RNA–Protein interactions for RNA: ENST00000550647.5

RAB3IP-213, Transcript of RAB3A interacting protein, humanhuman

TSL 3

Gene RAB3IP, Length 742 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-213ENST00000550647 SPANXN1Q5VSR9 72 aa2.27□□□□□ -2.05
RAB3IP-213ENST00000550647 KRTAP5-2Q701N4 177 aa2.27□□□□□ -2.05
RAB3IP-213ENST00000550647 KTN1-AS1Q86SY8 53 aa2.27□□□□□ -2.05
RAB3IP-213ENST00000550647 NUP35Q8NFH5 326 aa2.27□□□□□ -2.05
RAB3IP-213ENST00000550647 SCGB3A1Q96QR1 104 aa2.27□□□□□ -2.05
RAB3IP-213ENST00000550647 TIMM21Q9BVV7 248 aa2.27□□□□□ -2.05
RAB3IP-213ENST00000550647 NOP10Q9NPE3 64 aaKnown RBP2.27□□□□□ -2.05
RAB3IP-213ENST00000550647 SMCO4Q9NRQ5 59 aa2.27□□□□□ -2.05
RAB3IP-213ENST00000550647 TRGV2A0A075B6R0 118 aa2.26□□□□□ -2.05
RAB3IP-213ENST00000550647 TRGV1A0A0A0MS02 117 aa2.26□□□□□ -2.05
RAB3IP-213ENST00000550647 A0A1B0GUT8 65 aa2.26□□□□□ -2.05
RAB3IP-213ENST00000550647 DEFB4AO15263 64 aa2.26□□□□□ -2.05
RAB3IP-213ENST00000550647 SPINK4O60575 86 aa2.26□□□□□ -2.05
RAB3IP-213ENST00000550647 PPBPP02775 128 aa2.26□□□□□ -2.05
RAB3IP-213ENST00000550647 S100A8P05109 93 aa2.26□□□□□ -2.05
RAB3IP-213ENST00000550647 TRGC1P0CF51 173 aa2.26□□□□□ -2.05
RAB3IP-213ENST00000550647 SMIM17P0DL12 118 aa2.26□□□□□ -2.05
RAB3IP-213ENST00000550647 TMEM258P61165 79 aa2.26□□□□□ -2.05
RAB3IP-213ENST00000550647 MRPL54Q6P161 138 aaKnown RBP2.26□□□□□ -2.05
RAB3IP-213ENST00000550647 SMIM15Q7Z3B0 74 aa2.26□□□□□ -2.05
RAB3IP-213ENST00000550647 OR10AG1Q8NH19 301 aa2.26□□□□□ -2.05
RAB3IP-213ENST00000550647 AP1S3Q96PC3 154 aa2.26□□□□□ -2.05
RAB3IP-213ENST00000550647 CNFNQ9BYD5 112 aa2.26□□□□□ -2.05
RAB3IP-213ENST00000550647 DYNC2H1Q8NCM8 4307 aaKnown RBP2.26□□□□□ -2.05
RAB3IP-213ENST00000550647 A8MWV9 139 aa2.25□□□□□ -2.05
RAB3IP-213ENST00000550647 J3QQQ9 107 aa2.25□□□□□ -2.05
RAB3IP-213ENST00000550647 DEFB130BP0DP73 79 aa2.25□□□□□ -2.05
RAB3IP-213ENST00000550647 DEFB130AP0DP74 79 aa2.25□□□□□ -2.05
RAB3IP-213ENST00000550647 RAB4BP61018 213 aa2.25□□□□□ -2.05
RAB3IP-213ENST00000550647 HBBP68871 147 aa2.25□□□□□ -2.05
RAB3IP-213ENST00000550647 ELOBQ15370 118 aa2.25□□□□□ -2.05
RAB3IP-213ENST00000550647 LCA10Q71F78 164 aa2.25□□□□□ -2.05
RAB3IP-213ENST00000550647 SPACA4Q8TDM5 124 aa2.25□□□□□ -2.05
RAB3IP-213ENST00000550647 DPH3P1Q9H4G8 78 aa2.25□□□□□ -2.05
RAB3IP-213ENST00000550647 PLECQ15149 4684 aaKnown RBP2.24□□□□□ -2.05
RAB3IP-213ENST00000550647 MT-ND6P03923 174 aa2.24□□□□□ -2.05
RAB3IP-213ENST00000550647 MGPP08493 103 aa2.24□□□□□ -2.05
RAB3IP-213ENST00000550647 HTN3P15516 51 aa2.24□□□□□ -2.05
RAB3IP-213ENST00000550647 EVI2AP22794 236 aa2.24□□□□□ -2.05
RAB3IP-213ENST00000550647 ZNF56Q15929 161 aa2.24□□□□□ -2.05
RAB3IP-213ENST00000550647 LINC01554Q52M75 96 aa2.24□□□□□ -2.05
RAB3IP-213ENST00000550647 FAM74A4Q5TZK3 123 aa2.24□□□□□ -2.05
RAB3IP-213ENST00000550647 CFAP126Q5VTH2 177 aa2.24□□□□□ -2.05
RAB3IP-213ENST00000550647 TMEM191AQ9H0A3 160 aa2.24□□□□□ -2.05
RAB3IP-213ENST00000550647 STARD9Q9P2P6 4700 aa2.23□□□□□ -2.05
RAB3IP-213ENST00000550647 TRAV10A0A0B4J240 114 aa2.23□□□□□ -2.05
RAB3IP-213ENST00000550647 TRBV10-1A0A0K0K1A3 114 aa2.23□□□□□ -2.05
RAB3IP-213ENST00000550647 TRBV6-4A0A1B0GX49 114 aa2.23□□□□□ -2.05
RAB3IP-213ENST00000550647 PPP1R17O96001 155 aa2.23□□□□□ -2.05
RAB3IP-213ENST00000550647 P0DMU3 169 aa2.23□□□□□ -2.05
RAB3IP-213ENST00000550647 FAM231AP0DMU4 169 aa2.23□□□□□ -2.05
RAB3IP-213ENST00000550647 FAM231CP0DMU5 169 aa2.23□□□□□ -2.05
RAB3IP-213ENST00000550647 CKS2P33552 79 aa2.23□□□□□ -2.05
RAB3IP-213ENST00000550647 RHOHQ15669 191 aa2.23□□□□□ -2.05
RAB3IP-213ENST00000550647 LCE1CQ5T751 118 aa2.23□□□□□ -2.05
RAB3IP-213ENST00000550647 LCE1BQ5T7P3 118 aa2.23□□□□□ -2.05
RAB3IP-213ENST00000550647 PRADC1Q9BSG0 188 aa2.23□□□□□ -2.05
RAB3IP-213ENST00000550647 PRO0255Q9UI72 69 aa2.23□□□□□ -2.05
RAB3IP-213ENST00000550647 STAB2Q8WWQ8 2551 aa2.23□□□□□ -2.05
RAB3IP-213ENST00000550647 TENM3Q9P273 2699 aa2.22□□□□□ -2.05
RAB3IP-213ENST00000550647 DEFB131BA0A096LNP1 70 aa2.22□□□□□ -2.05
RAB3IP-213ENST00000550647 A0A0J9YY99 117 aa2.22□□□□□ -2.05
RAB3IP-213ENST00000550647 D6R8Y8 96 aa2.22□□□□□ -2.05
RAB3IP-213ENST00000550647 M0QY20 66 aa2.22□□□□□ -2.05
RAB3IP-213ENST00000550647 NCR2O95944 276 aa2.22□□□□□ -2.05
RAB3IP-213ENST00000550647 CRYBA4P53673 196 aa2.22□□□□□ -2.05
RAB3IP-213ENST00000550647 HIST3H2BBQ8N257 126 aa2.22□□□□□ -2.05
RAB3IP-213ENST00000550647 SREK1IP1Q8N9Q2 155 aaPredicted RBP2.22□□□□□ -2.05
RAB3IP-213ENST00000550647 PRELID3AQ96N28 172 aa2.22□□□□□ -2.05
RAB3IP-213ENST00000550647 IMUPQ9GZP8 106 aa2.22□□□□□ -2.05
RAB3IP-213ENST00000550647 LAMTOR2Q9Y2Q5 125 aa2.22□□□□□ -2.05
RAB3IP-213ENST00000550647 TRBV7-3A0A075B6L6 115 aa2.21□□□□□ -2.06
RAB3IP-213ENST00000550647 TRBV6-5A0A0K0K1A5 114 aa2.21□□□□□ -2.06
RAB3IP-213ENST00000550647 NUPR2A6NF83 97 aa2.21□□□□□ -2.06
RAB3IP-213ENST00000550647 C1orf196B1AJZ1 125 aa2.21□□□□□ -2.06
RAB3IP-213ENST00000550647 IBA57-AS1B1ANH7 110 aa2.21□□□□□ -2.06
RAB3IP-213ENST00000550647 H3BNG1 76 aa2.21□□□□□ -2.06
RAB3IP-213ENST00000550647 TCL1BO95988 128 aa2.21□□□□□ -2.06
RAB3IP-213ENST00000550647 TRGC2P03986 189 aa2.21□□□□□ -2.06
RAB3IP-213ENST00000550647 G0S2P27469 103 aa2.21□□□□□ -2.06
RAB3IP-213ENST00000550647 SRIP30626 198 aa2.21□□□□□ -2.06
RAB3IP-213ENST00000550647 LYRM7Q5U5X0 104 aa2.21□□□□□ -2.06
RAB3IP-213ENST00000550647 C10orf126Q8N4M7 172 aa2.21□□□□□ -2.06
RAB3IP-213ENST00000550647 C9orf163Q8N9P6 203 aa2.21□□□□□ -2.06
RAB3IP-213ENST00000550647 C15orf53Q8NAA6 179 aa2.21□□□□□ -2.06
RAB3IP-213ENST00000550647 RPL39LQ96EH5 51 aaKnown RBP2.21□□□□□ -2.06
RAB3IP-213ENST00000550647 C20orf78Q9BR46 151 aa2.21□□□□□ -2.06
RAB3IP-213ENST00000550647 ST20Q9HBF5 79 aa2.21□□□□□ -2.06
RAB3IP-213ENST00000550647 NIT2Q9NQR4 276 aa2.21□□□□□ -2.06
RAB3IP-213ENST00000550647 MUC4Q99102 2169 aa2.2□□□□□ -2.06
RAB3IP-213ENST00000550647 COL7A1Q02388 2944 aa2.2□□□□□ -2.06
RAB3IP-213ENST00000550647 A0A096LPF7 62 aa2.2□□□□□ -2.06
RAB3IP-213ENST00000550647 TRBV27A0A0K0K1C4 114 aa2.2□□□□□ -2.06
RAB3IP-213ENST00000550647 I3L3M4 83 aa2.2□□□□□ -2.06
RAB3IP-213ENST00000550647 LINC00694P0DN24 101 aa2.2□□□□□ -2.06
RAB3IP-213ENST00000550647 POLR2KP53803 58 aaKnown RBP2.2□□□□□ -2.06
RAB3IP-213ENST00000550647 TCTAP57738 103 aa2.2□□□□□ -2.06
RAB3IP-213ENST00000550647 UBE2D3P61077 147 aa2.2□□□□□ -2.06
RAB3IP-213ENST00000550647 UBE2D2P62837 147 aa2.2□□□□□ -2.06
RAB3IP-213ENST00000550647 Q8N8P6 123 aa2.2□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms