RNA–Protein interactions for RNA: ENST00000551246.1

LSM3P2-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 2, humanhuman

BASIC

Gene LSM3P2, Length 273 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P2-201ENST00000551246 DEFB112Q30KQ8 113 aa3.43□□□□□ -1.86
LSM3P2-201ENST00000551246 LINC00208Q96KT6 92 aa3.43□□□□□ -1.86
LSM3P2-201ENST00000551246 ARRDC1-AS1Q9H2J1 176 aa3.43□□□□□ -1.86
LSM3P2-201ENST00000551246 SPTBN2O15020 2390 aa3.43□□□□□ -1.86
LSM3P2-201ENST00000551246 IGKV2-30P06310 120 aa3.42□□□□□ -1.86
LSM3P2-201ENST00000551246 GIG44P09565 113 aaPredicted RBP3.42□□□□□ -1.86
LSM3P2-201ENST00000551246 HTN1P15515 57 aa3.42□□□□□ -1.86
LSM3P2-201ENST00000551246 PRR15LQ9BU68 103 aa3.42□□□□□ -1.86
LSM3P2-201ENST00000551246 SPTBN1Q01082 2364 aaKnown RBP3.42□□□□□ -1.86
LSM3P2-201ENST00000551246 CEP250Q9BV73 2442 aa3.42□□□□□ -1.86
LSM3P2-201ENST00000551246 PCNX1Q96RV3 2341 aa3.42□□□□□ -1.86
LSM3P2-201ENST00000551246 LAMA2P24043 3122 aaKnown RBP3.41□□□□□ -1.86
LSM3P2-201ENST00000551246 CNOT1A5YKK6 2376 aaKnown RBP3.41□□□□□ -1.86
LSM3P2-201ENST00000551246 H3BUX3 64 aa3.41□□□□□ -1.86
LSM3P2-201ENST00000551246 KRTAP10-11P60412 298 aa3.41□□□□□ -1.86
LSM3P2-201ENST00000551246 HIGD2BQ4VC39 106 aa3.41□□□□□ -1.86
LSM3P2-201ENST00000551246 C9orf116Q5BN46 136 aaPredicted RBP3.41□□□□□ -1.86
LSM3P2-201ENST00000551246 Q8N377 158 aa3.41□□□□□ -1.86
LSM3P2-201ENST00000551246 TNRC18O15417 2968 aaPredicted RBP3.4□□□□□ -1.86
LSM3P2-201ENST00000551246 IGLV7-46A0A075B6I9 117 aa3.4□□□□□ -1.87
LSM3P2-201ENST00000551246 IGKV2D-24A0A075B6R9 120 aa3.4□□□□□ -1.87
LSM3P2-201ENST00000551246 A0A1W2PPR1 153 aa3.4□□□□□ -1.87
LSM3P2-201ENST00000551246 LY6EQ16553 131 aa3.4□□□□□ -1.87
LSM3P2-201ENST00000551246 C10orf99Q6UWK7 81 aa3.4□□□□□ -1.87
LSM3P2-201ENST00000551246 Q8NBF4 154 aa3.4□□□□□ -1.87
LSM3P2-201ENST00000551246 CUL9Q8IWT3 2517 aa3.4□□□□□ -1.87
LSM3P2-201ENST00000551246 FREM2Q5SZK8 3169 aa3.39□□□□□ -1.87
LSM3P2-201ENST00000551246 TRIOO75962 3097 aa3.39□□□□□ -1.87
LSM3P2-201ENST00000551246 KPRPQ5T749 579 aaPredicted RBP3.39□□□□□ -1.87
LSM3P2-201ENST00000551246 UNQ6190/PRO20217Q6UXQ8 127 aa3.39□□□□□ -1.87
LSM3P2-201ENST00000551246 PRR26Q8N8Z3 221 aa3.39□□□□□ -1.87
LSM3P2-201ENST00000551246 NKAPP1Q8N9T2 125 aa3.39□□□□□ -1.87
LSM3P2-201ENST00000551246 SPTSSBQ8NFR3 76 aa3.39□□□□□ -1.87
LSM3P2-201ENST00000551246 CHCHD10Q8WYQ3 142 aaPredicted RBP3.39□□□□□ -1.87
LSM3P2-201ENST00000551246 KRTAP17-1Q9BYP8 105 aa3.39□□□□□ -1.87
LSM3P2-201ENST00000551246 LAMA1P25391 3075 aa3.39□□□□□ -1.87
LSM3P2-201ENST00000551246 VPS13AQ96RL7 3174 aa3.39□□□□□ -1.87
LSM3P2-201ENST00000551246 CFAP54Q96N23 3096 aa3.38□□□□□ -1.87
LSM3P2-201ENST00000551246 SPEGQ15772 3267 aa3.38□□□□□ -1.87
LSM3P2-201ENST00000551246 IGKV3OR2-268A0A0C4DH90 116 aa3.38□□□□□ -1.87
LSM3P2-201ENST00000551246 A6NED7 52 aa3.38□□□□□ -1.87
LSM3P2-201ENST00000551246 BRD3OSQ6XYD6 125 aa3.38□□□□□ -1.87
LSM3P2-201ENST00000551246 C16orf74Q96GX8 76 aa3.38□□□□□ -1.87
LSM3P2-201ENST00000551246 NOP10Q9NPE3 64 aaKnown RBP3.38□□□□□ -1.87
LSM3P2-201ENST00000551246 CDH23Q9H251 3354 aa3.38□□□□□ -1.87
LSM3P2-201ENST00000551246 TPRP12270 2363 aaKnown RBP3.38□□□□□ -1.87
LSM3P2-201ENST00000551246 GPR179Q6PRD1 2367 aa3.38□□□□□ -1.87
LSM3P2-201ENST00000551246 FRYLO94915 3013 aa3.38□□□□□ -1.87
LSM3P2-201ENST00000551246 CR1P17927 2039 aa3.37□□□□□ -1.87
LSM3P2-201ENST00000551246 CFAP47Q6ZTR5 3102 aa3.37□□□□□ -1.87
LSM3P2-201ENST00000551246 INAFM1C9JVW0 142 aa3.37□□□□□ -1.87
LSM3P2-201ENST00000551246 K7EQZ3 153 aa3.37□□□□□ -1.87
LSM3P2-201ENST00000551246 MP68P56378 58 aa3.37□□□□□ -1.87
LSM3P2-201ENST00000551246 PRR4Q16378 134 aa3.37□□□□□ -1.87
LSM3P2-201ENST00000551246 LINC01554Q52M75 96 aa3.37□□□□□ -1.87
LSM3P2-201ENST00000551246 COA5Q86WW8 74 aa3.37□□□□□ -1.87
LSM3P2-201ENST00000551246 C6orf48Q9UBA6 75 aa3.37□□□□□ -1.87
LSM3P2-201ENST00000551246 WDFY3Q8IZQ1 3526 aa3.37□□□□□ -1.87
LSM3P2-201ENST00000551246 CYSRT1A8MQ03 144 aa3.36□□□□□ -1.87
LSM3P2-201ENST00000551246 KRTAP4-16G5E9R7 235 aaPredicted RBP3.36□□□□□ -1.87
LSM3P2-201ENST00000551246 PRB1P04280 392 aa3.36□□□□□ -1.87
LSM3P2-201ENST00000551246 LINC00313P59037 77 aa3.36□□□□□ -1.87
LSM3P2-201ENST00000551246 SPAG11BQ08648 103 aa3.36□□□□□ -1.87
LSM3P2-201ENST00000551246 LCE1AQ5T7P2 110 aa3.36□□□□□ -1.87
LSM3P2-201ENST00000551246 ZNF702PQ9H963 129 aa3.36□□□□□ -1.87
LSM3P2-201ENST00000551246 RP1L1Q8IWN7 2480 aaPredicted RBP3.35□□□□□ -1.87
LSM3P2-201ENST00000551246 DSPP15924 2871 aaKnown RBP3.35□□□□□ -1.87
LSM3P2-201ENST00000551246 IGLV5-37A0A075B6J1 123 aa3.35□□□□□ -1.87
LSM3P2-201ENST00000551246 RTL8CO15255 209 aa3.35□□□□□ -1.87
LSM3P2-201ENST00000551246 SPRR1AP35321 89 aa3.35□□□□□ -1.87
LSM3P2-201ENST00000551246 SPINK7P58062 85 aa3.35□□□□□ -1.87
LSM3P2-201ENST00000551246 C18orf65Q6ZTR6 163 aa3.35□□□□□ -1.87
LSM3P2-201ENST00000551246 WFDC10AQ9H1F0 79 aa3.35□□□□□ -1.87
LSM3P2-201ENST00000551246 PRO3102Q9H379 93 aa3.35□□□□□ -1.87
LSM3P2-201ENST00000551246 PRR34Q9NV39 138 aa3.35□□□□□ -1.87
LSM3P2-201ENST00000551246 WNK1Q9H4A3 2382 aa3.35□□□□□ -1.87
LSM3P2-201ENST00000551246 APC2O95996 2303 aa3.35□□□□□ -1.87
LSM3P2-201ENST00000551246 IGLV8-61A0A075B6I0 122 aa3.34□□□□□ -1.87
LSM3P2-201ENST00000551246 CMC4P56277 68 aaPredicted RBP3.34□□□□□ -1.87
LSM3P2-201ENST00000551246 SERTAD4-AS1Q5TG53 156 aa3.34□□□□□ -1.87
LSM3P2-201ENST00000551246 CACNA1HO95180 2353 aa3.34□□□□□ -1.87
LSM3P2-201ENST00000551246 MAP1BP46821 2468 aaKnown RBP3.34□□□□□ -1.88
LSM3P2-201ENST00000551246 PRUNE2Q8WUY3 3088 aa3.34□□□□□ -1.88
LSM3P2-201ENST00000551246 H0Y9P7 68 aa3.33□□□□□ -1.88
LSM3P2-201ENST00000551246 REG3AQ06141 175 aa3.33□□□□□ -1.88
LSM3P2-201ENST00000551246 EGFEM1PQ0D2K5 195 aa3.33□□□□□ -1.88
LSM3P2-201ENST00000551246 C1orf137Q5JT78 98 aa3.33□□□□□ -1.88
LSM3P2-201ENST00000551246 KRTAP26-1Q6PEX3 210 aa3.33□□□□□ -1.88
LSM3P2-201ENST00000551246 CASC2Q6XLA1 102 aa3.33□□□□□ -1.88
LSM3P2-201ENST00000551246 Q8NAQ8 132 aa3.33□□□□□ -1.88
LSM3P2-201ENST00000551246 C4orf3Q8WVX3 66 aa3.33□□□□□ -1.88
LSM3P2-201ENST00000551246 ANKHD1Q8IWZ3 2542 aaKnown RBP3.32□□□□□ -1.88
LSM3P2-201ENST00000551246 KALRNO60229 2985 aa3.32□□□□□ -1.88
LSM3P2-201ENST00000551246 IGLV1-50A0A075B6I6 118 aa3.32□□□□□ -1.88
LSM3P2-201ENST00000551246 C7orf33Q8WU49 177 aa3.32□□□□□ -1.88
LSM3P2-201ENST00000551246 PRAC1Q96KF2 57 aa3.32□□□□□ -1.88
LSM3P2-201ENST00000551246 DHRS4-AS1Q9P1J3 65 aa3.32□□□□□ -1.88
LSM3P2-201ENST00000551246 SORL1Q92673 2214 aa3.32□□□□□ -1.88
LSM3P2-201ENST00000551246 EP300Q09472 2414 aaPredicted RBP3.32□□□□□ -1.88
LSM3P2-201ENST00000551246 ABCA2Q9BZC7 2435 aa3.32□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 82.6 ms