Q8NBF4 154 aa12.4□□□□□ -0.42
RCCD1-202ENST00000554302 LOC107984156A0A0G2JMH3 177 aa12.39□□□□□ -0.43
RCCD1-202ENST00000554302 LOC100996750A0A140TA64 210 aa12.39□□□□□ -0.43
RCCD1-202ENST00000554302 MYMXA0A1B0GTQ4 84 aa12.39□□□□□ -0.43
RCCD1-202ENST00000554302 ARL17AQ8IVW1 177 aa12.39□□□□□ -0.43
RCCD1-202ENST00000554302 KRTAP4-6Q9BYQ5 205 aa12.39□□□□□ -0.43
RCCD1-202ENST00000554302 ETDCA0A1B0GVM5 59 aa12.38□□□□□ -0.43
RCCD1-202ENST00000554302 HSBP1O75506 76 aa12.38□□□□□ -0.43
RCCD1-202ENST00000554302 TSPEAR-AS2P59090 65 aa12.37□□□□□ -0.43
RCCD1-202ENST00000554302 MAP1LC3CQ9BXW4 147 aa12.37□□□□□ -0.43
RCCD1-202ENST00000554302 C9orf118A6NHY6 69 aa12.36□□□□□ -0.43
RCCD1-202ENST00000554302 SPINK1P00995 79 aa12.36□□□□□ -0.43
RCCD1-202ENST00000554302 B5MCH6 92 aa12.35□□□□□ -0.43
RCCD1-202ENST00000554302 KRTAP13-3Q3SY46 172 aa12.35□□□□□ -0.43
RCCD1-202ENST00000554302 TRBV10-2A0A0K0K1G8 114 aa12.33□□□□□ -0.44
RCCD1-202ENST00000554302 LEPROTO15243 131 aa12.33□□□□□ -0.44
RCCD1-202ENST00000554302 ERC2-IT1O76042 136 aa12.32□□□□□ -0.44
RCCD1-202ENST00000554302 S100A12P80511 92 aa12.31□□□□□ -0.44
RCCD1-202ENST00000554302 H0Y8G0 127 aa12.3□□□□□ -0.44
RCCD1-202ENST00000554302 LEPROTL1O95214 131 aa12.3□□□□□ -0.44
RCCD1-202ENST00000554302 DDTP30046 118 aa12.3□□□□□ -0.44
RCCD1-202ENST00000554302 GAGE2AQ6NT46 116 aa12.3□□□□□ -0.44
RCCD1-202ENST00000554302 Q9BRP9 147 aa12.3□□□□□ -0.44
RCCD1-202ENST00000554302 TRGC2P03986 189 aa12.29□□□□□ -0.44
RCCD1-202ENST00000554302 PLNP26678 52 aa12.29□□□□□ -0.44
RCCD1-202ENST00000554302 RPS29P62273 56 aaKnown RBP12.29□□□□□ -0.44
RCCD1-202ENST00000554302 J3QQQ9 107 aa12.28□□□□□ -0.44
RCCD1-202ENST00000554302 ASB16-AS1Q495Z4 193 aa12.28□□□□□ -0.44
RCCD1-202ENST00000554302 SSBP3-AS1Q7Z2R9 100 aa12.28□□□□□ -0.44
RCCD1-202ENST00000554302 SERF1AO75920 110 aa12.27□□□□□ -0.45
RCCD1-202ENST00000554302 Q6ZRX8 168 aa12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms