RNA–Protein interactions for RNA: ENST00000553447.6

PSEN1-206, Transcript of presenilin 1, humanhuman

TSL 4

Gene PSEN1, Length 572 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-206ENST00000553447 IGKV2D-28P01615 120 aa11.38□□□□□ -0.59
PSEN1-206ENST00000553447 RPL18AQ02543 176 aaKnown RBP11.38□□□□□ -0.59
PSEN1-206ENST00000553447 GAGE2EQ4V326 116 aa11.38□□□□□ -0.59
PSEN1-206ENST00000553447 GAGE2DQ9UEU5 116 aa11.38□□□□□ -0.59
PSEN1-206ENST00000553447 LOC107984640A0A0U1RRK4 108 aa11.37□□□□□ -0.59
PSEN1-206ENST00000553447 LCE6AA0A183 80 aa11.37□□□□□ -0.59
PSEN1-206ENST00000553447 PGPEP1Q9NXJ5 209 aa11.37□□□□□ -0.59
PSEN1-206ENST00000553447 TSPAN13O95857 204 aa11.36□□□□□ -0.59
PSEN1-206ENST00000553447 Q8NDZ9 215 aa11.36□□□□□ -0.59
PSEN1-206ENST00000553447 A0A1B0GV90 55 aa11.35□□□□□ -0.59
PSEN1-206ENST00000553447 H3BUT2 72 aa11.35□□□□□ -0.59
PSEN1-206ENST00000553447 RPL13AP40429 203 aaKnown RBP11.35□□□□□ -0.59
PSEN1-206ENST00000553447 NAA38Q9BRA0 125 aaKnown RBP11.35□□□□□ -0.59
PSEN1-206ENST00000553447 TRAV13-2A0A0B4J235 113 aa11.34□□□□□ -0.59
PSEN1-206ENST00000553447 C9orf129Q5T035 196 aaKnown RBP11.34□□□□□ -0.59
PSEN1-206ENST00000553447 LINC00337Q8N6G1 96 aa11.34□□□□□ -0.59
PSEN1-206ENST00000553447 DNAH2Q9P225 4427 aa11.33□□□□□ -0.6
PSEN1-206ENST00000553447 H7C2G1 150 aa11.33□□□□□ -0.6
PSEN1-206ENST00000553447 RTL8CO15255 209 aa11.33□□□□□ -0.6
PSEN1-206ENST00000553447 PRR3P79522 188 aaKnown RBP11.33□□□□□ -0.6
PSEN1-206ENST00000553447 GAGE2BQ13066 116 aa11.33□□□□□ -0.6
PSEN1-206ENST00000553447 C9orf163Q8N9P6 203 aa11.33□□□□□ -0.6
PSEN1-206ENST00000553447 NCR3O14931 201 aa11.31□□□□□ -0.6
PSEN1-206ENST00000553447 TNP2Q05952 138 aa11.31□□□□□ -0.6
PSEN1-206ENST00000553447 Q1RN00 199 aa11.31□□□□□ -0.6
PSEN1-206ENST00000553447 A0A1W2PPM0 123 aa11.3□□□□□ -0.6
PSEN1-206ENST00000553447 VPREB1P12018 145 aa11.3□□□□□ -0.6
PSEN1-206ENST00000553447 PKIGQ9Y2B9 76 aa11.3□□□□□ -0.6
PSEN1-206ENST00000553447 TRBV10-2A0A0K0K1G8 114 aa11.29□□□□□ -0.6
PSEN1-206ENST00000553447 PLA2G2DQ9UNK4 145 aa11.29□□□□□ -0.6
PSEN1-206ENST00000553447 DNAH17Q9UFH2 4485 aa11.29□□□□□ -0.6
PSEN1-206ENST00000553447 HYDINQ4G0P3 5121 aa11.28□□□□□ -0.6
PSEN1-206ENST00000553447 A0A096LNI7 61 aa11.28□□□□□ -0.6
PSEN1-206ENST00000553447 C16orf90A8MZG2 172 aa11.28□□□□□ -0.6
PSEN1-206ENST00000553447 OR13C6PQ8NH95 151 aa11.28□□□□□ -0.6
PSEN1-206ENST00000553447 FABP2P12104 132 aa11.26□□□□□ -0.61
PSEN1-206ENST00000553447 PSMB2P49721 201 aa11.26□□□□□ -0.61
PSEN1-206ENST00000553447 SERTAD4-AS1Q5TG53 156 aa11.26□□□□□ -0.61
PSEN1-206ENST00000553447 SACSQ9NZJ4 4579 aa11.25□□□□□ -0.61
PSEN1-206ENST00000553447 VAMP3Q15836 100 aa11.25□□□□□ -0.61
PSEN1-206ENST00000553447 LINC01620Q4KN68 170 aa11.25□□□□□ -0.61
PSEN1-206ENST00000553447 SDIM1Q6ZPB5 146 aa11.25□□□□□ -0.61
PSEN1-206ENST00000553447 TMEM126AQ9H061 195 aa11.25□□□□□ -0.61
PSEN1-206ENST00000553447 IGLV5-37A0A075B6J1 123 aa11.24□□□□□ -0.61
PSEN1-206ENST00000553447 IGKV2-24A0A0C4DH68 120 aa11.24□□□□□ -0.61
PSEN1-206ENST00000553447 FAM168BA1KXE4 195 aa11.24□□□□□ -0.61
PSEN1-206ENST00000553447 M0R378 163 aa11.24□□□□□ -0.61
PSEN1-206ENST00000553447 TRIAP1O43715 76 aa11.24□□□□□ -0.61
PSEN1-206ENST00000553447 S100A7L2Q5SY68 101 aa11.24□□□□□ -0.61
PSEN1-206ENST00000553447 FRAS1Q86XX4 4008 aa11.24□□□□□ -0.61
PSEN1-206ENST00000553447 IGLV5-52A0A0A0MRZ9 124 aa11.23□□□□□ -0.61
PSEN1-206ENST00000553447 IGLV6-57P01721 117 aa11.23□□□□□ -0.61
PSEN1-206ENST00000553447 FUSP35637 526 aaKnown RBP eCLIP11.23□□□□□ -0.61
PSEN1-206ENST00000553447 RPL28P46779 137 aaKnown RBP11.23□□□□□ -0.61
PSEN1-206ENST00000553447 NKAPP1Q8N9T2 125 aa11.23□□□□□ -0.61
PSEN1-206ENST00000553447 SMIM11BQ8TCY0 68 aa11.23□□□□□ -0.61
PSEN1-206ENST00000553447 LYRM7Q5U5X0 104 aa11.22□□□□□ -0.61
PSEN1-206ENST00000553447 KRTAP7-1Q8IUC3 87 aa11.22□□□□□ -0.61
PSEN1-206ENST00000553447 CHTF8P0CG12 524 aa11.21□□□□□ -0.61
PSEN1-206ENST00000553447 SCGB1C2P0DMR2 95 aa11.21□□□□□ -0.61
PSEN1-206ENST00000553447 FAM19A5Q7Z5A7 132 aaPredicted RBP11.21□□□□□ -0.61
PSEN1-206ENST00000553447 SPCS1Q9Y6A9 102 aa11.21□□□□□ -0.61
PSEN1-206ENST00000553447 TRBV10-3A0A0K0K1G6 114 aa11.2□□□□□ -0.62
PSEN1-206ENST00000553447 COX6CP09669 75 aa11.2□□□□□ -0.62
PSEN1-206ENST00000553447 K7EP34 96 aa11.19□□□□□ -0.62
PSEN1-206ENST00000553447 C7orf33Q8WU49 177 aa11.19□□□□□ -0.62
PSEN1-206ENST00000553447 LINC00474Q9P2X8 69 aa11.19□□□□□ -0.62
PSEN1-206ENST00000553447 C22orf24Q9Y442 160 aa11.18□□□□□ -0.62
PSEN1-206ENST00000553447 A0A1W2PNN7 141 aa11.17□□□□□ -0.62
PSEN1-206ENST00000553447 GAGE10A6NGK3 116 aa11.17□□□□□ -0.62
PSEN1-206ENST00000553447 GTF2H5Q6ZYL4 71 aa11.17□□□□□ -0.62
PSEN1-206ENST00000553447 KRTAP10-2P60368 255 aa11.16□□□□□ -0.62
PSEN1-206ENST00000553447 TRBV20-1A0A075B6N2 111 aa11.15□□□□□ -0.62
PSEN1-206ENST00000553447 TRAV23DV6A0A075B6W5 121 aa11.15□□□□□ -0.62
PSEN1-206ENST00000553447 PANO1I0J062 215 aa11.15□□□□□ -0.62
PSEN1-206ENST00000553447 TCL1BO95988 128 aa11.15□□□□□ -0.62
PSEN1-206ENST00000553447 LINC00336Q6ZUF6 198 aa11.15□□□□□ -0.62
PSEN1-206ENST00000553447 SPACA4Q8TDM5 124 aa11.15□□□□□ -0.62
PSEN1-206ENST00000553447 M0QXV9 152 aa11.14□□□□□ -0.63
PSEN1-206ENST00000553447 UBE2V1Q13404 147 aa11.14□□□□□ -0.63
PSEN1-206ENST00000553447 MRPL55Q7Z7F7 128 aaKnown RBP11.14□□□□□ -0.63
PSEN1-206ENST00000553447 LINC00167Q96N53 147 aa11.14□□□□□ -0.63
PSEN1-206ENST00000553447 CBY1Q9Y3M2 126 aa11.14□□□□□ -0.63
PSEN1-206ENST00000553447 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP11.14□□□□□ -0.63
PSEN1-206ENST00000553447 HECTD4Q9Y4D8 3996 aa11.13□□□□□ -0.63
PSEN1-206ENST00000553447 C6orf99Q4VX62 202 aa11.13□□□□□ -0.63
PSEN1-206ENST00000553447 CLEC2BQ92478 149 aa11.13□□□□□ -0.63
PSEN1-206ENST00000553447 DNAH11Q96DT5 4516 aa11.11□□□□□ -0.63
PSEN1-206ENST00000553447 FAT2Q9NYQ8 4349 aa11.11□□□□□ -0.63
PSEN1-206ENST00000553447 IGLV1-50A0A075B6I6 118 aa11.11□□□□□ -0.63
PSEN1-206ENST00000553447 H0YGX0 51 aa11.11□□□□□ -0.63
PSEN1-206ENST00000553447 ATXN8Q156A1 80 aa11.11□□□□□ -0.63
PSEN1-206ENST00000553447 KCNQ1DNQ9H478 68 aa11.11□□□□□ -0.63
PSEN1-206ENST00000553447 RPL37AP8A6NKH3 93 aa11.1□□□□□ -0.63
PSEN1-206ENST00000553447 H3BMG7 143 aa11.1□□□□□ -0.63
PSEN1-206ENST00000553447 ZNF73O43830 326 aaPredicted RBP11.1□□□□□ -0.63
PSEN1-206ENST00000553447 DIRC1Q969H9 104 aa11.1□□□□□ -0.63
PSEN1-206ENST00000553447 DPH3Q96FX2 82 aa11.1□□□□□ -0.63
PSEN1-206ENST00000553447 LST1O00453 97 aa11.09□□□□□ -0.63
PSEN1-206ENST00000553447 EPM2AB3EWF7 344 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 69.8 ms