RNA–Protein interactions for RNA: ENST00000551691.5

LIMA1-208, Transcript of LIM domain and actin binding 1, humanhuman

TSL 3

Gene LIMA1, Length 583 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMA1-208ENST00000551691 SPRR5A0A1B0GTR4 108 aa1.87□□□□□ -2.11
LIMA1-208ENST00000551691 GPX1P07203 203 aa1.87□□□□□ -2.11
LIMA1-208ENST00000551691 MGST1P10620 155 aaKnown RBP1.87□□□□□ -2.11
LIMA1-208ENST00000551691 GNG2P59768 71 aa1.87□□□□□ -2.11
LIMA1-208ENST00000551691 ELOBQ15370 118 aa1.87□□□□□ -2.11
LIMA1-208ENST00000551691 SURF2Q15527 256 aaPredicted RBP1.87□□□□□ -2.11
LIMA1-208ENST00000551691 PHF5AQ7RTV0 110 aaKnown RBP1.87□□□□□ -2.11
LIMA1-208ENST00000551691 OR2T35Q8NGX2 323 aa1.87□□□□□ -2.11
LIMA1-208ENST00000551691 DIRC1Q969H9 104 aa1.87□□□□□ -2.11
LIMA1-208ENST00000551691 TIMM21Q9BVV7 248 aa1.87□□□□□ -2.11
LIMA1-208ENST00000551691 LCE3DQ9BYE3 92 aa1.87□□□□□ -2.11
LIMA1-208ENST00000551691 FXYD6Q9H0Q3 95 aa1.87□□□□□ -2.11
LIMA1-208ENST00000551691 A0A0G2JQZ4 141 aa1.86□□□□□ -2.11
LIMA1-208ENST00000551691 CEBPZOSA8MTT3 80 aa1.86□□□□□ -2.11
LIMA1-208ENST00000551691 H3BQ15 152 aa1.86□□□□□ -2.11
LIMA1-208ENST00000551691 M0R378 163 aa1.86□□□□□ -2.11
LIMA1-208ENST00000551691 M0R3E3 92 aa1.86□□□□□ -2.11
LIMA1-208ENST00000551691 TIMM17BO60830 172 aa1.86□□□□□ -2.11
LIMA1-208ENST00000551691 ANGP03950 147 aaKnown RBP1.86□□□□□ -2.11
LIMA1-208ENST00000551691 NBEAP1P0C6P0 100 aa1.86□□□□□ -2.11
LIMA1-208ENST00000551691 KRTAP2-3P0C7H8 128 aa1.86□□□□□ -2.11
LIMA1-208ENST00000551691 Q0VG73 95 aa1.86□□□□□ -2.11
LIMA1-208ENST00000551691 CFAP126Q5VTH2 177 aa1.86□□□□□ -2.11
LIMA1-208ENST00000551691 PATE2Q6UY27 113 aa1.86□□□□□ -2.11
LIMA1-208ENST00000551691 Q6ZQT0 140 aa1.86□□□□□ -2.11
LIMA1-208ENST00000551691 C7orf65Q6ZTY9 151 aa1.86□□□□□ -2.11
LIMA1-208ENST00000551691 TP53RKQ96S44 253 aa1.86□□□□□ -2.11
LIMA1-208ENST00000551691 TRGV9Q99603 122 aa1.86□□□□□ -2.11
LIMA1-208ENST00000551691 SLC50A1Q9BRV3 221 aa1.86□□□□□ -2.11
LIMA1-208ENST00000551691 PDCD10Q9BUL8 212 aa1.86□□□□□ -2.11
LIMA1-208ENST00000551691 KRTAP2-4Q9BYR9 128 aa1.86□□□□□ -2.11
LIMA1-208ENST00000551691 FAM107BQ9H098 131 aa1.86□□□□□ -2.11
LIMA1-208ENST00000551691 PRO2289Q9P1D8 64 aa1.86□□□□□ -2.11
LIMA1-208ENST00000551691 TRAV16A0A0A6YYK6 109 aaPredicted RBP1.85□□□□□ -2.11
LIMA1-208ENST00000551691 LOC100130705A0A1B0GUX0 176 aa1.85□□□□□ -2.11
LIMA1-208ENST00000551691 TRBV6-4A0A1B0GX49 114 aa1.85□□□□□ -2.11
LIMA1-208ENST00000551691 A8MWV9 139 aa1.85□□□□□ -2.11
LIMA1-208ENST00000551691 M0R2P5 195 aa1.85□□□□□ -2.11
LIMA1-208ENST00000551691 BAALC-AS2P0C853 105 aa1.85□□□□□ -2.11
LIMA1-208ENST00000551691 LINC00694P0DN24 101 aa1.85□□□□□ -2.11
LIMA1-208ENST00000551691 BCL2P10415 239 aa1.85□□□□□ -2.11
LIMA1-208ENST00000551691 FABP2P12104 132 aa1.85□□□□□ -2.11
LIMA1-208ENST00000551691 RHOHQ15669 191 aa1.85□□□□□ -2.11
LIMA1-208ENST00000551691 NMSQ5H8A3 153 aa1.85□□□□□ -2.11
LIMA1-208ENST00000551691 SOSTDC1Q6X4U4 206 aa1.85□□□□□ -2.11
LIMA1-208ENST00000551691 LINC00269Q8N2A0 174 aa1.85□□□□□ -2.11
LIMA1-208ENST00000551691 LINC00526Q96FQ7 95 aa1.85□□□□□ -2.11
LIMA1-208ENST00000551691 NAT8BQ9UHF3 227 aa1.85□□□□□ -2.11
LIMA1-208ENST00000551691 AP4S1Q9Y587 144 aa1.85□□□□□ -2.11
