RNA–Protein interactions for RNA: ENST00000549271.1

DDX54-206, Transcript of DEAD-box helicase 54, humanhuman

TSL 2

Gene DDX54, Length 756 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-206ENST00000549271 SCO1O75880 301 aa7.18□□□□□ -1.26
DDX54-206ENST00000549271 SERF1AO75920 110 aa7.18□□□□□ -1.26
DDX54-206ENST00000549271 COX17Q14061 63 aa7.18□□□□□ -1.26
DDX54-206ENST00000549271 BCE1O60756 84 aa7.17□□□□□ -1.26
DDX54-206ENST00000549271 VPREB1P12018 145 aa7.17□□□□□ -1.26
DDX54-206ENST00000549271 Q8NDZ9 215 aa7.17□□□□□ -1.26
DDX54-206ENST00000549271 NKAPP1Q8N9T2 125 aa7.16□□□□□ -1.26
DDX54-206ENST00000549271 TSPAN13O95857 204 aa7.15□□□□□ -1.26
DDX54-206ENST00000549271 RPL28P46779 137 aaKnown RBP7.15□□□□□ -1.26
DDX54-206ENST00000549271 SFTA2Q6UW10 78 aa7.15□□□□□ -1.26
DDX54-206ENST00000549271 LEPROTL1O95214 131 aa7.14□□□□□ -1.27
DDX54-206ENST00000549271 KRTAP13-1Q8IUC0 172 aa7.14□□□□□ -1.27
DDX54-206ENST00000549271 IGKV2-28A0A075B6P5 120 aa7.13□□□□□ -1.27
DDX54-206ENST00000549271 A0A087X002 238 aa7.13□□□□□ -1.27
DDX54-206ENST00000549271 H0Y8G0 127 aa7.13□□□□□ -1.27
DDX54-206ENST00000549271 IGKV2D-28P01615 120 aa7.13□□□□□ -1.27
DDX54-206ENST00000549271 CRYGAP11844 174 aa7.13□□□□□ -1.27
DDX54-206ENST00000549271 LINC00158P58513 81 aa7.13□□□□□ -1.27
DDX54-206ENST00000549271 A0A0U1RRA0 63 aa7.12□□□□□ -1.27
DDX54-206ENST00000549271 SMIM13P0DJ93 91 aa7.12□□□□□ -1.27
DDX54-206ENST00000549271 FABP4P15090 132 aa7.12□□□□□ -1.27
DDX54-206ENST00000549271 RPL24P83731 157 aaKnown RBP7.12□□□□□ -1.27
DDX54-206ENST00000549271 HSPB8Q9UJY1 196 aa7.11□□□□□ -1.27
DDX54-206ENST00000549271 TMEM238C9JI98 176 aa7.1□□□□□ -1.27
DDX54-206ENST00000549271 LINC01547P58512 204 aaPredicted RBP7.1□□□□□ -1.27
DDX54-206ENST00000549271 TSPEAR-AS2P59090 65 aa7.1□□□□□ -1.27
DDX54-206ENST00000549271 TPRXLQ17RH7 258 aa7.1□□□□□ -1.27
DDX54-206ENST00000549271 TYMSOSQ8TAI1 123 aa7.1□□□□□ -1.27
DDX54-206ENST00000549271 PMCHL2Q9BQD1 86 aa7.1□□□□□ -1.27
DDX54-206ENST00000549271 NDUFA12Q9UI09 145 aa7.1□□□□□ -1.27
DDX54-206ENST00000549271 M0R378 163 aa7.09□□□□□ -1.27
DDX54-206ENST00000549271 LEPROTO15243 131 aa7.09□□□□□ -1.27
DDX54-206ENST00000549271 UBE2AP49459 152 aa7.09□□□□□ -1.27
DDX54-206ENST00000549271 HERV-K104P63124 156 aa7.09□□□□□ -1.27
DDX54-206ENST00000549271 TMEM126AQ9H061 195 aa7.09□□□□□ -1.27
DDX54-206ENST00000549271 CDIP1Q9H305 208 aa7.09□□□□□ -1.27
DDX54-206ENST00000549271 MYMXA0A1B0GTQ4 84 aa7.08□□□□□ -1.28
DDX54-206ENST00000549271 HIST1H2BKO60814 126 aa7.08□□□□□ -1.28
DDX54-206ENST00000549271 DPM2O94777 84 aa7.08□□□□□ -1.28
DDX54-206ENST00000549271 HIST1H2BJP06899 126 aa7.08□□□□□ -1.28
DDX54-206ENST00000549271 HIST1H2BOP23527 126 aa7.08□□□□□ -1.28
DDX54-206ENST00000549271 PLNP26678 52 aa7.08□□□□□ -1.28
DDX54-206ENST00000549271 HIST1H2BBP33778 126 aa7.08□□□□□ -1.28
DDX54-206ENST00000549271 HIST1H2BDP58876 126 aa7.08□□□□□ -1.28
DDX54-206ENST00000549271 HIST1H2BCP62807 126 aa7.08□□□□□ -1.28
DDX54-206ENST00000549271 HIST2H2BEQ16778 126 aa7.08□□□□□ -1.28
DDX54-206ENST00000549271 FAM229BQ4G0N7 80 aa7.08□□□□□ -1.28
DDX54-206ENST00000549271 MEIG1Q5JSS6 88 aa7.08□□□□□ -1.28
DDX54-206ENST00000549271 HIST2H2BFQ5QNW6 126 aaPredicted RBP7.08□□□□□ -1.28
DDX54-206ENST00000549271 MIR7-3HGQ8N6C7 128 aa7.08□□□□□ -1.28
DDX54-206ENST00000549271 HIST1H2BHQ93079 126 aa7.08□□□□□ -1.28
DDX54-206ENST00000549271 HIST1H2BNQ99877 126 aa7.08□□□□□ -1.28
DDX54-206ENST00000549271 HIST1H2BMQ99879 126 aa7.08□□□□□ -1.28
DDX54-206ENST00000549271 ANAPC11Q9NYG5 84 aa7.08□□□□□ -1.28
DDX54-206ENST00000549271 CTAG1AP78358 180 aa7.07□□□□□ -1.28
DDX54-206ENST00000549271 KRTAP13-2Q52LG2 175 aa7.07□□□□□ -1.28
DDX54-206ENST00000549271 PLEKHB2Q96CS7 222 aa7.07□□□□□ -1.28
DDX54-206ENST00000549271 ATP6V1G1O75348 118 aa7.06□□□□□ -1.28
DDX54-206ENST00000549271 IGKCP01834 107 aa7.06□□□□□ -1.28
DDX54-206ENST00000549271 PRLHP81277 87 aa7.06□□□□□ -1.28
DDX54-206ENST00000549271 FAM19A1Q7Z5A9 133 aa7.06□□□□□ -1.28
DDX54-206ENST00000549271 BOD1L2Q8IYS8 172 aa7.06□□□□□ -1.28
DDX54-206ENST00000549271 LINC00587B1AMM8 73 aa7.05□□□□□ -1.28
DDX54-206ENST00000549271 J3QQQ9 107 aa7.05□□□□□ -1.28
DDX54-206ENST00000549271 RETNLBQ9BQ08 111 aa7.05□□□□□ -1.28
DDX54-206ENST00000549271 MAP1LC3CQ9BXW4 147 aa7.05□□□□□ -1.28
DDX54-206ENST00000549271 LOC107984156A0A0G2JMH3 177 aa7.04□□□□□ -1.28
DDX54-206ENST00000549271 ARL17AQ8IVW1 177 aa7.04□□□□□ -1.28
DDX54-206ENST00000549271 SYS1-DBNDD2H3BUS1 97 aa7.03□□□□□ -1.28
DDX54-206ENST00000549271 NCR3O14931 201 aa7.03□□□□□ -1.28
DDX54-206ENST00000549271 HERVK_113P61574 105 aa7.03□□□□□ -1.28
DDX54-206ENST00000549271 DAND5Q8N907 189 aa7.03□□□□□ -1.28
DDX54-206ENST00000549271 LINC00304Q8N9R0 145 aa7.03□□□□□ -1.28
DDX54-206ENST00000549271 IGKV2D-26A0A0A0MRZ7 120 aa7.02□□□□□ -1.29
DDX54-206ENST00000549271 NMUP48645 174 aa7.02□□□□□ -1.29
DDX54-206ENST00000549271 KCNQ1DNQ9H478 68 aa7.02□□□□□ -1.29
DDX54-206ENST00000549271 KRTAP4-16G5E9R7 235 aaPredicted RBP7.01□□□□□ -1.29
DDX54-206ENST00000549271 LGALS3P17931 250 aaKnown RBP7.01□□□□□ -1.29
DDX54-206ENST00000549271 SPRR1AP35321 89 aa7.01□□□□□ -1.29
DDX54-206ENST00000549271 IGLV7-46A0A075B6I9 117 aa7□□□□□ -1.29
DDX54-206ENST00000549271 TRBV10-3A0A0K0K1G6 114 aa7□□□□□ -1.29
DDX54-206ENST00000549271 KRTAP9-7A8MTY7 169 aa7□□□□□ -1.29
DDX54-206ENST00000549271 E9PLD3 99 aa7□□□□□ -1.29
DDX54-206ENST00000549271 PRYO14603 147 aa7□□□□□ -1.29
DDX54-206ENST00000549271 COA6Q5JTJ3 125 aaKnown RBP7□□□□□ -1.29
DDX54-206ENST00000549271 LINC01545Q5VT33 79 aa7□□□□□ -1.29
DDX54-206ENST00000549271 EIF4EBP3O60516 100 aaPredicted RBP6.99□□□□□ -1.29
DDX54-206ENST00000549271 ADAMTSL4-AS1Q5T5F5 129 aa6.99□□□□□ -1.29
DDX54-206ENST00000549271 LINC00337Q8N6G1 96 aa6.99□□□□□ -1.29
DDX54-206ENST00000549271 HIGD2AQ9BW72 106 aa6.99□□□□□ -1.29
DDX54-206ENST00000549271 KRTAP4-1Q9BYQ7 146 aa6.99□□□□□ -1.29
DDX54-206ENST00000549271 A0A0J9YXY3 114 aa6.98□□□□□ -1.29
DDX54-206ENST00000549271 TRBV10-2A0A0K0K1G8 114 aa6.98□□□□□ -1.29
DDX54-206ENST00000549271 PET117Q6UWS5 81 aa6.98□□□□□ -1.29
DDX54-206ENST00000549271 SOSTDC1Q6X4U4 206 aa6.98□□□□□ -1.29
DDX54-206ENST00000549271 C3orf79P0CE67 100 aa6.97□□□□□ -1.29
DDX54-206ENST00000549271 SPRR4Q96PI1 79 aa6.97□□□□□ -1.29
DDX54-206ENST00000549271 NDUFC2O95298 119 aa6.96□□□□□ -1.3
DDX54-206ENST00000549271 ASB16-AS1Q495Z4 193 aa6.96□□□□□ -1.3
DDX54-206ENST00000549271 C3orf22Q8N5N4 141 aa6.96□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 92.3 ms