RNA–Protein interactions for RNA: ENST00000553649.2

SMARCE1P3-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1 pseudogene 3, humanhuman

BASIC

Gene SMARCE1P3, Length 1,231 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1P3-201ENST00000553649 TWIST1Q15672 202 aa3.61□□□□□ -1.83
SMARCE1P3-201ENST00000553649 ZNF876PQ49A33 203 aa3.61□□□□□ -1.83
SMARCE1P3-201ENST00000553649 PRR15Q8IV56 129 aa3.61□□□□□ -1.83
SMARCE1P3-201ENST00000553649 FAM19A2Q8N3H0 131 aa3.61□□□□□ -1.83
SMARCE1P3-201ENST00000553649 FXYD5Q96DB9 178 aa3.61□□□□□ -1.83
SMARCE1P3-201ENST00000553649 NPCDR1Q9BY65 106 aa3.61□□□□□ -1.83
SMARCE1P3-201ENST00000553649 TRAV21A0A0B4J279 112 aa3.6□□□□□ -1.83
SMARCE1P3-201ENST00000553649 TRBV7-6A0A0J9YX20 115 aa3.6□□□□□ -1.83
SMARCE1P3-201ENST00000553649 H3BT86 120 aa3.6□□□□□ -1.83
SMARCE1P3-201ENST00000553649 RPL18AQ02543 176 aaKnown RBP3.6□□□□□ -1.83
SMARCE1P3-201ENST00000553649 TMEM170BQ5T4T1 132 aa3.6□□□□□ -1.83
SMARCE1P3-201ENST00000553649 TMEM252Q8N6L7 170 aa3.6□□□□□ -1.83
SMARCE1P3-201ENST00000553649 UBE2WQ96B02 151 aa3.6□□□□□ -1.83
SMARCE1P3-201ENST00000553649 RMI2Q96E14 147 aa3.6□□□□□ -1.83
SMARCE1P3-201ENST00000553649 C11orf1Q9H5F2 150 aa3.6□□□□□ -1.83
SMARCE1P3-201ENST00000553649 OSTCQ9NRP0 149 aa3.6□□□□□ -1.83
SMARCE1P3-201ENST00000553649 TRAV8-1A0A0A6YYK1 113 aa3.59□□□□□ -1.83
SMARCE1P3-201ENST00000553649 TRBV6-4A0A1B0GX49 114 aa3.59□□□□□ -1.83
SMARCE1P3-201ENST00000553649 NPYP01303 97 aa3.59□□□□□ -1.83
SMARCE1P3-201ENST00000553649 KRTAP10-5P60370 271 aa3.59□□□□□ -1.83
SMARCE1P3-201ENST00000553649 SRSF9Q13242 221 aaKnown RBP eCLIP3.59□□□□□ -1.83
SMARCE1P3-201ENST00000553649 COX8CQ7Z4L0 72 aa3.59□□□□□ -1.83
SMARCE1P3-201ENST00000553649 ATP5L2Q7Z4Y8 100 aa3.59□□□□□ -1.83
SMARCE1P3-201ENST00000553649 OR5C1Q8NGR4 320 aa3.59□□□□□ -1.83
SMARCE1P3-201ENST00000553649 BRK1Q8WUW1 75 aa3.59□□□□□ -1.83
SMARCE1P3-201ENST00000553649 DPH3P1Q9H4G8 78 aa3.59□□□□□ -1.83
SMARCE1P3-201ENST00000553649 OTORQ9NRC9 128 aa3.59□□□□□ -1.83
SMARCE1P3-201ENST00000553649 NHP2Q9NX24 153 aaKnown RBP3.59□□□□□ -1.83
SMARCE1P3-201ENST00000553649 KLK12Q9UKR0 248 aa3.59□□□□□ -1.83
SMARCE1P3-201ENST00000553649 IGLV5-37A0A075B6J1 123 aa3.58□□□□□ -1.84
SMARCE1P3-201ENST00000553649 MYMXA0A1B0GTQ4 84 aa3.58□□□□□ -1.84
SMARCE1P3-201ENST00000553649 PGPA6NDG6 321 aa3.58□□□□□ -1.84
SMARCE1P3-201ENST00000553649 MGST1P10620 155 aaKnown RBP3.58□□□□□ -1.84
SMARCE1P3-201ENST00000553649 GCHFRP30047 84 aa3.58□□□□□ -1.84
SMARCE1P3-201ENST00000553649 ATP5EP56381 51 aaPredicted RBP3.58□□□□□ -1.84
SMARCE1P3-201ENST00000553649 LINC00643Q86TS7 51 aa3.58□□□□□ -1.84
SMARCE1P3-201ENST00000553649 SERP2Q8N6R1 65 aa3.58□□□□□ -1.84
SMARCE1P3-201ENST00000553649 PRR26Q8N8Z3 221 aa3.58□□□□□ -1.84
SMARCE1P3-201ENST00000553649 TMEM75Q8N9X5 138 aa3.58□□□□□ -1.84
SMARCE1P3-201ENST00000553649 C2orf48Q96LS8 159 aa3.58□□□□□ -1.84
SMARCE1P3-201ENST00000553649 SMIM27A0A1W2PRY6 76 aa3.57□□□□□ -1.84
SMARCE1P3-201ENST00000553649 TCL1BO95988 128 aa3.57□□□□□ -1.84
SMARCE1P3-201ENST00000553649 FXYD2P54710 66 aa3.57□□□□□ -1.84
SMARCE1P3-201ENST00000553649 UBE2D3P61077 147 aa3.57□□□□□ -1.84
SMARCE1P3-201ENST00000553649 UBE2D2P62837 147 aa3.57□□□□□ -1.84
SMARCE1P3-201ENST00000553649 LINC01561Q8N1V8 128 aa3.57□□□□□ -1.84
SMARCE1P3-201ENST00000553649 C14orf178Q8N769 122 aaPredicted RBP3.57□□□□□ -1.84
SMARCE1P3-201ENST00000553649 NEXN-AS1Q8NBZ9 246 aa3.57□□□□□ -1.84
SMARCE1P3-201ENST00000553649 NXT2Q9NPJ8 142 aaKnown RBP3.57□□□□□ -1.84
SMARCE1P3-201ENST00000553649 EPDR1Q9UM22 224 aa3.57□□□□□ -1.84
SMARCE1P3-201ENST00000553649 LENEPQ9Y5L5 61 aa3.57□□□□□ -1.84
SMARCE1P3-201ENST00000553649 IGLV5-45A0A087WSX0 123 aa3.56□□□□□ -1.84
SMARCE1P3-201ENST00000553649 IGHV1-58A0A0C4DH39 117 aa3.56□□□□□ -1.84
SMARCE1P3-201ENST00000553649 S100A4P26447 101 aaKnown RBP3.56□□□□□ -1.84
SMARCE1P3-201ENST00000553649 PSMB2P49721 201 aa3.56□□□□□ -1.84
SMARCE1P3-201ENST00000553649 ZNF80P51504 273 aaPredicted RBP3.56□□□□□ -1.84
SMARCE1P3-201ENST00000553649 HIST1H4AP62805 103 aaKnown RBP3.56□□□□□ -1.84
SMARCE1P3-201ENST00000553649 ZNF726P1Q15940 193 aa3.56□□□□□ -1.84
SMARCE1P3-201ENST00000553649 C14orf177Q52M58 125 aa3.56□□□□□ -1.84
SMARCE1P3-201ENST00000553649 FAM74A4Q5TZK3 123 aa3.56□□□□□ -1.84
SMARCE1P3-201ENST00000553649 C5orf38Q86SI9 138 aa3.56□□□□□ -1.84
SMARCE1P3-201ENST00000553649 IFI27L1Q96BM0 104 aa3.56□□□□□ -1.84
SMARCE1P3-201ENST00000553649 V9GYV3 84 aa3.56□□□□□ -1.84
SMARCE1P3-201ENST00000553649 hADV29S1A0JD25 119 aa3.55□□□□□ -1.84
SMARCE1P3-201ENST00000553649 PANO1I0J062 215 aa3.55□□□□□ -1.84
SMARCE1P3-201ENST00000553649 SLC25A20O43772 301 aa3.55□□□□□ -1.84
SMARCE1P3-201ENST00000553649 NDUFS5O43920 106 aa3.55□□□□□ -1.84
SMARCE1P3-201ENST00000553649 CRPP02741 224 aa3.55□□□□□ -1.84
SMARCE1P3-201ENST00000553649 RNASE3P12724 160 aaKnown RBP3.55□□□□□ -1.84
SMARCE1P3-201ENST00000553649 ZNF56Q15929 161 aa3.55□□□□□ -1.84
SMARCE1P3-201ENST00000553649 ZC2HC1BQ5TFG8 222 aa3.55□□□□□ -1.84
SMARCE1P3-201ENST00000553649 SCGB1D4Q6XE38 83 aa3.55□□□□□ -1.84
SMARCE1P3-201ENST00000553649 PRNTQ86SH4 94 aa3.55□□□□□ -1.84
SMARCE1P3-201ENST00000553649 C11orf52Q96A22 123 aa3.55□□□□□ -1.84
SMARCE1P3-201ENST00000553649 DSCR8Q96T75 97 aa3.55□□□□□ -1.84
SMARCE1P3-201ENST00000553649 KRTAP9-6A8MVA2 160 aa3.54□□□□□ -1.84
SMARCE1P3-201ENST00000553649 H3BVH4 76 aa3.54□□□□□ -1.84
SMARCE1P3-201ENST00000553649 BCE1O60756 84 aa3.54□□□□□ -1.84
SMARCE1P3-201ENST00000553649 ANGP03950 147 aaKnown RBP3.54□□□□□ -1.84
SMARCE1P3-201ENST00000553649 TCRAP04437 139 aa3.54□□□□□ -1.84
SMARCE1P3-201ENST00000553649 PRSS1P07477 247 aa3.54□□□□□ -1.84
SMARCE1P3-201ENST00000553649 LGALS3P17931 250 aaKnown RBP3.54□□□□□ -1.84
SMARCE1P3-201ENST00000553649 HERVK_113P61574 105 aa3.54□□□□□ -1.84
SMARCE1P3-201ENST00000553649 CLPSL2Q6UWE3 100 aa3.54□□□□□ -1.84
SMARCE1P3-201ENST00000553649 ZFP2Q6ZN57 461 aa3.54□□□□□ -1.84
SMARCE1P3-201ENST00000553649 TRBV25-1A0A075B6N4 114 aa3.53□□□□□ -1.84
SMARCE1P3-201ENST00000553649 IGLV9-49A0A0B4J1Y8 123 aa3.53□□□□□ -1.84
SMARCE1P3-201ENST00000553649 IGKV3D-20A0A0C4DH25 116 aa3.53□□□□□ -1.84
SMARCE1P3-201ENST00000553649 SMKR1H3BMG3 65 aa3.53□□□□□ -1.84
SMARCE1P3-201ENST00000553649 K7ERJ3 54 aa3.53□□□□□ -1.84
SMARCE1P3-201ENST00000553649 HBDP02042 147 aa3.53□□□□□ -1.84
SMARCE1P3-201ENST00000553649 CHTF8P0CG12 524 aa3.53□□□□□ -1.84
SMARCE1P3-201ENST00000553649 ENHOQ6UWT2 76 aa3.53□□□□□ -1.84
SMARCE1P3-201ENST00000553649 PCP2Q8IVA1 136 aa3.53□□□□□ -1.84
SMARCE1P3-201ENST00000553649 TMSB15BA0A087X1C1 80 aa3.52□□□□□ -1.85
SMARCE1P3-201ENST00000553649 LOC107984156A0A0G2JMH3 177 aa3.52□□□□□ -1.85
SMARCE1P3-201ENST00000553649 TRBV10-2A0A0K0K1G8 114 aa3.52□□□□□ -1.85
SMARCE1P3-201ENST00000553649 M0R381 172 aa3.52□□□□□ -1.85
SMARCE1P3-201ENST00000553649 UBE2L6O14933 153 aa3.52□□□□□ -1.85
SMARCE1P3-201ENST00000553649 NDUFC1O43677 76 aa3.52□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 103.2 ms