RNA–Protein interactions for RNA: ENST00000548771.1

CCDC38-206, Transcript of coiled-coil domain containing 38, humanhuman

TSL 3

Gene CCDC38, Length 470 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-206ENST00000548771 COA4Q9NYJ1 87 aa-0.11□□□□□ -2.43
CCDC38-206ENST00000548771 METTL1Q9UBP6 276 aaKnown RBP-0.11□□□□□ -2.43
CCDC38-206ENST00000548771 RABAC1Q9UI14 185 aa-0.11□□□□□ -2.43
CCDC38-206ENST00000548771 PRO0255Q9UI72 69 aa-0.11□□□□□ -2.43
CCDC38-206ENST00000548771 TRBV20-1A0A075B6N2 111 aa-0.12□□□□□ -2.43
CCDC38-206ENST00000548771 A0A1B0GWA3 101 aa-0.12□□□□□ -2.43
CCDC38-206ENST00000548771 IGLC7A0M8Q6 106 aa-0.12□□□□□ -2.43
CCDC38-206ENST00000548771 TMEM238C9JI98 176 aa-0.12□□□□□ -2.43
CCDC38-206ENST00000548771 NDUFA4O00483 81 aa-0.12□□□□□ -2.43
CCDC38-206ENST00000548771 KPNA4O00629 521 aaPredicted RBP-0.12□□□□□ -2.43
CCDC38-206ENST00000548771 TPST1O60507 370 aa-0.12□□□□□ -2.43
CCDC38-206ENST00000548771 BCE1O60756 84 aa-0.12□□□□□ -2.43
CCDC38-206ENST00000548771 OR2H2O95918 312 aa-0.12□□□□□ -2.43
CCDC38-206ENST00000548771 IFNA1P01562 189 aa-0.12□□□□□ -2.43
CCDC38-206ENST00000548771 HMGN2P05204 90 aaKnown RBP-0.12□□□□□ -2.43
CCDC38-206ENST00000548771 MPC1LP0DKB6 136 aa-0.12□□□□□ -2.43
CCDC38-206ENST00000548771 SNRPFP62306 86 aaKnown RBP-0.12□□□□□ -2.43
CCDC38-206ENST00000548771 WT1-ASQ06250 92 aa-0.12□□□□□ -2.43
CCDC38-206ENST00000548771 H1FX-AS1Q4G0G2 97 aa-0.12□□□□□ -2.43
CCDC38-206ENST00000548771 ATP11AUNQ6ZP68 121 aa-0.12□□□□□ -2.43
CCDC38-206ENST00000548771 WFDC13Q8IUB5 93 aa-0.12□□□□□ -2.43
CCDC38-206ENST00000548771 SREK1IP1Q8N9Q2 155 aaPredicted RBP-0.12□□□□□ -2.43
CCDC38-206ENST00000548771 TMEM35BQ8NCS4 154 aa-0.12□□□□□ -2.43
CCDC38-206ENST00000548771 OR5AK2Q8NH90 309 aa-0.12□□□□□ -2.43
CCDC38-206ENST00000548771 LINC00208Q96KT6 92 aa-0.12□□□□□ -2.43
CCDC38-206ENST00000548771 CARD19Q96LW7 228 aa-0.12□□□□□ -2.43
CCDC38-206ENST00000548771 Q96NJ1 140 aa-0.12□□□□□ -2.43
CCDC38-206ENST00000548771 PCBD2Q9H0N5 130 aa-0.12□□□□□ -2.43
CCDC38-206ENST00000548771 NPVFQ9HCQ7 196 aa-0.12□□□□□ -2.43
CCDC38-206ENST00000548771 UFC1Q9Y3C8 167 aa-0.12□□□□□ -2.43
CCDC38-206ENST00000548771 TRAV36DV7A0A075B6V5 113 aa-0.13□□□□□ -2.43
CCDC38-206ENST00000548771 TRBV7-1A0A0A6YYK4 115 aa-0.13□□□□□ -2.43
CCDC38-206ENST00000548771 TRAV16A0A0A6YYK6 109 aaPredicted RBP-0.13□□□□□ -2.43
CCDC38-206ENST00000548771 TRAV12-3A0A0B4J271 114 aa-0.13□□□□□ -2.43
CCDC38-206ENST00000548771 LOC107984640A0A0U1RRK4 108 aa-0.13□□□□□ -2.43
CCDC38-206ENST00000548771 TMEM30CPA0ZSE6 113 aa-0.13□□□□□ -2.43
CCDC38-206ENST00000548771 BBIP1A8MTZ0 92 aa-0.13□□□□□ -2.43
CCDC38-206ENST00000548771 H3BQV1 296 aa-0.13□□□□□ -2.43
CCDC38-206ENST00000548771 M0R135 149 aa-0.13□□□□□ -2.43
CCDC38-206ENST00000548771 PGRMC1O00264 195 aaKnown RBP-0.13□□□□□ -2.43
CCDC38-206ENST00000548771 HMGN4O00479 90 aa-0.13□□□□□ -2.43
CCDC38-206ENST00000548771 CDC42EP2O14613 210 aa-0.13□□□□□ -2.43
CCDC38-206ENST00000548771 TRACP01848 142 aa-0.13□□□□□ -2.43
CCDC38-206ENST00000548771 CSN2P05814 226 aa-0.13□□□□□ -2.43
CCDC38-206ENST00000548771 S100A6P06703 90 aa-0.13□□□□□ -2.43
CCDC38-206ENST00000548771 SAA1P0DJI8 122 aaPredicted RBP-0.13□□□□□ -2.43
CCDC38-206ENST00000548771 SPRR1BP22528 89 aa-0.13□□□□□ -2.43
CCDC38-206ENST00000548771 ETV6P41212 452 aa-0.13□□□□□ -2.43
CCDC38-206ENST00000548771 UBE2D2P62837 147 aa-0.13□□□□□ -2.43
CCDC38-206ENST00000548771 GNG3P63215 75 aa-0.13□□□□□ -2.43
CCDC38-206ENST00000548771 PLGLAQ15195 96 aa-0.13□□□□□ -2.43
CCDC38-206ENST00000548771 SMIM21Q3B7S5 101 aa-0.13□□□□□ -2.43
CCDC38-206ENST00000548771 PIGYQ3MUY2 71 aa-0.13□□□□□ -2.43
CCDC38-206ENST00000548771 MORN2Q502X0 79 aa-0.13□□□□□ -2.43
CCDC38-206ENST00000548771 CFAP126Q5VTH2 177 aa-0.13□□□□□ -2.43
CCDC38-206ENST00000548771 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa-0.13□□□□□ -2.43
CCDC38-206ENST00000548771 TMEM167AQ8TBQ9 72 aa-0.13□□□□□ -2.43
CCDC38-206ENST00000548771 GINS3Q9BRX5 216 aa-0.13□□□□□ -2.43
CCDC38-206ENST00000548771 LINC00474Q9P2X8 69 aa-0.13□□□□□ -2.43
CCDC38-206ENST00000548771 C6orf48Q9UBA6 75 aa-0.13□□□□□ -2.43
CCDC38-206ENST00000548771 NDUFA12Q9UI09 145 aa-0.13□□□□□ -2.43
CCDC38-206ENST00000548771 TRAPPC2LQ9UL33 140 aa-0.13□□□□□ -2.43
CCDC38-206ENST00000548771 PVALEFA0A1B0GWK0 134 aa-0.14□□□□□ -2.43
CCDC38-206ENST00000548771 E5RI56 91 aa-0.14□□□□□ -2.43
CCDC38-206ENST00000548771 H0YJX3 145 aa-0.14□□□□□ -2.43
CCDC38-206ENST00000548771 H7BYZ3 331 aa-0.14□□□□□ -2.43
CCDC38-206ENST00000548771 IFI6P09912 130 aa-0.14□□□□□ -2.43
CCDC38-206ENST00000548771 IGLC1P0CG04 106 aa-0.14□□□□□ -2.43
CCDC38-206ENST00000548771 NEFHP12036 1026 aa-0.14□□□□□ -2.43
CCDC38-206ENST00000548771 NDUFA6P56556 154 aa-0.14□□□□□ -2.43
CCDC38-206ENST00000548771 PCBD1P61457 104 aa-0.14□□□□□ -2.43
CCDC38-206ENST00000548771 PSPHP78330 225 aa-0.14□□□□□ -2.43
CCDC38-206ENST00000548771 PRCDQ00LT1 54 aa-0.14□□□□□ -2.43
CCDC38-206ENST00000548771 HIST1H1AQ02539 215 aaPredicted RBP-0.14□□□□□ -2.43
CCDC38-206ENST00000548771 Q0VG73 95 aa-0.14□□□□□ -2.43
CCDC38-206ENST00000548771 Q56UQ5 140 aa-0.14□□□□□ -2.43
CCDC38-206ENST00000548771 LINC01590Q5TEZ4 76 aa-0.14□□□□□ -2.43
CCDC38-206ENST00000548771 CSAG1Q6PB30 78 aa-0.14□□□□□ -2.43
CCDC38-206ENST00000548771 DCUN1D2Q6PH85 259 aa-0.14□□□□□ -2.43
CCDC38-206ENST00000548771 Q6ZRX8 168 aa-0.14□□□□□ -2.43
CCDC38-206ENST00000548771 SLC25A26Q70HW3 274 aa-0.14□□□□□ -2.43
CCDC38-206ENST00000548771 C6orf201Q7Z4U5 140 aa-0.14□□□□□ -2.43
CCDC38-206ENST00000548771 TMEM229BQ8NBD8 167 aa-0.14□□□□□ -2.43
CCDC38-206ENST00000548771 OR8J3Q8NGG0 315 aa-0.14□□□□□ -2.43
CCDC38-206ENST00000548771 OR5A2Q8NGI9 324 aa-0.14□□□□□ -2.43
CCDC38-206ENST00000548771 CDC26Q8NHZ8 85 aa-0.14□□□□□ -2.43
CCDC38-206ENST00000548771 ARL11Q969Q4 196 aa-0.14□□□□□ -2.43
CCDC38-206ENST00000548771 BORCS8Q96FH0 119 aa-0.14□□□□□ -2.43
CCDC38-206ENST00000548771 CHMP6Q96FZ7 201 aa-0.14□□□□□ -2.43
CCDC38-206ENST00000548771 CIB3Q96Q77 187 aaPredicted RBP-0.14□□□□□ -2.43
CCDC38-206ENST00000548771 RERGLQ9H628 205 aa-0.14□□□□□ -2.43
CCDC38-206ENST00000548771 LINC00472Q9H8W2 130 aa-0.14□□□□□ -2.43
CCDC38-206ENST00000548771 OTORQ9NRC9 128 aa-0.14□□□□□ -2.43
CCDC38-206ENST00000548771 CRIPTQ9P021 101 aa-0.14□□□□□ -2.43
CCDC38-206ENST00000548771 LAMTOR3Q9UHA4 124 aa-0.14□□□□□ -2.43
CCDC38-206ENST00000548771 ATPIF1Q9UII2 106 aa-0.14□□□□□ -2.43
CCDC38-206ENST00000548771 MPC1Q9Y5U8 109 aa-0.14□□□□□ -2.43
CCDC38-206ENST00000548771 S4R3F8 94 aa-0.14□□□□□ -2.43
CCDC38-206ENST00000548771 TRBV10-1A0A0K0K1A3 114 aa-0.15□□□□□ -2.43
CCDC38-206ENST00000548771 GNG14A0A1W2PPG7 69 aa-0.15□□□□□ -2.43
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms