RNA–Protein interactions for RNA: ENST00000552960.5

HDAC7-230, Transcript of histone deacetylase 7, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene HDAC7, Length 3,216 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-230ENST00000552960 C6orf99Q4VX62 202 aa8.54□□□□□ -1.04
HDAC7-230ENST00000552960 CMYA5Q8N3K9 4069 aa8.54□□□□□ -1.04
HDAC7-230ENST00000552960 HTN3P15516 51 aa8.54□□□□□ -1.04
HDAC7-230ENST00000552960 RPS28P62857 69 aaKnown RBP8.54□□□□□ -1.04
HDAC7-230ENST00000552960 S100A7L2Q5SY68 101 aa8.54□□□□□ -1.04
HDAC7-230ENST00000552960 LINC00269Q8N2A0 174 aa8.54□□□□□ -1.04
HDAC7-230ENST00000552960 Q8N814 137 aa8.54□□□□□ -1.04
HDAC7-230ENST00000552960 OBSCN-AS1Q96MR7 158 aa8.53□□□□□ -1.04
HDAC7-230ENST00000552960 C19orf73Q9NVV2 129 aa8.53□□□□□ -1.04
HDAC7-230ENST00000552960 LAMTOR3Q9UHA4 124 aa8.53□□□□□ -1.04
HDAC7-230ENST00000552960 Q8N3U1 123 aa8.53□□□□□ -1.04
HDAC7-230ENST00000552960 UPK3BQ9BT76 320 aa8.52□□□□□ -1.04
HDAC7-230ENST00000552960 UBL5Q9BZL1 73 aa8.52□□□□□ -1.05
HDAC7-230ENST00000552960 JMJD7-PLA2G4BH0Y9G9 81 aa8.52□□□□□ -1.05
HDAC7-230ENST00000552960 TMEM256-PLSCR3K7ERE1 68 aa8.52□□□□□ -1.05
HDAC7-230ENST00000552960 HAMPP81172 84 aa8.52□□□□□ -1.05
HDAC7-230ENST00000552960 ANGP03950 147 aaKnown RBP8.51□□□□□ -1.05
HDAC7-230ENST00000552960 NANOS2P60321 138 aaKnown RBP8.5□□□□□ -1.05
HDAC7-230ENST00000552960 Q8IZM0 81 aa8.49□□□□□ -1.05
HDAC7-230ENST00000552960 SNURFQ9Y675 71 aa8.48□□□□□ -1.05
HDAC7-230ENST00000552960 DEFB135Q30KP9 77 aa8.48□□□□□ -1.05
HDAC7-230ENST00000552960 CSNK1G2-AS1Q8NCQ2 148 aa8.48□□□□□ -1.05
HDAC7-230ENST00000552960 CHCHD10Q8WYQ3 142 aaPredicted RBP8.48□□□□□ -1.05
HDAC7-230ENST00000552960 C6orf223Q8N319 242 aa8.47□□□□□ -1.05
HDAC7-230ENST00000552960 RBM3P98179 157 aaKnown RBP8.46□□□□□ -1.05
HDAC7-230ENST00000552960 Q8NDZ9 215 aa8.46□□□□□ -1.05
HDAC7-230ENST00000552960 M0R2N4 97 aa8.46□□□□□ -1.06
HDAC7-230ENST00000552960 Q5XG85 94 aa8.46□□□□□ -1.06
HDAC7-230ENST00000552960 CMC4P56277 68 aaPredicted RBP8.45□□□□□ -1.06
HDAC7-230ENST00000552960 SCXQ7RTU7 201 aa8.45□□□□□ -1.06
HDAC7-230ENST00000552960 UNQ6190/PRO20217Q6UXQ8 127 aa8.44□□□□□ -1.06
HDAC7-230ENST00000552960 OXLD1Q5BKU9 147 aa8.44□□□□□ -1.06
HDAC7-230ENST00000552960 C10orf25Q5T742 122 aa8.44□□□□□ -1.06
HDAC7-230ENST00000552960 FAM236DA0A1B0GTK5 79 aa8.44□□□□□ -1.06
HDAC7-230ENST00000552960 FAM236CP0DP71 79 aa8.44□□□□□ -1.06
HDAC7-230ENST00000552960 REG3AQ06141 175 aa8.44□□□□□ -1.06
HDAC7-230ENST00000552960 PRO0255Q9UI72 69 aa8.44□□□□□ -1.06
HDAC7-230ENST00000552960 PRB2P02812 416 aaPredicted RBP8.43□□□□□ -1.06
HDAC7-230ENST00000552960 KRTAP24-1Q3LI83 254 aa8.43□□□□□ -1.06
HDAC7-230ENST00000552960 Q6ZQY7 126 aa8.43□□□□□ -1.06
HDAC7-230ENST00000552960 KIAA0087Q14695 138 aa8.43□□□□□ -1.06
HDAC7-230ENST00000552960 CD164L2Q6UWJ8 174 aa8.43□□□□□ -1.06
HDAC7-230ENST00000552960 XAGE1AQ9HD64 81 aa8.42□□□□□ -1.06
HDAC7-230ENST00000552960 A0A1B0GUV1 79 aa8.42□□□□□ -1.06
HDAC7-230ENST00000552960 LINC00575Q6W349 94 aa8.42□□□□□ -1.06
HDAC7-230ENST00000552960 ATP5EP2Q5VTU8 51 aa8.41□□□□□ -1.06
HDAC7-230ENST00000552960 RMI2Q96E14 147 aa8.41□□□□□ -1.06
HDAC7-230ENST00000552960 C1orf43Q9BWL3 253 aa8.41□□□□□ -1.06
HDAC7-230ENST00000552960 SPAG11BQ08648 103 aa8.41□□□□□ -1.06
HDAC7-230ENST00000552960 LINC00167Q96N53 147 aa8.41□□□□□ -1.06
HDAC7-230ENST00000552960 TRAV10A0A0B4J240 114 aa8.4□□□□□ -1.06
HDAC7-230ENST00000552960 NDUFC2O95298 119 aa8.4□□□□□ -1.06
HDAC7-230ENST00000552960 PKIGQ9Y2B9 76 aa8.4□□□□□ -1.06
HDAC7-230ENST00000552960 LINC01547P58512 204 aaPredicted RBP8.39□□□□□ -1.07
HDAC7-230ENST00000552960 Q6ZQT0 140 aa8.39□□□□□ -1.07
HDAC7-230ENST00000552960 TENM3Q9P273 2699 aa8.39□□□□□ -1.07
HDAC7-230ENST00000552960 LINC00336Q6ZUF6 198 aa8.39□□□□□ -1.07
HDAC7-230ENST00000552960 COX17Q14061 63 aa8.39□□□□□ -1.07
HDAC7-230ENST00000552960 KLK12Q9UKR0 248 aa8.39□□□□□ -1.07
HDAC7-230ENST00000552960 ZNF561-AS1K7EIQ3 104 aa8.38□□□□□ -1.07
HDAC7-230ENST00000552960 Q6ZVQ6 151 aa8.38□□□□□ -1.07
HDAC7-230ENST00000552960 F8WEM9 126 aa8.37□□□□□ -1.07
HDAC7-230ENST00000552960 TRBV10-3A0A0K0K1G6 114 aa8.36□□□□□ -1.07
HDAC7-230ENST00000552960 C9orf66Q5T8R8 295 aa8.36□□□□□ -1.07
HDAC7-230ENST00000552960 DAD1P61803 113 aa8.36□□□□□ -1.07
HDAC7-230ENST00000552960 X6R8D5 127 aa8.36□□□□□ -1.07
HDAC7-230ENST00000552960 H7BZZ5 65 aa8.35□□□□□ -1.07
HDAC7-230ENST00000552960 WIPF1O43516 503 aa8.35□□□□□ -1.07
HDAC7-230ENST00000552960 MRAPQ8TCY5 172 aa8.35□□□□□ -1.07
HDAC7-230ENST00000552960 LYPD5Q6UWN5 251 aa8.34□□□□□ -1.07
HDAC7-230ENST00000552960 RETNQ9HD89 108 aa8.34□□□□□ -1.07
HDAC7-230ENST00000552960 LINC00474Q9P2X8 69 aa8.34□□□□□ -1.07
HDAC7-230ENST00000552960 A0A0U1RQV1 116 aa8.34□□□□□ -1.07
HDAC7-230ENST00000552960 TRAV7A0A075B6U4 112 aa8.33□□□□□ -1.08
HDAC7-230ENST00000552960 KRTAP10-11P60412 298 aa8.33□□□□□ -1.08
HDAC7-230ENST00000552960 IGHV4-28A0A0C4DH34 117 aa8.33□□□□□ -1.08
HDAC7-230ENST00000552960 HIGD2BQ4VC39 106 aa8.33□□□□□ -1.08
HDAC7-230ENST00000552960 DNAH3Q8TD57 4116 aa8.32□□□□□ -1.08
HDAC7-230ENST00000552960 Q8N9L7 120 aa8.32□□□□□ -1.08
HDAC7-230ENST00000552960 DIRC1Q969H9 104 aa8.32□□□□□ -1.08
HDAC7-230ENST00000552960 MPLKIPQ8TAP9 179 aa8.32□□□□□ -1.08
HDAC7-230ENST00000552960 MUC7Q8TAX7 377 aa8.32□□□□□ -1.08
HDAC7-230ENST00000552960 TM2D3Q9BRN9 247 aa8.31□□□□□ -1.08
HDAC7-230ENST00000552960 SERP1Q9Y6X1 66 aa8.31□□□□□ -1.08
HDAC7-230ENST00000552960 NDUFC2-KCTD14E9PQ53 114 aa8.31□□□□□ -1.08
HDAC7-230ENST00000552960 IGHV4-30-4P0DP06 118 aa8.31□□□□□ -1.08
HDAC7-230ENST00000552960 BRK1Q8WUW1 75 aa8.31□□□□□ -1.08
HDAC7-230ENST00000552960 CELA1Q9UNI1 258 aa8.31□□□□□ -1.08
HDAC7-230ENST00000552960 LOC110117498A0A087WWA1 95 aa8.3□□□□□ -1.08
HDAC7-230ENST00000552960 LINC00612Q8N6U2 182 aa8.3□□□□□ -1.08
HDAC7-230ENST00000552960 ZNF73O43830 326 aaPredicted RBP8.29□□□□□ -1.08
HDAC7-230ENST00000552960 IGLV6-57P01721 117 aa8.29□□□□□ -1.08
HDAC7-230ENST00000552960 COX7BP24311 80 aa8.29□□□□□ -1.08
HDAC7-230ENST00000552960 C6orf48Q9UBA6 75 aa8.28□□□□□ -1.08
HDAC7-230ENST00000552960 LYRM9A8MSI8 78 aa8.27□□□□□ -1.09
HDAC7-230ENST00000552960 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP8.27□□□□□ -1.09
HDAC7-230ENST00000552960 DEFB105AQ8NG35 78 aa8.27□□□□□ -1.09
HDAC7-230ENST00000552960 FP248Q71RG6 208 aaPredicted RBP8.27□□□□□ -1.09
HDAC7-230ENST00000552960 PRO0628Q9UI54 55 aa8.27□□□□□ -1.09
HDAC7-230ENST00000552960 TRBV7-6A0A0J9YX20 115 aa8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 92.8 ms