LIMA1-208ENST00000551691 IGKV2-40A0A087WW87 121 aaPredicted RBP1.84□□□□□ -2.11
LIMA1-208ENST00000551691 EFCAB10A6NFE3 127 aa1.84□□□□□ -2.11
LIMA1-208ENST00000551691 IFITM5A6NNB3 132 aa1.84□□□□□ -2.11
LIMA1-208ENST00000551691 GABARAPH6UMI1 98 aa1.84□□□□□ -2.11
LIMA1-208ENST00000551691 HIST1H2BKO60814 126 aa1.84□□□□□ -2.11
LIMA1-208ENST00000551691 HYPMO75409 117 aa1.84□□□□□ -2.11
LIMA1-208ENST00000551691 IGKV2D-40P01614 121 aaPredicted RBP1.84□□□□□ -2.11
LIMA1-208ENST00000551691 CRPP02741 224 aa1.84□□□□□ -2.11
LIMA1-208ENST00000551691 HIST1H2BJP06899 126 aa1.84□□□□□ -2.11
LIMA1-208ENST00000551691 SCGB1A1P11684 91 aa1.84□□□□□ -2.11
LIMA1-208ENST00000551691 RPL7P18124 248 aaKnown RBP1.84□□□□□ -2.11
LIMA1-208ENST00000551691 S100A11P31949 105 aa1.84□□□□□ -2.11
LIMA1-208ENST00000551691 SDC2P34741 201 aa1.84□□□□□ -2.11
LIMA1-208ENST00000551691 AKR1C3P42330 323 aa1.84□□□□□ -2.11
LIMA1-208ENST00000551691 SMCO1Q147U7 214 aa1.84□□□□□ -2.11
LIMA1-208ENST00000551691 RNASE10Q5GAN6 216 aaKnown RBP1.84□□□□□ -2.11
LIMA1-208ENST00000551691 ODF3Q96PU9 254 aa1.84□□□□□ -2.11
LIMA1-208ENST00000551691 OR5AC2Q9NZP5 309 aa1.84□□□□□ -2.11
LIMA1-208ENST00000551691 PAIP2BQ9ULR5 123 aaKnown RBP1.84□□□□□ -2.11
LIMA1-208ENST00000551691 HIGD1AQ9Y241 93 aa1.84□□□□□ -2.11
LIMA1-208ENST00000551691 A0A087WWC5 75 aa1.83□□□□□ -2.12
LIMA1-208ENST00000551691 F8W036 122 aa1.83□□□□□ -2.12
LIMA1-208ENST00000551691 CXCL1P09341 107 aa1.83□□□□□ -2.12
LIMA1-208ENST00000551691 RPL35P42766 123 aaKnown RBP1.83□□□□□ -2.12
LIMA1-208ENST00000551691 HBBP68871 147 aa1.83□□□□□ -2.12
LIMA1-208ENST00000551691 KRTAP19-6Q3LI70 58 aa1.83□□□□□ -2.12
LIMA1-208ENST00000551691 PP632Q6XCG6 107 aa1.83□□□□□ -2.12
LIMA1-208ENST00000551691 OR5H6Q8NGV6 325 aa1.83□□□□□ -2.12
LIMA1-208ENST00000551691 TMEM126AQ9H061 195 aa1.83□□□□□ -2.12
LIMA1-208ENST00000551691 C14orf132Q9NPU4 83 aa1.83□□□□□ -2.12
LIMA1-208ENST00000551691 C3orf85A0A1B0GTC6 90 aa1.82□□□□□ -2.12
LIMA1-208ENST00000551691 TRDV1A0A1B0GX56 115 aa1.82□□□□□ -2.12
LIMA1-208ENST00000551691 IL5P05113 134 aa1.82□□□□□ -2.12
LIMA1-208ENST00000551691 IGLC2P0DOY2 106 aa1.82□□□□□ -2.12
LIMA1-208ENST00000551691 IAPPP10997 89 aa1.82□□□□□ -2.12
LIMA1-208ENST00000551691 PCOTHQ58A44 107 aa1.82□□□□□ -2.12
LIMA1-208ENST00000551691 C9orf116Q5BN46 136 aaPredicted RBP1.82□□□□□ -2.12
LIMA1-208ENST00000551691 IZUMO2Q6UXV1 221 aa1.82□□□□□ -2.12
LIMA1-208ENST00000551691 CYP2G1PQ6ZSU1 146 aa1.82□□□□□ -2.12
LIMA1-208ENST00000551691 RNASE11Q8TAA1 199 aaKnown RBP1.82□□□□□ -2.12
LIMA1-208ENST00000551691 TMEM254Q8TBM7 123 aa1.82□□□□□ -2.12
LIMA1-208ENST00000551691 BORCS5Q969J3 196 aa1.82□□□□□ -2.12
LIMA1-208ENST00000551691 LSM2Q9Y333 95 aaKnown RBP1.82□□□□□ -2.12
LIMA1-208ENST00000551691 U3KQ87 197 aa1.82□□□□□ -2.12
LIMA1-208ENST00000551691 LOC105371267A0A1B0GV96 52 aa1.81□□□□□ -2.12
LIMA1-208ENST00000551691 J3KT08 172 aa1.81□□□□□ -2.12
LIMA1-208ENST00000551691 LYRM1O43325 122 aa1.81□□□□□ -2.12
LIMA1-208ENST00000551691 CFDP00746 253 aaPredicted RBP1.81□□□□□ -2.12
LIMA1-208ENST00000551691 LINC00305Q7Z4B0 112 aa1.81□□□□□ -2.12
LIMA1-208ENST00000551691 PRR15Q8IV56 129 aa1.81□□□□□ -2.12
LIMA1-208ENST00000551691 CHCHD1Q96BP2 118 aaKnown RBP1.81□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms