RNA–Protein interactions for RNA: ENST00000553683.1

VRK1-202, Transcript of vaccinia related kinase 1, humanhuman

TSL 3

Gene VRK1, Length 247 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-202ENST00000553683 K7EMI3 77 aa1.08□□□□□ -2.24
VRK1-202ENST00000553683 IGHV3-33P01772 117 aa1.08□□□□□ -2.24
VRK1-202ENST00000553683 TFF1P04155 84 aa1.08□□□□□ -2.24
VRK1-202ENST00000553683 PRB4P10163 310 aaPredicted RBP1.08□□□□□ -2.24
VRK1-202ENST00000553683 SPINT3P49223 89 aa1.08□□□□□ -2.24
VRK1-202ENST00000553683 EDDM3BP56851 147 aa1.08□□□□□ -2.24
VRK1-202ENST00000553683 MIR22HGQ0VDD5 57 aa1.08□□□□□ -2.24
VRK1-202ENST00000553683 KRTAP25-1Q3LHN0 102 aa1.08□□□□□ -2.24
VRK1-202ENST00000553683 FAM27BQ5VT28 67 aa1.08□□□□□ -2.24
VRK1-202ENST00000553683 ATP5EP2Q5VTU8 51 aa1.08□□□□□ -2.24
VRK1-202ENST00000553683 C2orf82Q6UX34 121 aa1.08□□□□□ -2.24
VRK1-202ENST00000553683 HIGD2AQ9BW72 106 aa1.08□□□□□ -2.24
VRK1-202ENST00000553683 PLAC8Q9NZF1 115 aa1.08□□□□□ -2.24
VRK1-202ENST00000553683 C22orf24Q9Y442 160 aa1.08□□□□□ -2.24
VRK1-202ENST00000553683 V9GYV3 84 aa1.08□□□□□ -2.24
VRK1-202ENST00000553683 C4AP0C0L4 1744 aa1.08□□□□□ -2.24
VRK1-202ENST00000553683 SCN9AQ15858 1988 aa1.08□□□□□ -2.24
VRK1-202ENST00000553683 ARFGEF2Q9Y6D5 1785 aa1.08□□□□□ -2.24
VRK1-202ENST00000553683 PATJQ8NI35 1801 aa1.08□□□□□ -2.24
VRK1-202ENST00000553683 EIF2AK4Q9P2K8 1649 aaKnown RBP1.07□□□□□ -2.24
VRK1-202ENST00000553683 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP1.07□□□□□ -2.24
VRK1-202ENST00000553683 CSPG4Q6UVK1 2322 aa1.07□□□□□ -2.24
VRK1-202ENST00000553683 C5P01031 1676 aa1.07□□□□□ -2.24
VRK1-202ENST00000553683 SCN7AQ01118 1682 aa1.07□□□□□ -2.24
VRK1-202ENST00000553683 MYLKQ15746 1914 aa1.07□□□□□ -2.24
VRK1-202ENST00000553683 PLXNB3Q9ULL4 1909 aa1.07□□□□□ -2.24
VRK1-202ENST00000553683 LY75O60449 1722 aa1.07□□□□□ -2.24
VRK1-202ENST00000553683 EML6Q6ZMW3 1958 aa1.07□□□□□ -2.24
VRK1-202ENST00000553683 ANK2Q01484 3957 aa1.07□□□□□ -2.24
VRK1-202ENST00000553683 MICAL3Q7RTP6 2002 aa1.07□□□□□ -2.24
VRK1-202ENST00000553683 SIPA1L3O60292 1781 aaPredicted RBP1.07□□□□□ -2.24
VRK1-202ENST00000553683 A0A087WVE0 104 aa1.07□□□□□ -2.24
VRK1-202ENST00000553683 C11orf86A6NJI1 115 aa1.07□□□□□ -2.24
VRK1-202ENST00000553683 ZNF815PA8K554 130 aa1.07□□□□□ -2.24
VRK1-202ENST00000553683 H7C2G1 150 aa1.07□□□□□ -2.24
VRK1-202ENST00000553683 COX6CP09669 75 aa1.07□□□□□ -2.24
VRK1-202ENST00000553683 MGST1P10620 155 aaKnown RBP1.07□□□□□ -2.24
VRK1-202ENST00000553683 CNBPP62633 177 aaKnown RBP1.07□□□□□ -2.24
VRK1-202ENST00000553683 SERF2P84101 59 aa1.07□□□□□ -2.24
VRK1-202ENST00000553683 C10orf128Q5T292 105 aa1.07□□□□□ -2.24
VRK1-202ENST00000553683 CSAG1Q6PB30 78 aa1.07□□□□□ -2.24
VRK1-202ENST00000553683 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP1.07□□□□□ -2.24
VRK1-202ENST00000553683 Q8NAQ8 132 aa1.07□□□□□ -2.24
VRK1-202ENST00000553683 Q8TAT8 98 aa1.07□□□□□ -2.24
VRK1-202ENST00000553683 OBSCN-AS1Q96MR7 158 aa1.07□□□□□ -2.24
VRK1-202ENST00000553683 TXNDC17Q9BRA2 123 aa1.07□□□□□ -2.24
VRK1-202ENST00000553683 C14orf132Q9NPU4 83 aa1.07□□□□□ -2.24
VRK1-202ENST00000553683 NDUFA4L2Q9NRX3 87 aa1.07□□□□□ -2.24
VRK1-202ENST00000553683 SNURFQ9Y675 71 aa1.07□□□□□ -2.24
VRK1-202ENST00000553683 TSC2P49815 1807 aa1.07□□□□□ -2.24
VRK1-202ENST00000553683 SPTBN1Q01082 2364 aaKnown RBP1.07□□□□□ -2.24
VRK1-202ENST00000553683 WNK1Q9H4A3 2382 aa1.07□□□□□ -2.24
VRK1-202ENST00000553683 MYH8P13535 1937 aa1.07□□□□□ -2.24
VRK1-202ENST00000553683 COL6A6A6NMZ7 2263 aa1.06□□□□□ -2.24
VRK1-202ENST00000553683 AHCTF1Q8WYP5 2266 aa1.06□□□□□ -2.24
VRK1-202ENST00000553683 DSCAMO60469 2012 aa1.06□□□□□ -2.24
VRK1-202ENST00000553683 IGKV1D-42A0A075B6H8 117 aa1.06□□□□□ -2.24
VRK1-202ENST00000553683 TRAV12-3A0A0B4J271 114 aa1.06□□□□□ -2.24
VRK1-202ENST00000553683 IGHV1-18A0A0C4DH31 117 aa1.06□□□□□ -2.24
VRK1-202ENST00000553683 IGKV3D-7A0A0C4DH55 119 aa1.06□□□□□ -2.24
VRK1-202ENST00000553683 LINC01546A6NGU7 62 aa1.06□□□□□ -2.24
VRK1-202ENST00000553683 ODF3BA8MYP8 253 aa1.06□□□□□ -2.24
VRK1-202ENST00000553683 H3BPC8 53 aa1.06□□□□□ -2.24
VRK1-202ENST00000553683 HMGN4O00479 90 aa1.06□□□□□ -2.24
VRK1-202ENST00000553683 ARMS2P0C7Q2 107 aa1.06□□□□□ -2.24
VRK1-202ENST00000553683 SAA2P0DJI9 122 aaPredicted RBP1.06□□□□□ -2.24
VRK1-202ENST00000553683 ARL14EPLP0DKL9 152 aa1.06□□□□□ -2.24
VRK1-202ENST00000553683 DEFB113Q30KQ7 82 aa1.06□□□□□ -2.24
VRK1-202ENST00000553683 CASC2Q6XLA1 102 aa1.06□□□□□ -2.24
VRK1-202ENST00000553683 LYPD6Q86Y78 171 aa1.06□□□□□ -2.24
VRK1-202ENST00000553683 TMEM254Q8TBM7 123 aa1.06□□□□□ -2.24
VRK1-202ENST00000553683 TMEM263Q8WUH6 116 aaKnown RBP1.06□□□□□ -2.24
VRK1-202ENST00000553683 ICOSQ9Y6W8 199 aa1.06□□□□□ -2.24
VRK1-202ENST00000553683 TACC2O95359 2948 aa1.06□□□□□ -2.24
VRK1-202ENST00000553683 FSIP2Q5CZC0 6907 aa1.06□□□□□ -2.24
VRK1-202ENST00000553683 LRRC37AA6NMS7 1700 aa1.06□□□□□ -2.24
VRK1-202ENST00000553683 DDX60LQ5H9U9 1706 aaKnown RBP1.06□□□□□ -2.24
VRK1-202ENST00000553683 UBR3Q6ZT12 1888 aa1.05□□□□□ -2.24
VRK1-202ENST00000553683 MIA3Q5JRA6 1907 aa1.05□□□□□ -2.24
VRK1-202ENST00000553683 HEATR5AQ86XA9 2040 aa1.05□□□□□ -2.24
VRK1-202ENST00000553683 ZNF831Q5JPB2 1677 aa1.05□□□□□ -2.24
VRK1-202ENST00000553683 TRAV23DV6A0A075B6W5 121 aa1.05□□□□□ -2.24
VRK1-202ENST00000553683 TRAV10A0A0B4J240 114 aa1.05□□□□□ -2.24
VRK1-202ENST00000553683 LCE6AA0A183 80 aa1.05□□□□□ -2.24
VRK1-202ENST00000553683 D6R8Y8 96 aa1.05□□□□□ -2.24
VRK1-202ENST00000553683 PIN1P1O15428 100 aa1.05□□□□□ -2.24
VRK1-202ENST00000553683 IGHV3-30P01768 117 aa1.05□□□□□ -2.24
VRK1-202ENST00000553683 CTSGP08311 255 aa1.05□□□□□ -2.24
VRK1-202ENST00000553683 IGHV3-30-5P0DP03 117 aa1.05□□□□□ -2.24
VRK1-202ENST00000553683 COX6B1P14854 86 aa1.05□□□□□ -2.24
VRK1-202ENST00000553683 ELOF1P60002 83 aaKnown RBP1.05□□□□□ -2.24
VRK1-202ENST00000553683 DEFB103AP81534 67 aa1.05□□□□□ -2.24
VRK1-202ENST00000553683 PCOTHQ58A44 107 aa1.05□□□□□ -2.24
VRK1-202ENST00000553683 KIAA2026Q5HYC2 2103 aa1.05□□□□□ -2.24
VRK1-202ENST00000553683 MED12LQ86YW9 2145 aa1.05□□□□□ -2.24
VRK1-202ENST00000553683 MUSTN1Q8IVN3 82 aa1.05□□□□□ -2.24
VRK1-202ENST00000553683 C9orf163Q8N9P6 203 aa1.05□□□□□ -2.24
VRK1-202ENST00000553683 LINC00846Q9NV44 126 aa1.05□□□□□ -2.24
VRK1-202ENST00000553683 TIMM9Q9Y5J7 89 aa1.05□□□□□ -2.24
VRK1-202ENST00000553683 MAST2Q6P0Q8 1798 aa1.05□□□□□ -2.24
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms