RNA–Protein interactions for RNA: ENST00000552620.1

CHMP4A-210, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 2

Gene CHMP4A, Length 716 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-210ENST00000552620 UBR5O95071 2799 aaPredicted RBP4.05□□□□□ -1.76
CHMP4A-210ENST00000552620 GVQW2A0A096LPI5 108 aaPredicted RBP4.05□□□□□ -1.76
CHMP4A-210ENST00000552620 IGLV9-49A0A0B4J1Y8 123 aa4.05□□□□□ -1.76
CHMP4A-210ENST00000552620 A0A0J9YWU9 116 aa4.05□□□□□ -1.76
CHMP4A-210ENST00000552620 J3QKU1 62 aa4.05□□□□□ -1.76
CHMP4A-210ENST00000552620 NCR3O14931 201 aa4.05□□□□□ -1.76
CHMP4A-210ENST00000552620 ANGP03950 147 aaKnown RBP4.05□□□□□ -1.76
CHMP4A-210ENST00000552620 SPART-AS1P0CW21 52 aa4.05□□□□□ -1.76
CHMP4A-210ENST00000552620 RPL18AQ02543 176 aaKnown RBP4.05□□□□□ -1.76
CHMP4A-210ENST00000552620 ATP5EP2Q5VTU8 51 aa4.05□□□□□ -1.76
CHMP4A-210ENST00000552620 LINC00575Q6W349 94 aa4.05□□□□□ -1.76
CHMP4A-210ENST00000552620 Q8N9P0 234 aaPredicted RBP4.05□□□□□ -1.76
CHMP4A-210ENST00000552620 LINC00846Q9NV44 126 aa4.05□□□□□ -1.76
CHMP4A-210ENST00000552620 MYO18BQ8IUG5 2567 aa4.05□□□□□ -1.76
CHMP4A-210ENST00000552620 ZNF462Q96JM2 2506 aa4.04□□□□□ -1.76
CHMP4A-210ENST00000552620 POLQO75417 2590 aa4.04□□□□□ -1.76
CHMP4A-210ENST00000552620 A0A096LPF7 62 aa4.04□□□□□ -1.76
CHMP4A-210ENST00000552620 TRBV10-3A0A0K0K1G6 114 aa4.04□□□□□ -1.76
CHMP4A-210ENST00000552620 CRYGAP11844 174 aa4.04□□□□□ -1.76
CHMP4A-210ENST00000552620 C9orf129Q5T035 196 aaKnown RBP4.04□□□□□ -1.76
CHMP4A-210ENST00000552620 C9orf153Q5TBE3 101 aa4.04□□□□□ -1.76
CHMP4A-210ENST00000552620 CLPSL2Q6UWE3 100 aa4.04□□□□□ -1.76
CHMP4A-210ENST00000552620 LYPD5Q6UWN5 251 aa4.04□□□□□ -1.76
CHMP4A-210ENST00000552620 PRR34Q9NV39 138 aa4.04□□□□□ -1.76
CHMP4A-210ENST00000552620 IGKV3D-7A0A0C4DH55 119 aa4.03□□□□□ -1.76
CHMP4A-210ENST00000552620 hADV29S1A0JD25 119 aa4.03□□□□□ -1.76
CHMP4A-210ENST00000552620 PDE6GP18545 87 aa4.03□□□□□ -1.76
CHMP4A-210ENST00000552620 PRR3P79522 188 aaKnown RBP4.03□□□□□ -1.76
CHMP4A-210ENST00000552620 SPAG11BQ08648 103 aa4.03□□□□□ -1.76
CHMP4A-210ENST00000552620 C6orf99Q4VX62 202 aa4.03□□□□□ -1.76
CHMP4A-210ENST00000552620 Q8NAQ8 132 aa4.03□□□□□ -1.76
CHMP4A-210ENST00000552620 C2orf48Q96LS8 159 aa4.03□□□□□ -1.76
CHMP4A-210ENST00000552620 MYO9AB2RTY4 2548 aa4.03□□□□□ -1.76
CHMP4A-210ENST00000552620 CHD6Q8TD26 2715 aa4.03□□□□□ -1.76
CHMP4A-210ENST00000552620 AKAP9Q99996 3911 aa4.02□□□□□ -1.77
CHMP4A-210ENST00000552620 IGKV2D-30A0A075B6S6 120 aa4.02□□□□□ -1.77
CHMP4A-210ENST00000552620 LOC110117498A0A087WWA1 95 aa4.02□□□□□ -1.77
CHMP4A-210ENST00000552620 TRBV7-6A0A0J9YX20 115 aa4.02□□□□□ -1.77
CHMP4A-210ENST00000552620 CYSRT1A8MQ03 144 aa4.02□□□□□ -1.77
CHMP4A-210ENST00000552620 BCE1O60756 84 aa4.02□□□□□ -1.77
CHMP4A-210ENST00000552620 IGLV6-57P01721 117 aa4.02□□□□□ -1.77
CHMP4A-210ENST00000552620 RBM3P98179 157 aaKnown RBP4.02□□□□□ -1.77
CHMP4A-210ENST00000552620 DEFB135Q30KP9 77 aa4.02□□□□□ -1.77
CHMP4A-210ENST00000552620 C6orf223Q8N319 242 aa4.02□□□□□ -1.77
CHMP4A-210ENST00000552620 SERP2Q8N6R1 65 aa4.02□□□□□ -1.77
CHMP4A-210ENST00000552620 WFDC9Q8NEX5 89 aa4.02□□□□□ -1.77
CHMP4A-210ENST00000552620 KRTAP9-8Q9BYQ0 159 aa4.02□□□□□ -1.77
CHMP4A-210ENST00000552620 UBL5Q9BZL1 73 aa4.02□□□□□ -1.77
CHMP4A-210ENST00000552620 NOTCH3Q9UM47 2321 aa4.02□□□□□ -1.77
CHMP4A-210ENST00000552620 APCP25054 2843 aa4.01□□□□□ -1.77
CHMP4A-210ENST00000552620 C2CD3Q4AC94 2353 aa4.01□□□□□ -1.77
CHMP4A-210ENST00000552620 IGLV10-54A0A075B6I4 117 aa4.01□□□□□ -1.77
CHMP4A-210ENST00000552620 H3BNG1 76 aa4.01□□□□□ -1.77
CHMP4A-210ENST00000552620 RPS28P62857 69 aaKnown RBP4.01□□□□□ -1.77
CHMP4A-210ENST00000552620 UNQ6190/PRO20217Q6UXQ8 127 aa4.01□□□□□ -1.77
CHMP4A-210ENST00000552620 DEFB4AO15263 64 aa4□□□□□ -1.77
CHMP4A-210ENST00000552620 CDK2AP2O75956 126 aa4□□□□□ -1.77
CHMP4A-210ENST00000552620 C9orf116Q5BN46 136 aaPredicted RBP4□□□□□ -1.77
CHMP4A-210ENST00000552620 ENHOQ6UWT2 76 aa4□□□□□ -1.77
CHMP4A-210ENST00000552620 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP4□□□□□ -1.77
CHMP4A-210ENST00000552620 SMIM20Q8N5G0 67 aa4□□□□□ -1.77
CHMP4A-210ENST00000552620 KLK12Q9UKR0 248 aa4□□□□□ -1.77
CHMP4A-210ENST00000552620 CELA1Q9UNI1 258 aa4□□□□□ -1.77
CHMP4A-210ENST00000552620 LRRK2Q5S007 2527 aa4□□□□□ -1.77
CHMP4A-210ENST00000552620 ITPR3Q14573 2671 aa3.99□□□□□ -1.77
CHMP4A-210ENST00000552620 SONP18583 2426 aaKnown RBP3.99□□□□□ -1.77
CHMP4A-210ENST00000552620 Q6ZQT0 140 aa3.99□□□□□ -1.77
CHMP4A-210ENST00000552620 DIRC1Q969H9 104 aa3.99□□□□□ -1.77
CHMP4A-210ENST00000552620 DSCR8Q96T75 97 aa3.99□□□□□ -1.77
CHMP4A-210ENST00000552620 SMR3AQ99954 134 aa3.99□□□□□ -1.77
CHMP4A-210ENST00000552620 LAMTOR3Q9UHA4 124 aa3.99□□□□□ -1.77
CHMP4A-210ENST00000552620 USP24Q9UPU5 2620 aa3.99□□□□□ -1.77
CHMP4A-210ENST00000552620 ABCA12Q86UK0 2595 aa3.99□□□□□ -1.77
CHMP4A-210ENST00000552620 TRAV23DV6A0A075B6W5 121 aa3.98□□□□□ -1.77
CHMP4A-210ENST00000552620 M0R378 163 aa3.98□□□□□ -1.77
CHMP4A-210ENST00000552620 HTN3P15516 51 aa3.98□□□□□ -1.77
CHMP4A-210ENST00000552620 COX7BP24311 80 aa3.98□□□□□ -1.77
CHMP4A-210ENST00000552620 EGFEM1PQ0D2K5 195 aa3.98□□□□□ -1.77
CHMP4A-210ENST00000552620 Q8NDZ9 215 aa3.98□□□□□ -1.77
CHMP4A-210ENST00000552620 UPK3BQ9BT76 320 aa3.98□□□□□ -1.77
CHMP4A-210ENST00000552620 C6orf48Q9UBA6 75 aa3.98□□□□□ -1.77
CHMP4A-210ENST00000552620 TLN2Q9Y4G6 2542 aa3.97□□□□□ -1.77
CHMP4A-210ENST00000552620 EPG5Q9HCE0 2579 aa3.97□□□□□ -1.77
CHMP4A-210ENST00000552620 NDUFC2-KCTD14E9PQ53 114 aa3.97□□□□□ -1.77
CHMP4A-210ENST00000552620 ZNF73O43830 326 aaPredicted RBP3.97□□□□□ -1.77
CHMP4A-210ENST00000552620 TMEM258P61165 79 aa3.97□□□□□ -1.77
CHMP4A-210ENST00000552620 CXCL6P80162 114 aa3.97□□□□□ -1.77
CHMP4A-210ENST00000552620 SPATA3Q8NHX4 192 aa3.97□□□□□ -1.77
CHMP4A-210ENST00000552620 PDZD2O15018 2839 aa3.96□□□□□ -1.78
CHMP4A-210ENST00000552620 CSMD2Q7Z408 3487 aa3.96□□□□□ -1.78
CHMP4A-210ENST00000552620 A0A087WVE0 104 aa3.96□□□□□ -1.78
CHMP4A-210ENST00000552620 J3KT08 172 aa3.96□□□□□ -1.78
CHMP4A-210ENST00000552620 ELOF1P60002 83 aaKnown RBP3.96□□□□□ -1.78
CHMP4A-210ENST00000552620 KRTAP26-1Q6PEX3 210 aa3.96□□□□□ -1.78
CHMP4A-210ENST00000552620 Q6ZQY7 126 aa3.96□□□□□ -1.78
CHMP4A-210ENST00000552620 C3orf56Q8N813 242 aa3.96□□□□□ -1.78
CHMP4A-210ENST00000552620 CAMK2N2Q96S95 79 aa3.96□□□□□ -1.78
CHMP4A-210ENST00000552620 CENPEQ02224 2701 aa3.95□□□□□ -1.78
CHMP4A-210ENST00000552620 TRBV7-4A0A0J9YYF1 115 aa3.95□□□□□ -1.78
CHMP4A-210ENST00000552620 LOC107984640A0A0U1RRK4 108 aa3.95□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 94.8 ms