RNA–Protein interactions for RNA: ENST00000553488.5

ATXN3-219, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,065 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-219ENST00000553488 NAT8BQ9UHF3 227 aa4.11□□□□□ -1.75
ATXN3-219ENST00000553488 F8VRH5 84 aa4.1□□□□□ -1.75
ATXN3-219ENST00000553488 UBE2AP49459 152 aa4.1□□□□□ -1.75
ATXN3-219ENST00000553488 CKS1BP61024 79 aa4.1□□□□□ -1.75
ATXN3-219ENST00000553488 KRTAP19-2Q3LHN2 52 aa4.1□□□□□ -1.75
ATXN3-219ENST00000553488 Q6ZN92 141 aa4.1□□□□□ -1.75
ATXN3-219ENST00000553488 TEX43Q6ZNM6 134 aa4.1□□□□□ -1.75
ATXN3-219ENST00000553488 C3orf22Q8N5N4 141 aa4.1□□□□□ -1.75
ATXN3-219ENST00000553488 AMELXQ99217 191 aa4.1□□□□□ -1.75
ATXN3-219ENST00000553488 EIF5A2Q9GZV4 153 aaKnown RBP4.1□□□□□ -1.75
ATXN3-219ENST00000553488 TOMM7Q9P0U1 55 aa4.1□□□□□ -1.75
ATXN3-219ENST00000553488 IGKV2D-26A0A0A0MRZ7 120 aa4.09□□□□□ -1.75
ATXN3-219ENST00000553488 A0A1B0GXF2 115 aa4.09□□□□□ -1.75
ATXN3-219ENST00000553488 SMIM27A0A1W2PRY6 76 aa4.09□□□□□ -1.75
ATXN3-219ENST00000553488 TMEM218A2RU14 115 aa4.09□□□□□ -1.75
ATXN3-219ENST00000553488 S100A8P05109 93 aa4.09□□□□□ -1.75
ATXN3-219ENST00000553488 AKR1D1P51857 326 aa4.09□□□□□ -1.75
ATXN3-219ENST00000553488 C10orf91Q5T1B1 145 aa4.09□□□□□ -1.75
ATXN3-219ENST00000553488 C12orf57Q99622 126 aa4.09□□□□□ -1.75
ATXN3-219ENST00000553488 SEC11CQ9BY50 192 aa4.09□□□□□ -1.75
ATXN3-219ENST00000553488 A0A1B0GW15 77 aa4.08□□□□□ -1.76
ATXN3-219ENST00000553488 PCP4L1A6NKN8 68 aa4.08□□□□□ -1.76
ATXN3-219ENST00000553488 F8W036 122 aa4.08□□□□□ -1.76
ATXN3-219ENST00000553488 SRP19P09132 144 aaKnown RBP4.08□□□□□ -1.76
ATXN3-219ENST00000553488 SMIM6P0DI80 62 aa4.08□□□□□ -1.76
ATXN3-219ENST00000553488 RAB5BP61020 215 aa4.08□□□□□ -1.76
ATXN3-219ENST00000553488 PRLHP81277 87 aa4.08□□□□□ -1.76
ATXN3-219ENST00000553488 C6orf226Q5I0X4 101 aa4.08□□□□□ -1.76
ATXN3-219ENST00000553488 C2orf88Q9BSF0 95 aa4.08□□□□□ -1.76
ATXN3-219ENST00000553488 CDKN2A-AS1Q9UH64 79 aa4.08□□□□□ -1.76
ATXN3-219ENST00000553488 IGKV2-28A0A075B6P5 120 aa4.07□□□□□ -1.76
ATXN3-219ENST00000553488 IGKV2D-28P01615 120 aa4.07□□□□□ -1.76
ATXN3-219ENST00000553488 PPBPP02775 128 aa4.07□□□□□ -1.76
ATXN3-219ENST00000553488 CXCL5P42830 114 aa4.07□□□□□ -1.76
ATXN3-219ENST00000553488 RPL23P62829 140 aaKnown RBP4.07□□□□□ -1.76
ATXN3-219ENST00000553488 MT1HP80294 61 aa4.07□□□□□ -1.76
ATXN3-219ENST00000553488 PEA15Q15121 130 aa4.07□□□□□ -1.76
ATXN3-219ENST00000553488 LCE1EQ5T753 118 aa4.07□□□□□ -1.76
ATXN3-219ENST00000553488 C2orf66Q6UXQ4 117 aa4.07□□□□□ -1.76
ATXN3-219ENST00000553488 IGIPA6NJ69 53 aa4.06□□□□□ -1.76
ATXN3-219ENST00000553488 SMIM1B2RUZ4 78 aa4.06□□□□□ -1.76
ATXN3-219ENST00000553488 RAB5AP20339 215 aa4.06□□□□□ -1.76
ATXN3-219ENST00000553488 MRPL54Q6P161 138 aaKnown RBP4.06□□□□□ -1.76
ATXN3-219ENST00000553488 SPAG11AQ6PDA7 123 aa4.06□□□□□ -1.76
ATXN3-219ENST00000553488 ORMDL3Q8N138 153 aa4.06□□□□□ -1.76
ATXN3-219ENST00000553488 LINC00337Q8N6G1 96 aa4.06□□□□□ -1.76
ATXN3-219ENST00000553488 PLEKHB2Q96CS7 222 aa4.06□□□□□ -1.76
ATXN3-219ENST00000553488 TMEM126AQ9H061 195 aa4.06□□□□□ -1.76
ATXN3-219ENST00000553488 SMCO4Q9NRQ5 59 aa4.06□□□□□ -1.76
ATXN3-219ENST00000553488 CYSLTR1Q9Y271 337 aa4.06□□□□□ -1.76
ATXN3-219ENST00000553488 SSPOA2VEC9 5147 aa4.05□□□□□ -1.76
ATXN3-219ENST00000553488 TMEM238C9JI98 176 aa4.05□□□□□ -1.76
ATXN3-219ENST00000553488 HERVK_113P63121 156 aa4.05□□□□□ -1.76
ATXN3-219ENST00000553488 RPL24P83731 157 aaKnown RBP4.05□□□□□ -1.76
ATXN3-219ENST00000553488 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.05□□□□□ -1.76
ATXN3-219ENST00000553488 FAM19A1Q7Z5A9 133 aa4.05□□□□□ -1.76
ATXN3-219ENST00000553488 NKAPP1Q8N9T2 125 aa4.05□□□□□ -1.76
ATXN3-219ENST00000553488 PRELID3AQ96N28 172 aa4.05□□□□□ -1.76
ATXN3-219ENST00000553488 IGLV5-45A0A087WSX0 123 aa4.04□□□□□ -1.76
ATXN3-219ENST00000553488 M0R378 163 aa4.04□□□□□ -1.76
ATXN3-219ENST00000553488 MT-ND4LP03901 98 aa4.04□□□□□ -1.76
ATXN3-219ENST00000553488 S100A6P06703 90 aa4.04□□□□□ -1.76
ATXN3-219ENST00000553488 ADCYAP1P18509 176 aa4.04□□□□□ -1.76
ATXN3-219ENST00000553488 S100PP25815 95 aa4.04□□□□□ -1.76
ATXN3-219ENST00000553488 SEC61GP60059 68 aa4.04□□□□□ -1.76
ATXN3-219ENST00000553488 ADIRFQ15847 76 aa4.04□□□□□ -1.76
ATXN3-219ENST00000553488 TMEM136Q6ZRR5 245 aa4.04□□□□□ -1.76
ATXN3-219ENST00000553488 CBLN2Q8IUK8 224 aa4.04□□□□□ -1.76
ATXN3-219ENST00000553488 USH2AO75445 5202 aa4.03□□□□□ -1.76
ATXN3-219ENST00000553488 SEC11AP67812 179 aa4.03□□□□□ -1.76
ATXN3-219ENST00000553488 PDZD11Q5EBL8 140 aa4.03□□□□□ -1.76
ATXN3-219ENST00000553488 Q8N8P6 123 aa4.03□□□□□ -1.76
ATXN3-219ENST00000553488 Q8NBF4 154 aa4.03□□□□□ -1.76
ATXN3-219ENST00000553488 Q8NDZ9 215 aa4.03□□□□□ -1.76
ATXN3-219ENST00000553488 COX7B2Q8TF08 81 aa4.03□□□□□ -1.76
ATXN3-219ENST00000553488 SPRR4Q96PI1 79 aa4.03□□□□□ -1.76
ATXN3-219ENST00000553488 NAT8Q9UHE5 227 aa4.03□□□□□ -1.76
ATXN3-219ENST00000553488 LAMTOR2Q9Y2Q5 125 aa4.03□□□□□ -1.76
ATXN3-219ENST00000553488 LOC389332A0A1B0GUA5 103 aa4.02□□□□□ -1.77
ATXN3-219ENST00000553488 COLCA2A8K830 154 aa4.02□□□□□ -1.77
ATXN3-219ENST00000553488 C9JQL5 133 aa4.02□□□□□ -1.77
ATXN3-219ENST00000553488 CFC1BP0CG36 223 aa4.02□□□□□ -1.77
ATXN3-219ENST00000553488 RHEBQ15382 184 aa4.02□□□□□ -1.77
ATXN3-219ENST00000553488 ORMDL2Q53FV1 153 aa4.02□□□□□ -1.77
ATXN3-219ENST00000553488 ATP5L2Q7Z4Y8 100 aa4.02□□□□□ -1.77
ATXN3-219ENST00000553488 DAND5Q8N907 189 aa4.02□□□□□ -1.77
ATXN3-219ENST00000553488 TIMM17AQ99595 171 aa4.02□□□□□ -1.77
ATXN3-219ENST00000553488 GNB1LQ9BYB4 327 aa4.02□□□□□ -1.77
ATXN3-219ENST00000553488 MAP1LC3AQ9H492 121 aa4.02□□□□□ -1.77
ATXN3-219ENST00000553488 GEMIN7Q9H840 131 aaKnown RBP4.02□□□□□ -1.77
ATXN3-219ENST00000553488 SMIM29Q86T20 159 aa4.01□□□□□ -1.77
ATXN3-219ENST00000553488 HIGD2AQ9BW72 106 aa4.01□□□□□ -1.77
ATXN3-219ENST00000553488 RPS10P5Q9NQ39 176 aa4.01□□□□□ -1.77
ATXN3-219ENST00000553488 TINCRA0A1B0GVN0 87 aa4□□□□□ -1.77
ATXN3-219ENST00000553488 LINC00587B1AMM8 73 aa4□□□□□ -1.77
ATXN3-219ENST00000553488 K7EMI3 77 aa4□□□□□ -1.77
ATXN3-219ENST00000553488 SPINK1P00995 79 aa4□□□□□ -1.77
ATXN3-219ENST00000553488 SPINK8P0C7L1 97 aa4□□□□□ -1.77
ATXN3-219ENST00000553488 Q8N377 158 aa4□□□□□ -1.77
ATXN3-219ENST00000553488 TOMM6Q96B49 74 aa4□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 81.5 ms