RNA–Protein interactions for RNA: ENST00000549308.5

PTPRR-209, Transcript of protein tyrosine phosphatase, receptor type R, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRR, Length 1,603 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRR-209ENST00000549308 A0A1B0GV90 55 aa7.83□□□□□ -1.16
PTPRR-209ENST00000549308 H3BUT2 72 aa7.83□□□□□ -1.16
PTPRR-209ENST00000549308 H7C2G1 150 aa7.83□□□□□ -1.16
PTPRR-209ENST00000549308 RPL13AP40429 203 aaKnown RBP7.83□□□□□ -1.16
PTPRR-209ENST00000549308 Q1RN00 199 aa7.83□□□□□ -1.16
PTPRR-209ENST00000549308 TRAV13-2A0A0B4J235 113 aa7.82□□□□□ -1.16
PTPRR-209ENST00000549308 NDUFC2O95298 119 aa7.82□□□□□ -1.16
PTPRR-209ENST00000549308 TSPAN13O95857 204 aa7.82□□□□□ -1.16
PTPRR-209ENST00000549308 GAGE2BQ13066 116 aa7.82□□□□□ -1.16
PTPRR-209ENST00000549308 IGKV2-28A0A075B6P5 120 aa7.81□□□□□ -1.16
PTPRR-209ENST00000549308 IGKV2D-28P01615 120 aa7.81□□□□□ -1.16
PTPRR-209ENST00000549308 LCE6AA0A183 80 aa7.81□□□□□ -1.16
PTPRR-209ENST00000549308 NCR3O14931 201 aa7.81□□□□□ -1.16
PTPRR-209ENST00000549308 OR13C6PQ8NH95 151 aa7.81□□□□□ -1.16
PTPRR-209ENST00000549308 PRR3P79522 188 aaKnown RBP7.8□□□□□ -1.16
PTPRR-209ENST00000549308 C9orf129Q5T035 196 aaKnown RBP7.8□□□□□ -1.16
PTPRR-209ENST00000549308 LINC00337Q8N6G1 96 aa7.8□□□□□ -1.16
PTPRR-209ENST00000549308 Q8NDZ9 215 aa7.8□□□□□ -1.16
PTPRR-209ENST00000549308 DNAH6Q9C0G6 4158 aa7.79□□□□□ -1.16
PTPRR-209ENST00000549308 PSMB2P49721 201 aa7.79□□□□□ -1.16
PTPRR-209ENST00000549308 PKIGQ9Y2B9 76 aa7.79□□□□□ -1.16
PTPRR-209ENST00000549308 DNAH10Q8IVF4 4471 aa7.79□□□□□ -1.16
PTPRR-209ENST00000549308 A0A1W2PPM0 123 aa7.78□□□□□ -1.16
PTPRR-209ENST00000549308 TNP2Q05952 138 aa7.78□□□□□ -1.16
PTPRR-209ENST00000549308 C9orf163Q8N9P6 203 aa7.78□□□□□ -1.16
PTPRR-209ENST00000549308 RTL8CO15255 209 aa7.78□□□□□ -1.16
PTPRR-209ENST00000549308 VAMP3Q15836 100 aa7.78□□□□□ -1.16
PTPRR-209ENST00000549308 VPREB1P12018 145 aa7.77□□□□□ -1.17
PTPRR-209ENST00000549308 FABP2P12104 132 aa7.77□□□□□ -1.17
PTPRR-209ENST00000549308 S100A7L2Q5SY68 101 aa7.77□□□□□ -1.17
PTPRR-209ENST00000549308 A0A096LNI7 61 aa7.76□□□□□ -1.17
PTPRR-209ENST00000549308 IGKV2-24A0A0C4DH68 120 aa7.76□□□□□ -1.17
PTPRR-209ENST00000549308 TRBV10-2A0A0K0K1G8 114 aa7.76□□□□□ -1.17
PTPRR-209ENST00000549308 C16orf90A8MZG2 172 aa7.76□□□□□ -1.17
PTPRR-209ENST00000549308 SCGB1C2P0DMR2 95 aa7.76□□□□□ -1.17
PTPRR-209ENST00000549308 LINC01620Q4KN68 170 aa7.75□□□□□ -1.17
PTPRR-209ENST00000549308 LYRM7Q5U5X0 104 aa7.75□□□□□ -1.17
PTPRR-209ENST00000549308 NKAPP1Q8N9T2 125 aa7.75□□□□□ -1.17
PTPRR-209ENST00000549308 TMEM126AQ9H061 195 aa7.75□□□□□ -1.17
PTPRR-209ENST00000549308 PLA2G2DQ9UNK4 145 aa7.75□□□□□ -1.17
PTPRR-209ENST00000549308 IGLV5-52A0A0A0MRZ9 124 aa7.74□□□□□ -1.17
PTPRR-209ENST00000549308 M0R378 163 aa7.74□□□□□ -1.17
PTPRR-209ENST00000549308 SERTAD4-AS1Q5TG53 156 aa7.74□□□□□ -1.17
PTPRR-209ENST00000549308 KMT2AQ03164 3969 aa7.74□□□□□ -1.17
PTPRR-209ENST00000549308 FAM168BA1KXE4 195 aa7.74□□□□□ -1.17
PTPRR-209ENST00000549308 TRIAP1O43715 76 aa7.74□□□□□ -1.17
PTPRR-209ENST00000549308 COX6CP09669 75 aa7.74□□□□□ -1.17
PTPRR-209ENST00000549308 FUSP35637 526 aaKnown RBP eCLIP7.74□□□□□ -1.17
PTPRR-209ENST00000549308 SMIM11BQ8TCY0 68 aa7.74□□□□□ -1.17
PTPRR-209ENST00000549308 SPCS1Q9Y6A9 102 aa7.74□□□□□ -1.17
PTPRR-209ENST00000549308 SDIM1Q6ZPB5 146 aa7.73□□□□□ -1.17
PTPRR-209ENST00000549308 FAM19A5Q7Z5A7 132 aaPredicted RBP7.73□□□□□ -1.17
PTPRR-209ENST00000549308 GAGE10A6NGK3 116 aa7.72□□□□□ -1.17
PTPRR-209ENST00000549308 RPL28P46779 137 aaKnown RBP7.72□□□□□ -1.17
PTPRR-209ENST00000549308 IGLV5-37A0A075B6J1 123 aa7.71□□□□□ -1.17
PTPRR-209ENST00000549308 TRBV10-3A0A0K0K1G6 114 aa7.71□□□□□ -1.17
PTPRR-209ENST00000549308 K7EP34 96 aa7.71□□□□□ -1.17
PTPRR-209ENST00000549308 CHTF8P0CG12 524 aa7.71□□□□□ -1.17
PTPRR-209ENST00000549308 GTF2H5Q6ZYL4 71 aa7.71□□□□□ -1.17
PTPRR-209ENST00000549308 IGLV6-57P01721 117 aa7.7□□□□□ -1.18
PTPRR-209ENST00000549308 LINC00474Q9P2X8 69 aa7.7□□□□□ -1.18
PTPRR-209ENST00000549308 C22orf24Q9Y442 160 aa7.7□□□□□ -1.18
PTPRR-209ENST00000549308 DNAH2Q9P225 4427 aa7.7□□□□□ -1.18
PTPRR-209ENST00000549308 C7orf33Q8WU49 177 aa7.7□□□□□ -1.18
PTPRR-209ENST00000549308 A0A1W2PNN7 141 aa7.69□□□□□ -1.18
PTPRR-209ENST00000549308 DPH3Q96FX2 82 aa7.69□□□□□ -1.18
PTPRR-209ENST00000549308 TRBV20-1A0A075B6N2 111 aa7.68□□□□□ -1.18
PTPRR-209ENST00000549308 TRAV23DV6A0A075B6W5 121 aa7.68□□□□□ -1.18
PTPRR-209ENST00000549308 M0QXV9 152 aa7.68□□□□□ -1.18
PTPRR-209ENST00000549308 TCL1BO95988 128 aa7.68□□□□□ -1.18
PTPRR-209ENST00000549308 UBE2V1Q13404 147 aa7.68□□□□□ -1.18
PTPRR-209ENST00000549308 KRTAP7-1Q8IUC3 87 aa7.68□□□□□ -1.18
PTPRR-209ENST00000549308 CBY1Q9Y3M2 126 aa7.68□□□□□ -1.18
PTPRR-209ENST00000549308 KRTAP10-2P60368 255 aa7.67□□□□□ -1.18
PTPRR-209ENST00000549308 MRPL55Q7Z7F7 128 aaKnown RBP7.67□□□□□ -1.18
PTPRR-209ENST00000549308 CLEC2BQ92478 149 aa7.67□□□□□ -1.18
PTPRR-209ENST00000549308 DNAH17Q9UFH2 4485 aa7.67□□□□□ -1.18
PTPRR-209ENST00000549308 ATXN8Q156A1 80 aa7.67□□□□□ -1.18
PTPRR-209ENST00000549308 C6orf99Q4VX62 202 aa7.67□□□□□ -1.18
PTPRR-209ENST00000549308 LINC00336Q6ZUF6 198 aa7.67□□□□□ -1.18
PTPRR-209ENST00000549308 LINC00167Q96N53 147 aa7.67□□□□□ -1.18
PTPRR-209ENST00000549308 RPL37AP8A6NKH3 93 aa7.66□□□□□ -1.18
PTPRR-209ENST00000549308 H0YGX0 51 aa7.66□□□□□ -1.18
PTPRR-209ENST00000549308 PANO1I0J062 215 aa7.66□□□□□ -1.18
PTPRR-209ENST00000549308 SPACA4Q8TDM5 124 aa7.66□□□□□ -1.18
PTPRR-209ENST00000549308 DIRC1Q969H9 104 aa7.66□□□□□ -1.18
PTPRR-209ENST00000549308 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.66□□□□□ -1.18
PTPRR-209ENST00000549308 H3BMG7 143 aa7.65□□□□□ -1.18
PTPRR-209ENST00000549308 HYDINQ4G0P3 5121 aa7.65□□□□□ -1.19
PTPRR-209ENST00000549308 IGLV1-50A0A075B6I6 118 aa7.64□□□□□ -1.19
PTPRR-209ENST00000549308 ZNF73O43830 326 aaPredicted RBP7.64□□□□□ -1.19
PTPRR-209ENST00000549308 LST1O00453 97 aa7.63□□□□□ -1.19
PTPRR-209ENST00000549308 PRYO14603 147 aa7.63□□□□□ -1.19
PTPRR-209ENST00000549308 PHF5AQ7RTV0 110 aaKnown RBP7.63□□□□□ -1.19
PTPRR-209ENST00000549308 KCNQ1DNQ9H478 68 aa7.63□□□□□ -1.19
PTPRR-209ENST00000549308 SACSQ9NZJ4 4579 aa7.63□□□□□ -1.19
PTPRR-209ENST00000549308 COX7BP24311 80 aa7.62□□□□□ -1.19
PTPRR-209ENST00000549308 UBE2BP63146 152 aa7.62□□□□□ -1.19
PTPRR-209ENST00000549308 FAM218AQ96MZ4 157 aa7.62□□□□□ -1.19
PTPRR-209ENST00000549308 FRAS1Q86XX4 4008 aa7.61□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 66 ms