RNA–Protein interactions for RNA: ENST00000550173.1

SLC38A1-208, Transcript of solute carrier family 38 member 1, human

TSL 5

Gene SLC38A1, Length 891 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SLC38A1-208	ENST00000550173	RETNLB	Q9BQ08	111 aa		11.57	□□□□□ -0.56
SLC38A1-208	ENST00000550173		A0A0U1RQV1	116 aa		11.55	□□□□□ -0.56
SLC38A1-208	ENST00000550173	CHTOP	Q9Y3Y2	248 aa	Known RBP	11.55	□□□□□ -0.56
SLC38A1-208	ENST00000550173	MUC2	Q02817	5179 aa		11.54	□□□□□ -0.56
SLC38A1-208	ENST00000550173	LINC00158	P58513	81 aa		11.54	□□□□□ -0.56
SLC38A1-208	ENST00000550173	CBLN2	Q8IUK8	224 aa		11.54	□□□□□ -0.56
SLC38A1-208	ENST00000550173	PLEKHB2	Q96CS7	222 aa		11.54	□□□□□ -0.56
SLC38A1-208	ENST00000550173		A0A0U1RRA0	63 aa		11.52	□□□□□ -0.57
SLC38A1-208	ENST00000550173	HIGD2A	Q9BW72	106 aa		11.52	□□□□□ -0.57
SLC38A1-208	ENST00000550173	APOC3	P02656	99 aa		11.51	□□□□□ -0.57
SLC38A1-208	ENST00000550173	C3orf22	Q8N5N4	141 aa		11.5	□□□□□ -0.57
SLC38A1-208	ENST00000550173	TMEM223	A0PJW6	202 aa		11.49	□□□□□ -0.57
SLC38A1-208	ENST00000550173	ATP6V1G1	O75348	118 aa		11.48	□□□□□ -0.57
SLC38A1-208	ENST00000550173	CTAG1A	P78358	180 aa		11.48	□□□□□ -0.57
SLC38A1-208	ENST00000550173	TRAV12-1	A0A0B4J245	112 aa		11.47	□□□□□ -0.57
SLC38A1-208	ENST00000550173	SNAPIN	O95295	136 aa		11.47	□□□□□ -0.57
SLC38A1-208	ENST00000550173	IFI27L1	Q96BM0	104 aa		11.47	□□□□□ -0.57
SLC38A1-208	ENST00000550173	IGLV7-46	A0A075B6I9	117 aa		11.46	□□□□□ -0.57
SLC38A1-208	ENST00000550173	SMIM13	P0DJ93	91 aa		11.46	□□□□□ -0.57
SLC38A1-208	ENST00000550173	NDUFA5	Q16718	116 aa		11.46	□□□□□ -0.57
SLC38A1-208	ENST00000550173	CDIP1	Q9H305	208 aa		11.46	□□□□□ -0.57
SLC38A1-208	ENST00000550173	TPRXL	Q17RH7	258 aa		11.45	□□□□□ -0.58
SLC38A1-208	ENST00000550173	MEIG1	Q5JSS6	88 aa		11.45	□□□□□ -0.58
SLC38A1-208	ENST00000550173	SVBP	Q8N300	66 aa		11.45	□□□□□ -0.58
SLC38A1-208	ENST00000550173	CHCHD1	Q96BP2	118 aa	Known RBP	11.45	□□□□□ -0.58
SLC38A1-208	ENST00000550173	SPRR4	Q96PI1	79 aa		11.45	□□□□□ -0.58
SLC38A1-208	ENST00000550173	BOD1L2	Q8IYS8	172 aa		11.44	□□□□□ -0.58
SLC38A1-208	ENST00000550173	PRY	O14603	147 aa		11.42	□□□□□ -0.58
SLC38A1-208	ENST00000550173	NCR3	O14931	201 aa		11.42	□□□□□ -0.58
SLC38A1-208	ENST00000550173	MIR7-3HG	Q8N6C7	128 aa		11.42	□□□□□ -0.58
SLC38A1-208	ENST00000550173	ZNF706	Q9Y5V0	76 aa	Predicted RBP	11.42	□□□□□ -0.58
SLC38A1-208	ENST00000550173	HERV-K104	P63124	156 aa		11.41	□□□□□ -0.58
SLC38A1-208	ENST00000550173	SPAG11A	Q6PDA7	123 aa		11.41	□□□□□ -0.58
SLC38A1-208	ENST00000550173	C4orf48	Q5BLP8	95 aa		11.39	□□□□□ -0.59
SLC38A1-208	ENST00000550173	YPEL4	Q96NS1	127 aa		11.39	□□□□□ -0.59
SLC38A1-208	ENST00000550173	PPDPF	Q9H3Y8	114 aa		11.39	□□□□□ -0.59
SLC38A1-208	ENST00000550173	LINC00587	B1AMM8	73 aa		11.38	□□□□□ -0.59
SLC38A1-208	ENST00000550173	FAM19A2	Q8N3H0	131 aa		11.38	□□□□□ -0.59
SLC38A1-208	ENST00000550173	LINC00337	Q8N6G1	96 aa		11.38	□□□□□ -0.59
SLC38A1-208	ENST00000550173	KCNQ1DN	Q9H478	68 aa		11.38	□□□□□ -0.59
SLC38A1-208	ENST00000550173	NDUFA12	Q9UI09	145 aa		11.38	□□□□□ -0.59
SLC38A1-208	ENST00000550173	ETDC	A0A1B0GVM5	59 aa		11.37	□□□□□ -0.59
SLC38A1-208	ENST00000550173	HSBP1	O75506	76 aa		11.37	□□□□□ -0.59
SLC38A1-208	ENST00000550173	SPRR1A	P35321	89 aa		11.37	□□□□□ -0.59
SLC38A1-208	ENST00000550173	SMCR5	Q8TEV8	140 aa		11.37	□□□□□ -0.59
SLC38A1-208	ENST00000550173	MYMX	A0A1B0GTQ4	84 aa		11.36	□□□□□ -0.59
SLC38A1-208	ENST00000550173		H0Y8G0	127 aa		11.36	□□□□□ -0.59
SLC38A1-208	ENST00000550173	MAP1LC3C	Q9BXW4	147 aa		11.36	□□□□□ -0.59
SLC38A1-208	ENST00000550173	TRBV10-3	A0A0K0K1G6	114 aa		11.35	□□□□□ -0.59
SLC38A1-208	ENST00000550173	SLC7A5P1	Q8MH63	180 aa		11.35	□□□□□ -0.59
SLC38A1-208	ENST00000550173	DAND5	Q8N907	189 aa		11.35	□□□□□ -0.59
SLC38A1-208	ENST00000550173		Q8NBF4	154 aa		11.34	□□□□□ -0.59
SLC38A1-208	ENST00000550173	KRTAP4-16	G5E9R7	235 aa	Predicted RBP	11.33	□□□□□ -0.6
SLC38A1-208	ENST00000550173	S100A12	P80511	92 aa		11.32	□□□□□ -0.6
SLC38A1-208	ENST00000550173	LCE2A	Q5TA79	106 aa	Predicted RBP	11.31	□□□□□ -0.6
SLC38A1-208	ENST00000550173	FP248	Q71RG6	208 aa	Predicted RBP	11.31	□□□□□ -0.6
SLC38A1-208	ENST00000550173	LEPROT	O15243	131 aa		11.3	□□□□□ -0.6
SLC38A1-208	ENST00000550173	TSPEAR-AS2	P59090	65 aa		11.3	□□□□□ -0.6
SLC38A1-208	ENST00000550173	LEPROTL1	O95214	131 aa		11.29	□□□□□ -0.6
SLC38A1-208	ENST00000550173	GAGE2A	Q6NT46	116 aa		11.29	□□□□□ -0.6
SLC38A1-208	ENST00000550173	MUC17	Q685J3	4493 aa		11.29	□□□□□ -0.6
SLC38A1-208	ENST00000550173	FAT4	Q6V0I7	4981 aa		11.28	□□□□□ -0.6
SLC38A1-208	ENST00000550173	LOC107984156	A0A0G2JMH3	177 aa		11.27	□□□□□ -0.61
SLC38A1-208	ENST00000550173		B5MCH6	92 aa		11.27	□□□□□ -0.61
SLC38A1-208	ENST00000550173	SPINK1	P00995	79 aa		11.27	□□□□□ -0.61
SLC38A1-208	ENST00000550173	TRGC2	P03986	189 aa		11.27	□□□□□ -0.61
SLC38A1-208	ENST00000550173	DDT	P30046	118 aa		11.27	□□□□□ -0.61
SLC38A1-208	ENST00000550173	LINC00483	Q53H64	154 aa		11.27	□□□□□ -0.61
SLC38A1-208	ENST00000550173	ARL17A	Q8IVW1	177 aa		11.27	□□□□□ -0.61
SLC38A1-208	ENST00000550173	SERF1A	O75920	110 aa		11.26	□□□□□ -0.61
SLC38A1-208	ENST00000550173	PLN	P26678	52 aa		11.26	□□□□□ -0.61
SLC38A1-208	ENST00000550173	KRTAP9-2	Q9BYQ4	174 aa		11.26	□□□□□ -0.61
SLC38A1-208	ENST00000550173	TRBV10-2	A0A0K0K1G8	114 aa		11.25	□□□□□ -0.61
SLC38A1-208	ENST00000550173		J3QQQ9	107 aa		11.25	□□□□□ -0.61
SLC38A1-208	ENST00000550173	ERC2-IT1	O76042	136 aa		11.25	□□□□□ -0.61
SLC38A1-208	ENST00000550173	IGLV9-49	A0A0B4J1Y8	123 aa		11.24	□□□□□ -0.61
SLC38A1-208	ENST00000550173	LINC00310	P59036	64 aa		11.24	□□□□□ -0.61
SLC38A1-208	ENST00000550173	HERVK_113	P61574	105 aa		11.24	□□□□□ -0.61
SLC38A1-208	ENST00000550173	MIEN1	Q9BRT3	115 aa		11.24	□□□□□ -0.61
SLC38A1-208	ENST00000550173	DPM2	O94777	84 aa		11.23	□□□□□ -0.61
SLC38A1-208	ENST00000550173	FABP4	P15090	132 aa		11.23	□□□□□ -0.61
SLC38A1-208	ENST00000550173	MOBP	Q13875	183 aa		11.23	□□□□□ -0.61
SLC38A1-208	ENST00000550173	KRTAP13-3	Q3SY46	172 aa		11.23	□□□□□ -0.61
SLC38A1-208	ENST00000550173	PMCHL2	Q9BQD1	86 aa		11.23	□□□□□ -0.61
SLC38A1-208	ENST00000550173	SPANXB1	Q9NS25	103 aa	Predicted RBP	11.23	□□□□□ -0.61
SLC38A1-208	ENST00000550173	LGALS3	P17931	250 aa	Known RBP	11.22	□□□□□ -0.61
SLC38A1-208	ENST00000550173	NMU	P48645	174 aa		11.22	□□□□□ -0.61
SLC38A1-208	ENST00000550173	HSPB8	Q9UJY1	196 aa		11.22	□□□□□ -0.61
SLC38A1-208	ENST00000550173	S100A7L2	Q5SY68	101 aa		11.21	□□□□□ -0.61
SLC38A1-208	ENST00000550173		Q6ZRX8	168 aa		11.21	□□□□□ -0.61
SLC38A1-208	ENST00000550173	SSBP3-AS1	Q7Z2R9	100 aa		11.21	□□□□□ -0.61
SLC38A1-208	ENST00000550173		Q9BRP9	147 aa		11.21	□□□□□ -0.61
SLC38A1-208	ENST00000550173	IGKC	P01834	107 aa		11.2	□□□□□ -0.62
SLC38A1-208	ENST00000550173	NDUFC2	O95298	119 aa		11.19	□□□□□ -0.62
SLC38A1-208	ENST00000550173	IGLV6-57	P01721	117 aa		11.18	□□□□□ -0.62
SLC38A1-208	ENST00000550173	S100A1	P23297	94 aa		11.18	□□□□□ -0.62
SLC38A1-208	ENST00000550173	TRAV23DV6	A0A075B6W5	121 aa		11.16	□□□□□ -0.62
SLC38A1-208	ENST00000550173	NPC2	P61916	151 aa		11.16	□□□□□ -0.62
SLC38A1-208	ENST00000550173	RPS29	P62273	56 aa	Known RBP	11.16	□□□□□ -0.62
SLC38A1-208	ENST00000550173	JOSD1	Q15040	202 aa	Predicted RBP	11.16	□□□□□ -0.62

Retrieved 100 of 20,778 RNA–protein pairs in 153.8 ms