RNA–Protein interactions for RNA: ENST00000548122.2

PTPRB-206, Transcript of protein tyrosine phosphatase, receptor type B, humanhuman

TSL 2

Gene PTPRB, Length 4,237 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRB-206ENST00000548122 PRO0255Q9UI72 69 aa3.96□□□□□ -1.78
PTPRB-206ENST00000548122 A0A0J9YXV3 536 aa3.95□□□□□ -1.78
PTPRB-206ENST00000548122 H0Y9J4 135 aa3.95□□□□□ -1.78
PTPRB-206ENST00000548122 C1orf158Q8N1D5 194 aa3.95□□□□□ -1.78
PTPRB-206ENST00000548122 SMIM2Q9BVW6 85 aa3.95□□□□□ -1.78
PTPRB-206ENST00000548122 PSPHP1O15172 72 aa3.95□□□□□ -1.78
PTPRB-206ENST00000548122 TIMM21Q9BVV7 248 aa3.95□□□□□ -1.78
PTPRB-206ENST00000548122 TENM1Q9UKZ4 2725 aa3.95□□□□□ -1.78
PTPRB-206ENST00000548122 FLG2Q5D862 2391 aaPredicted RBP3.95□□□□□ -1.78
PTPRB-206ENST00000548122 SPAG11BQ08648 103 aa3.94□□□□□ -1.78
PTPRB-206ENST00000548122 CASC10Q5T4H9 136 aa3.94□□□□□ -1.78
PTPRB-206ENST00000548122 SPAG11AQ6PDA7 123 aa3.94□□□□□ -1.78
PTPRB-206ENST00000548122 EPM2AB3EWF7 344 aa3.94□□□□□ -1.78
PTPRB-206ENST00000548122 ZNF625Q96I27 306 aaPredicted RBP3.94□□□□□ -1.78
PTPRB-206ENST00000548122 CYSTM1Q9H1C7 97 aa3.94□□□□□ -1.78
PTPRB-206ENST00000548122 Q6ZQT7 251 aa3.94□□□□□ -1.78
PTPRB-206ENST00000548122 Q8NAQ8 132 aa3.93□□□□□ -1.78
PTPRB-206ENST00000548122 IGKV3D-7A0A0C4DH55 119 aa3.93□□□□□ -1.78
PTPRB-206ENST00000548122 HIGD2BQ4VC39 106 aa3.93□□□□□ -1.78
PTPRB-206ENST00000548122 Q6ZRU5 148 aa3.93□□□□□ -1.78
PTPRB-206ENST00000548122 TRAV12-1A0A0B4J245 112 aa3.93□□□□□ -1.78
PTPRB-206ENST00000548122 SDHAF1A6NFY7 115 aa3.93□□□□□ -1.78
PTPRB-206ENST00000548122 LINC00269Q8N2A0 174 aa3.93□□□□□ -1.78
PTPRB-206ENST00000548122 ZFAND2AQ8N6M9 145 aa3.93□□□□□ -1.78
PTPRB-206ENST00000548122 A8MUN3 132 aa3.92□□□□□ -1.78
PTPRB-206ENST00000548122 MRPS12O15235 138 aaKnown RBP3.92□□□□□ -1.78
PTPRB-206ENST00000548122 LINC01554Q52M75 96 aa3.92□□□□□ -1.78
PTPRB-206ENST00000548122 POM121L12Q8N7R1 296 aa3.92□□□□□ -1.78
PTPRB-206ENST00000548122 RPL39LQ96EH5 51 aaKnown RBP3.92□□□□□ -1.78
PTPRB-206ENST00000548122 NDUFA12Q9UI09 145 aa3.92□□□□□ -1.78
PTPRB-206ENST00000548122 A0A096LNJ9 63 aa3.92□□□□□ -1.78
PTPRB-206ENST00000548122 TRBV10-2A0A0K0K1G8 114 aa3.92□□□□□ -1.78
PTPRB-206ENST00000548122 GAS8-AS1O95177 125 aa3.92□□□□□ -1.78
PTPRB-206ENST00000548122 RPL28P46779 137 aaKnown RBP3.92□□□□□ -1.78
PTPRB-206ENST00000548122 TRBV10-1A0A0K0K1A3 114 aa3.92□□□□□ -1.78
PTPRB-206ENST00000548122 KLLNB2CW77 178 aa3.92□□□□□ -1.78
PTPRB-206ENST00000548122 IGHV3-30P01768 117 aa3.92□□□□□ -1.78
PTPRB-206ENST00000548122 IGHV3-33P01772 117 aa3.92□□□□□ -1.78
PTPRB-206ENST00000548122 IGHV3-30-3P0DP02 117 aa3.92□□□□□ -1.78
PTPRB-206ENST00000548122 IGHV3-30-5P0DP03 117 aa3.92□□□□□ -1.78
PTPRB-206ENST00000548122 IGHV6-1A0A0B4J1U7 121 aa3.91□□□□□ -1.78
PTPRB-206ENST00000548122 C11orf86A6NJI1 115 aa3.91□□□□□ -1.78
PTPRB-206ENST00000548122 CHTF8P0CG12 524 aa3.91□□□□□ -1.78
PTPRB-206ENST00000548122 CRIP1P50238 77 aa3.91□□□□□ -1.78
PTPRB-206ENST00000548122 LINC01600Q96MT4 127 aa3.91□□□□□ -1.78
PTPRB-206ENST00000548122 DHRS4-AS1Q9P1J3 65 aa3.91□□□□□ -1.78
PTPRB-206ENST00000548122 FBN3Q75N90 2809 aa3.91□□□□□ -1.78
PTPRB-206ENST00000548122 TRBV7-3A0A075B6L6 115 aa3.91□□□□□ -1.78
PTPRB-206ENST00000548122 FAM19A1Q7Z5A9 133 aa3.91□□□□□ -1.78
PTPRB-206ENST00000548122 CAMK2N1Q7Z7J9 78 aa3.91□□□□□ -1.78
PTPRB-206ENST00000548122 C14orf132Q9NPU4 83 aa3.91□□□□□ -1.78
PTPRB-206ENST00000548122 K7EQD1 137 aa3.9□□□□□ -1.78
PTPRB-206ENST00000548122 ZNF80P51504 273 aaPredicted RBP3.9□□□□□ -1.78
PTPRB-206ENST00000548122 TOMM7Q9P0U1 55 aa3.9□□□□□ -1.78
PTPRB-206ENST00000548122 IGKV2D-24A0A075B6R9 120 aa3.9□□□□□ -1.78
PTPRB-206ENST00000548122 IGHV3-38A0A0C4DH36 116 aa3.9□□□□□ -1.78
PTPRB-206ENST00000548122 C1orf134Q5TEV5 83 aa3.9□□□□□ -1.78
PTPRB-206ENST00000548122 LINC00467Q9BRT7 94 aa3.9□□□□□ -1.78
PTPRB-206ENST00000548122 OCR1Q9BZK8 76 aa3.9□□□□□ -1.78
PTPRB-206ENST00000548122 AKAP9Q99996 3911 aa3.9□□□□□ -1.78
PTPRB-206ENST00000548122 ANK3Q12955 4377 aaKnown RBP3.9□□□□□ -1.79
PTPRB-206ENST00000548122 TRBV10-3A0A0K0K1G6 114 aa3.9□□□□□ -1.79
PTPRB-206ENST00000548122 RPL39P62891 51 aaKnown RBP3.9□□□□□ -1.79
PTPRB-206ENST00000548122 PRR9Q5T870 116 aa3.9□□□□□ -1.79
PTPRB-206ENST00000548122 TRBV7-6A0A0J9YX20 115 aa3.9□□□□□ -1.79
PTPRB-206ENST00000548122 TMEM223A0PJW6 202 aa3.9□□□□□ -1.79
PTPRB-206ENST00000548122 RNASE13Q5GAN3 156 aaKnown RBP3.9□□□□□ -1.79
PTPRB-206ENST00000548122 ANGP03950 147 aaKnown RBP3.89□□□□□ -1.79
PTPRB-206ENST00000548122 RNASE3P12724 160 aaKnown RBP3.89□□□□□ -1.79
PTPRB-206ENST00000548122 MIAQ16674 131 aa3.89□□□□□ -1.79
PTPRB-206ENST00000548122 F8WEM9 126 aa3.89□□□□□ -1.79
PTPRB-206ENST00000548122 IGLV2-11P01706 119 aa3.89□□□□□ -1.79
PTPRB-206ENST00000548122 BAALC-AS2P0C853 105 aa3.89□□□□□ -1.79
PTPRB-206ENST00000548122 RNF185Q96GF1 192 aa3.88□□□□□ -1.79
PTPRB-206ENST00000548122 LIMD2Q9BT23 127 aa3.88□□□□□ -1.79
PTPRB-206ENST00000548122 ERC2-IT1O76042 136 aa3.88□□□□□ -1.79
PTPRB-206ENST00000548122 TSPEAR-AS2P59090 65 aa3.88□□□□□ -1.79
PTPRB-206ENST00000548122 CSNK1G2-AS1Q8NCQ2 148 aa3.88□□□□□ -1.79
PTPRB-206ENST00000548122 XAGE1AQ9HD64 81 aa3.88□□□□□ -1.79
PTPRB-206ENST00000548122 IGLV4-3A0A075B6K6 122 aa3.88□□□□□ -1.79
PTPRB-206ENST00000548122 H7C423 109 aa3.88□□□□□ -1.79
PTPRB-206ENST00000548122 GIG44P09565 113 aaPredicted RBP3.88□□□□□ -1.79
PTPRB-206ENST00000548122 LINC00476Q8WZB0 136 aa3.88□□□□□ -1.79
PTPRB-206ENST00000548122 OPRPNQ99935 248 aaPredicted RBP3.87□□□□□ -1.79
PTPRB-206ENST00000548122 ATP11AUNQ6ZP68 121 aa3.87□□□□□ -1.79
PTPRB-206ENST00000548122 SDIM1Q6ZPB5 146 aa3.87□□□□□ -1.79
PTPRB-206ENST00000548122 NEXN-AS1Q8NBZ9 246 aa3.87□□□□□ -1.79
PTPRB-206ENST00000548122 NBEAL2Q6ZNJ1 2754 aa3.87□□□□□ -1.79
PTPRB-206ENST00000548122 IGHV3OR16-9A0A0B4J2B5 98 aa3.87□□□□□ -1.79
PTPRB-206ENST00000548122 LCE6AA0A183 80 aa3.87□□□□□ -1.79
PTPRB-206ENST00000548122 NDUFB1O75438 58 aa3.87□□□□□ -1.79
PTPRB-206ENST00000548122 CLPSL2Q6UWE3 100 aa3.87□□□□□ -1.79
PTPRB-206ENST00000548122 ZNF469Q96JG9 3925 aaPredicted RBP3.87□□□□□ -1.79
PTPRB-206ENST00000548122 UBE2D3P61077 147 aa3.87□□□□□ -1.79
PTPRB-206ENST00000548122 UBE2D2P62837 147 aa3.87□□□□□ -1.79
PTPRB-206ENST00000548122 KLK12Q9UKR0 248 aa3.87□□□□□ -1.79
PTPRB-206ENST00000548122 TRBV6-4A0A1B0GX49 114 aa3.86□□□□□ -1.79
PTPRB-206ENST00000548122 HCG22E2RYF7 251 aa3.86□□□□□ -1.79
PTPRB-206ENST00000548122 ZNF22P17026 224 aaPredicted RBP3.86□□□□□ -1.79
PTPRB-206ENST00000548122 NDUFAF8A1L188 74 aa3.86□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms