RNA–Protein interactions for RNA: ENST00000548877.1

CDX2-202, Transcript of caudal type homeobox 2, humanhuman

TSL 3

Gene CDX2, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDX2-202ENST00000548877 HIST1H4GQ99525 98 aa8.32□□□□□ -1.08
CDX2-202ENST00000548877 TTTY13Q9BZ97 58 aa8.32□□□□□ -1.08
CDX2-202ENST00000548877 TP73-AS1Q9UF72 201 aa8.32□□□□□ -1.08
CDX2-202ENST00000548877 CDKN2A-AS1Q9UH64 79 aa8.32□□□□□ -1.08
CDX2-202ENST00000548877 TMEM238LA0A1B0GVL6 79 aa8.31□□□□□ -1.08
CDX2-202ENST00000548877 A6NJY4 79 aa8.31□□□□□ -1.08
CDX2-202ENST00000548877 CEND1Q8N111 149 aa8.31□□□□□ -1.08
CDX2-202ENST00000548877 LINC01561Q8N1V8 128 aa8.31□□□□□ -1.08
CDX2-202ENST00000548877 SPANXB1Q9NS25 103 aaPredicted RBP8.31□□□□□ -1.08
CDX2-202ENST00000548877 IGLV5-39A0A0G2JS06 123 aa8.3□□□□□ -1.08
CDX2-202ENST00000548877 TMEM238C9JI98 176 aa8.3□□□□□ -1.08
CDX2-202ENST00000548877 PTTG1IPP53801 180 aa8.3□□□□□ -1.08
CDX2-202ENST00000548877 SFTA2Q6UW10 78 aa8.3□□□□□ -1.08
CDX2-202ENST00000548877 NDUFA12Q9UI09 145 aa8.3□□□□□ -1.08
CDX2-202ENST00000548877 LINC00959A0A1B0GUT2 108 aa8.29□□□□□ -1.08
CDX2-202ENST00000548877 SPINK8P0C7L1 97 aa8.29□□□□□ -1.08
CDX2-202ENST00000548877 Q6ZVH6 145 aa8.29□□□□□ -1.08
CDX2-202ENST00000548877 CHCHD10Q8WYQ3 142 aaPredicted RBP8.29□□□□□ -1.08
CDX2-202ENST00000548877 PSORS1C2Q9UIG4 136 aa8.29□□□□□ -1.08
CDX2-202ENST00000548877 TSPEAR-AS2P59090 65 aa8.28□□□□□ -1.08
CDX2-202ENST00000548877 A0A0U1RQV1 116 aa8.27□□□□□ -1.09
CDX2-202ENST00000548877 KRTAP9-6A0A140TA67 174 aa8.27□□□□□ -1.09
CDX2-202ENST00000548877 SMIM1B2RUZ4 78 aa8.27□□□□□ -1.09
CDX2-202ENST00000548877 NDUFA1O15239 70 aa8.27□□□□□ -1.09
CDX2-202ENST00000548877 TIMM17BO60830 172 aa8.27□□□□□ -1.09
CDX2-202ENST00000548877 HERV-K104P63124 156 aa8.27□□□□□ -1.09
CDX2-202ENST00000548877 FOXI1Q12951 378 aa8.27□□□□□ -1.09
CDX2-202ENST00000548877 COPS9Q8WXC6 57 aa8.27□□□□□ -1.09
CDX2-202ENST00000548877 FAT4Q6V0I7 4981 aa8.26□□□□□ -1.09
CDX2-202ENST00000548877 A0A087WZ39 114 aa8.26□□□□□ -1.09
CDX2-202ENST00000548877 IGHV3OR16-9A0A0B4J2B5 98 aa8.26□□□□□ -1.09
CDX2-202ENST00000548877 IGKV3OR2-268A0A0C4DH90 116 aa8.26□□□□□ -1.09
CDX2-202ENST00000548877 SMIM13P0DJ93 91 aa8.26□□□□□ -1.09
CDX2-202ENST00000548877 A0A0J9YXY3 114 aa8.25□□□□□ -1.09
CDX2-202ENST00000548877 A0A1B0GV90 55 aa8.25□□□□□ -1.09
CDX2-202ENST00000548877 LCE2AQ5TA79 106 aaPredicted RBP8.25□□□□□ -1.09
CDX2-202ENST00000548877 CD164L2Q6UWJ8 174 aa8.25□□□□□ -1.09
CDX2-202ENST00000548877 CARD19Q96LW7 228 aa8.25□□□□□ -1.09
CDX2-202ENST00000548877 RPL24P83731 157 aaKnown RBP8.24□□□□□ -1.09
CDX2-202ENST00000548877 IFITM1P13164 125 aa8.23□□□□□ -1.09
CDX2-202ENST00000548877 FXYD2P54710 66 aa8.23□□□□□ -1.09
CDX2-202ENST00000548877 COX7B2Q8TF08 81 aa8.23□□□□□ -1.09
CDX2-202ENST00000548877 SPANXDQ9BXN6 97 aa8.23□□□□□ -1.09
CDX2-202ENST00000548877 SPANXCQ9NY87 97 aa8.23□□□□□ -1.09
CDX2-202ENST00000548877 COX7A2LO14548 114 aa8.22□□□□□ -1.09
CDX2-202ENST00000548877 TAX1BP3O14907 124 aa8.22□□□□□ -1.09
CDX2-202ENST00000548877 XCL1P47992 114 aa8.22□□□□□ -1.09
CDX2-202ENST00000548877 NHP2Q9NX24 153 aaKnown RBP8.22□□□□□ -1.09
CDX2-202ENST00000548877 A0A1B0GWB2 263 aa8.21□□□□□ -1.1
CDX2-202ENST00000548877 A0A1W2PNN7 141 aa8.21□□□□□ -1.1
CDX2-202ENST00000548877 C9orf118A6NHY6 69 aa8.21□□□□□ -1.1
CDX2-202ENST00000548877 APOMO95445 188 aa8.21□□□□□ -1.1
CDX2-202ENST00000548877 PRSS2P07478 247 aa8.21□□□□□ -1.1
CDX2-202ENST00000548877 SYCNQ0VAF6 134 aa8.21□□□□□ -1.1
CDX2-202ENST00000548877 PRR26Q8N8Z3 221 aa8.21□□□□□ -1.1
CDX2-202ENST00000548877 LOC107984640A0A0U1RRK4 108 aa8.2□□□□□ -1.1
CDX2-202ENST00000548877 CXCL5P42830 114 aa8.2□□□□□ -1.1
CDX2-202ENST00000548877 C5orf38Q86SI9 138 aa8.2□□□□□ -1.1
CDX2-202ENST00000548877 Q8IZM0 81 aa8.2□□□□□ -1.1
CDX2-202ENST00000548877 LINC00526Q96FQ7 95 aa8.2□□□□□ -1.1
CDX2-202ENST00000548877 ZNF625Q96I27 306 aaPredicted RBP8.2□□□□□ -1.1
CDX2-202ENST00000548877 PPDPFQ9H3Y8 114 aa8.2□□□□□ -1.1
CDX2-202ENST00000548877 MALP21145 153 aa8.19□□□□□ -1.1
CDX2-202ENST00000548877 DIRC1Q969H9 104 aa8.19□□□□□ -1.1
CDX2-202ENST00000548877 IGLV1-50A0A075B6I6 118 aa8.18□□□□□ -1.1
CDX2-202ENST00000548877 ZNF561-AS1K7EIQ3 104 aa8.18□□□□□ -1.1
CDX2-202ENST00000548877 C6orf226Q5I0X4 101 aa8.18□□□□□ -1.1
CDX2-202ENST00000548877 MEIG1Q5JSS6 88 aa8.18□□□□□ -1.1
CDX2-202ENST00000548877 TOMM7Q9P0U1 55 aa8.18□□□□□ -1.1
CDX2-202ENST00000548877 GAGE2BQ13066 116 aa8.17□□□□□ -1.1
CDX2-202ENST00000548877 VAMP3Q15836 100 aa8.17□□□□□ -1.1
CDX2-202ENST00000548877 C9orf116Q5BN46 136 aaPredicted RBP8.17□□□□□ -1.1
CDX2-202ENST00000548877 C1orf137Q5JT78 98 aa8.17□□□□□ -1.1
CDX2-202ENST00000548877 LITAFQ99732 161 aa8.17□□□□□ -1.1
CDX2-202ENST00000548877 A0A0B4J2C4 111 aa8.16□□□□□ -1.1
CDX2-202ENST00000548877 H0Y9J4 135 aa8.16□□□□□ -1.1
CDX2-202ENST00000548877 IGLV7-43P04211 117 aa8.16□□□□□ -1.1
CDX2-202ENST00000548877 CKS1BP61024 79 aa8.16□□□□□ -1.1
CDX2-202ENST00000548877 LYRM7Q5U5X0 104 aa8.16□□□□□ -1.1
CDX2-202ENST00000548877 MUSTN1Q8IVN3 82 aa8.16□□□□□ -1.1
CDX2-202ENST00000548877 KRTAP1-4P0C5Y4 121 aa8.15□□□□□ -1.1
CDX2-202ENST00000548877 FABP2P12104 132 aa8.15□□□□□ -1.1
CDX2-202ENST00000548877 GTF2H5Q6ZYL4 71 aa8.15□□□□□ -1.1
CDX2-202ENST00000548877 RAB37Q96AX2 223 aa8.15□□□□□ -1.1
CDX2-202ENST00000548877 A4D1N5 150 aa8.14□□□□□ -1.11
CDX2-202ENST00000548877 H3BUT2 72 aa8.14□□□□□ -1.11
CDX2-202ENST00000548877 PRR4Q16378 134 aa8.14□□□□□ -1.11
CDX2-202ENST00000548877 PRO1854Q9UHT4 67 aa8.14□□□□□ -1.11
CDX2-202ENST00000548877 A0A1W2PPM0 123 aa8.13□□□□□ -1.11
CDX2-202ENST00000548877 K7ERJ3 54 aa8.13□□□□□ -1.11
CDX2-202ENST00000548877 COX17Q14061 63 aa8.13□□□□□ -1.11
CDX2-202ENST00000548877 ADAMTSL4-AS1Q5T5F5 129 aa8.13□□□□□ -1.11
CDX2-202ENST00000548877 PHF5AQ7RTV0 110 aaKnown RBP8.13□□□□□ -1.11
CDX2-202ENST00000548877 C2orf48Q96LS8 159 aa8.13□□□□□ -1.11
CDX2-202ENST00000548877 F8WDY8 70 aa8.12□□□□□ -1.11
CDX2-202ENST00000548877 CFC1BP0CG36 223 aa8.12□□□□□ -1.11
CDX2-202ENST00000548877 CFC1P0CG37 223 aa8.12□□□□□ -1.11
CDX2-202ENST00000548877 UBE2V1Q13404 147 aa8.12□□□□□ -1.11
CDX2-202ENST00000548877 RNF151Q2KHN1 245 aa8.12□□□□□ -1.11
CDX2-202ENST00000548877 LINC00308Q8TCZ7 52 aa8.12□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms