RNA–Protein interactions for RNA: ENST00000553309.5

ATXN3-218, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,022 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-218ENST00000553309 TRAV16A0A0A6YYK6 109 aaPredicted RBP3.19□□□□□ -1.9
ATXN3-218ENST00000553309 HIGD1CA8MV81 97 aa3.19□□□□□ -1.9
ATXN3-218ENST00000553309 IGHV3-33P01772 117 aa3.19□□□□□ -1.9
ATXN3-218ENST00000553309 COX6CP09669 75 aa3.19□□□□□ -1.9
ATXN3-218ENST00000553309 PLNP26678 52 aa3.19□□□□□ -1.9
ATXN3-218ENST00000553309 Q1T7F1 81 aa3.19□□□□□ -1.9
ATXN3-218ENST00000553309 MINOS1Q5TGZ0 78 aa3.19□□□□□ -1.9
ATXN3-218ENST00000553309 FAM223AQ8IWN6 122 aa3.19□□□□□ -1.9
ATXN3-218ENST00000553309 C5orf56Q8N8D9 126 aa3.19□□□□□ -1.9
ATXN3-218ENST00000553309 SLC25A29Q8N8R3 303 aa3.19□□□□□ -1.9
ATXN3-218ENST00000553309 FXYD5Q96DB9 178 aa3.19□□□□□ -1.9
ATXN3-218ENST00000553309 MRPL35Q9NZE8 188 aaKnown RBP3.19□□□□□ -1.9
ATXN3-218ENST00000553309 MINOS1-NBL1R4GNA1 71 aa3.19□□□□□ -1.9
ATXN3-218ENST00000553309 TRAV7A0A075B6U4 112 aa3.18□□□□□ -1.9
ATXN3-218ENST00000553309 FAM223BA6NKX1 122 aa3.18□□□□□ -1.9
ATXN3-218ENST00000553309 K7EMI3 77 aa3.18□□□□□ -1.9
ATXN3-218ENST00000553309 M0R381 172 aa3.18□□□□□ -1.9
ATXN3-218ENST00000553309 SMR3BP02814 79 aaPredicted RBP3.18□□□□□ -1.9
ATXN3-218ENST00000553309 ARL14EPLP0DKL9 152 aa3.18□□□□□ -1.9
ATXN3-218ENST00000553309 MP68P56378 58 aa3.18□□□□□ -1.9
ATXN3-218ENST00000553309 LRP2P98164 4655 aa3.18□□□□□ -1.9
ATXN3-218ENST00000553309 RHOHQ15669 191 aa3.18□□□□□ -1.9
ATXN3-218ENST00000553309 ESRGQ1W209 222 aa3.18□□□□□ -1.9
ATXN3-218ENST00000553309 ATP11AUNQ6ZP68 121 aa3.18□□□□□ -1.9
ATXN3-218ENST00000553309 FAM19A3Q7Z5A8 133 aa3.18□□□□□ -1.9
ATXN3-218ENST00000553309 Q8IYB0 196 aa3.18□□□□□ -1.9
ATXN3-218ENST00000553309 SMCR5Q8TEV8 140 aa3.18□□□□□ -1.9
ATXN3-218ENST00000553309 DIRC1Q969H9 104 aa3.18□□□□□ -1.9
ATXN3-218ENST00000553309 MUC2Q02817 5179 aa3.17□□□□□ -1.9
ATXN3-218ENST00000553309 FAT4Q6V0I7 4981 aa3.17□□□□□ -1.9
ATXN3-218ENST00000553309 TRBV10-3A0A0K0K1G6 114 aa3.17□□□□□ -1.9
ATXN3-218ENST00000553309 C17orf98A8MV24 154 aa3.17□□□□□ -1.9
ATXN3-218ENST00000553309 COX7A2LO14548 114 aa3.17□□□□□ -1.9
ATXN3-218ENST00000553309 ZNF138P52744 262 aa3.17□□□□□ -1.9
ATXN3-218ENST00000553309 PLGLAQ15195 96 aa3.17□□□□□ -1.9
ATXN3-218ENST00000553309 DEFB135Q30KP9 77 aa3.17□□□□□ -1.9
ATXN3-218ENST00000553309 MRPL51Q4U2R6 128 aaKnown RBP3.17□□□□□ -1.9
ATXN3-218ENST00000553309 SPANXN5Q5MJ07 72 aa3.17□□□□□ -1.9
ATXN3-218ENST00000553309 S100A7L2Q5SY68 101 aa3.17□□□□□ -1.9
ATXN3-218ENST00000553309 ATP5EP2Q5VTU8 51 aa3.17□□□□□ -1.9
ATXN3-218ENST00000553309 ZNF818PQ6ZRF7 136 aa3.17□□□□□ -1.9
ATXN3-218ENST00000553309 C7orf65Q6ZTY9 151 aa3.17□□□□□ -1.9
ATXN3-218ENST00000553309 C20orf197Q8N268 126 aa3.17□□□□□ -1.9
ATXN3-218ENST00000553309 NKAPP1Q8N9T2 125 aa3.17□□□□□ -1.9
ATXN3-218ENST00000553309 DYNLRB2Q8TF09 96 aa3.17□□□□□ -1.9
ATXN3-218ENST00000553309 TIMM21Q9BVV7 248 aa3.17□□□□□ -1.9
ATXN3-218ENST00000553309 RPP21Q9H633 154 aaKnown RBP3.17□□□□□ -1.9
ATXN3-218ENST00000553309 ZNF355PQ9NSJ1 428 aa3.17□□□□□ -1.9
ATXN3-218ENST00000553309 UBE2D4Q9Y2X8 147 aa3.17□□□□□ -1.9
ATXN3-218ENST00000553309 TIMM8BQ9Y5J9 83 aaPredicted RBP3.17□□□□□ -1.9
ATXN3-218ENST00000553309 IGKV1D-8A0A087WSZ0 117 aa3.16□□□□□ -1.9
ATXN3-218ENST00000553309 TRAV12-1A0A0B4J245 112 aa3.16□□□□□ -1.9
ATXN3-218ENST00000553309 IGKV1-12A0A0C4DH73 117 aa3.16□□□□□ -1.9
ATXN3-218ENST00000553309 TMEM30CPA0ZSE6 113 aa3.16□□□□□ -1.9
ATXN3-218ENST00000553309 IGKV1D-12P01611 117 aa3.16□□□□□ -1.9
ATXN3-218ENST00000553309 IGHV3-11P01762 117 aa3.16□□□□□ -1.9
ATXN3-218ENST00000553309 FUSP35637 526 aaKnown RBP eCLIP3.16□□□□□ -1.9
ATXN3-218ENST00000553309 UBE2AP49459 152 aa3.16□□□□□ -1.9
ATXN3-218ENST00000553309 FXYD4P59646 89 aa3.16□□□□□ -1.9
ATXN3-218ENST00000553309 CIRBPQ14011 172 aaKnown RBP3.16□□□□□ -1.9
ATXN3-218ENST00000553309 KIAA0087Q14695 138 aa3.16□□□□□ -1.9
ATXN3-218ENST00000553309 C1orf134Q5TEV5 83 aa3.16□□□□□ -1.9
ATXN3-218ENST00000553309 LYPD1Q8N2G4 141 aa3.16□□□□□ -1.9
ATXN3-218ENST00000553309 UBALD1Q8TB05 177 aa3.16□□□□□ -1.9
ATXN3-218ENST00000553309 TMEM263Q8WUH6 116 aaKnown RBP3.16□□□□□ -1.9
ATXN3-218ENST00000553309 TTTY13Q9BZ97 58 aa3.16□□□□□ -1.9
ATXN3-218ENST00000553309 DPM3Q9P2X0 92 aa3.16□□□□□ -1.9
ATXN3-218ENST00000553309 IGKV1-27A0A075B6S5 117 aa3.15□□□□□ -1.91
ATXN3-218ENST00000553309 IGHV3OR16-9A0A0B4J2B5 98 aa3.15□□□□□ -1.91
ATXN3-218ENST00000553309 A0A1B0GUT8 65 aa3.15□□□□□ -1.91
ATXN3-218ENST00000553309 TMEM223A0PJW6 202 aa3.15□□□□□ -1.91
ATXN3-218ENST00000553309 G3V318 75 aa3.15□□□□□ -1.91
ATXN3-218ENST00000553309 DEFB4AO15263 64 aa3.15□□□□□ -1.91
ATXN3-218ENST00000553309 IGHV3-30P01768 117 aa3.15□□□□□ -1.91
ATXN3-218ENST00000553309 IGHV3-30-5P0DP03 117 aa3.15□□□□□ -1.91
ATXN3-218ENST00000553309 IAPPP10997 89 aa3.15□□□□□ -1.91
ATXN3-218ENST00000553309 EDDM3BP56851 147 aa3.15□□□□□ -1.91
ATXN3-218ENST00000553309 HAMPP81172 84 aa3.15□□□□□ -1.91
ATXN3-218ENST00000553309 SFTA2Q6UW10 78 aa3.15□□□□□ -1.91
ATXN3-218ENST00000553309 A0A0J9YY99 117 aa3.14□□□□□ -1.91
ATXN3-218ENST00000553309 LOC100131303A0A0U1RQF7 123 aa3.14□□□□□ -1.91
ATXN3-218ENST00000553309 LOC389332A0A1B0GUA5 103 aa3.14□□□□□ -1.91
ATXN3-218ENST00000553309 IGKV1-5P01602 117 aa3.14□□□□□ -1.91
ATXN3-218ENST00000553309 S100A4P26447 101 aaKnown RBP3.14□□□□□ -1.91
ATXN3-218ENST00000553309 LINC00313P59037 77 aa3.14□□□□□ -1.91
ATXN3-218ENST00000553309 PIGYQ3MUY2 71 aa3.14□□□□□ -1.91
ATXN3-218ENST00000553309 GPHB5Q86YW7 130 aa3.14□□□□□ -1.91
ATXN3-218ENST00000553309 ORMDL3Q8N138 153 aa3.14□□□□□ -1.91
ATXN3-218ENST00000553309 LINC00337Q8N6G1 96 aa3.14□□□□□ -1.91
ATXN3-218ENST00000553309 FGF23Q9GZV9 251 aaPredicted RBP3.14□□□□□ -1.91
ATXN3-218ENST00000553309 LRP1Q07954 4544 aaKnown RBP3.14□□□□□ -1.91
ATXN3-218ENST00000553309 IGHV3-72A0A0B4J1Y9 119 aa3.13□□□□□ -1.91
ATXN3-218ENST00000553309 A6NN06 94 aa3.13□□□□□ -1.91
ATXN3-218ENST00000553309 ZNF815PA8K554 130 aa3.13□□□□□ -1.91
ATXN3-218ENST00000553309 F8VRH5 84 aa3.13□□□□□ -1.91
ATXN3-218ENST00000553309 F8WEM9 126 aa3.13□□□□□ -1.91
ATXN3-218ENST00000553309 BUB1B-PAK6H3BSN5 160 aa3.13□□□□□ -1.91
ATXN3-218ENST00000553309 ERC2-IT1O76042 136 aa3.13□□□□□ -1.91
ATXN3-218ENST00000553309 PRR3P79522 188 aaKnown RBP3.13□□□□□ -1.91
ATXN3-218ENST00000553309 EIF4EBP1Q13541 118 aaPredicted RBP3.13□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 85 ms